Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27550 and BWI76_RS27555 overlap by 20 nucleotides BWI76_RS27555 and BWI76_RS27560 are separated by 50 nucleotides BWI76_RS27560 and BWI76_RS27565 are separated by 80 nucleotides BWI76_RS27565 and BWI76_RS27570 are separated by 11 nucleotides
BWI76_RS27550: BWI76_RS27550 - hypothetical protein, at 5,719,163 to 5,719,837
_RS27550
BWI76_RS27555: BWI76_RS27555 - putative sugar kinase/transcriptional regulator, ATPase domain protein, at 5,719,818 to 5,720,750
_RS27555
BWI76_RS27560: BWI76_RS27560 - hypothetical protein, at 5,720,801 to 5,721,661
_RS27560
BWI76_RS27565: BWI76_RS27565 - sugar aldolase, at 5,721,742 to 5,722,593
_RS27565
BWI76_RS27570: BWI76_RS27570 - phosphotransferase system, fructose-specific IIC component, at 5,722,605 to 5,723,696
_RS27570
Position (kb) 5720
5721
5722 Strain fitness (log2 ratio) -1
0
1
2
3 at 5719.992 kb on - strand, within BWI76_RS27555 at 5720.129 kb on + strand, within BWI76_RS27555 at 5720.144 kb on + strand, within BWI76_RS27555 at 5720.152 kb on - strand, within BWI76_RS27555 at 5720.164 kb on - strand, within BWI76_RS27555 at 5720.240 kb on + strand, within BWI76_RS27555 at 5720.245 kb on + strand at 5720.245 kb on + strand, within BWI76_RS27555 at 5720.253 kb on - strand, within BWI76_RS27555 at 5720.253 kb on - strand, within BWI76_RS27555 at 5720.260 kb on + strand, within BWI76_RS27555 at 5720.278 kb on + strand, within BWI76_RS27555 at 5720.335 kb on + strand, within BWI76_RS27555 at 5720.511 kb on - strand, within BWI76_RS27555 at 5720.548 kb on - strand, within BWI76_RS27555 at 5720.548 kb on - strand, within BWI76_RS27555 at 5720.607 kb on + strand, within BWI76_RS27555 at 5720.613 kb on + strand, within BWI76_RS27555 at 5720.700 kb on + strand at 5720.755 kb on + strand at 5720.803 kb on + strand at 5720.804 kb on + strand at 5720.807 kb on - strand at 5720.811 kb on - strand at 5720.899 kb on + strand, within BWI76_RS27560 at 5721.270 kb on + strand, within BWI76_RS27560 at 5721.325 kb on - strand, within BWI76_RS27560 at 5721.371 kb on + strand, within BWI76_RS27560 at 5721.371 kb on + strand, within BWI76_RS27560 at 5721.388 kb on - strand, within BWI76_RS27560 at 5721.393 kb on - strand, within BWI76_RS27560 at 5721.447 kb on + strand, within BWI76_RS27560 at 5721.457 kb on + strand, within BWI76_RS27560 at 5721.579 kb on - strand at 5721.579 kb on - strand at 5721.693 kb on - strand at 5721.708 kb on - strand at 5721.794 kb on + strand at 5721.807 kb on - strand at 5721.857 kb on + strand at 5721.857 kb on - strand, within BWI76_RS27565 at 5721.867 kb on - strand, within BWI76_RS27565 at 5721.968 kb on - strand, within BWI76_RS27565 at 5722.035 kb on + strand, within BWI76_RS27565 at 5722.056 kb on - strand, within BWI76_RS27565 at 5722.094 kb on + strand, within BWI76_RS27565 at 5722.102 kb on - strand, within BWI76_RS27565 at 5722.102 kb on - strand, within BWI76_RS27565 at 5722.102 kb on - strand, within BWI76_RS27565 at 5722.220 kb on - strand, within BWI76_RS27565 at 5722.307 kb on - strand, within BWI76_RS27565 at 5722.340 kb on + strand, within BWI76_RS27565 at 5722.350 kb on + strand, within BWI76_RS27565 at 5722.450 kb on - strand, within BWI76_RS27565
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 5,719,992 - BWI76_RS27555 0.19 -0.4 5,720,129 + BWI76_RS27555 0.33 +0.8 5,720,144 + BWI76_RS27555 0.35 -0.6 5,720,152 - BWI76_RS27555 0.36 +0.5 5,720,164 - BWI76_RS27555 0.37 -0.1 5,720,240 + BWI76_RS27555 0.45 -0.4 5,720,245 + +3.2 5,720,245 + BWI76_RS27555 0.46 -0.7 5,720,253 - BWI76_RS27555 0.47 -0.2 5,720,253 - BWI76_RS27555 0.47 -0.6 5,720,260 + BWI76_RS27555 0.47 -1.2 5,720,278 + BWI76_RS27555 0.49 -0.2 5,720,335 + BWI76_RS27555 0.55 +0.4 5,720,511 - BWI76_RS27555 0.74 -0.0 5,720,548 - BWI76_RS27555 0.78 -0.2 5,720,548 - BWI76_RS27555 0.78 +2.6 5,720,607 + BWI76_RS27555 0.85 +0.7 5,720,613 + BWI76_RS27555 0.85 -0.2 5,720,700 + +0.7 5,720,755 + -0.4 5,720,803 + +1.2 5,720,804 + +0.4 5,720,807 - -0.3 5,720,811 - -0.3 5,720,899 + BWI76_RS27560 0.11 +1.2 5,721,270 + BWI76_RS27560 0.54 +0.6 5,721,325 - BWI76_RS27560 0.61 -0.9 5,721,371 + BWI76_RS27560 0.66 -1.0 5,721,371 + BWI76_RS27560 0.66 +0.8 5,721,388 - BWI76_RS27560 0.68 -0.1 5,721,393 - BWI76_RS27560 0.69 +0.7 5,721,447 + BWI76_RS27560 0.75 +0.3 5,721,457 + BWI76_RS27560 0.76 +0.1 5,721,579 - -0.1 5,721,579 - +0.4 5,721,693 - +0.8 5,721,708 - -0.3 5,721,794 + -0.7 5,721,807 - +0.0 5,721,857 + +1.2 5,721,857 - BWI76_RS27565 0.13 +0.6 5,721,867 - BWI76_RS27565 0.15 -0.3 5,721,968 - BWI76_RS27565 0.27 +0.6 5,722,035 + BWI76_RS27565 0.34 -0.3 5,722,056 - BWI76_RS27565 0.37 -1.3 5,722,094 + BWI76_RS27565 0.41 +1.0 5,722,102 - BWI76_RS27565 0.42 +0.5 5,722,102 - BWI76_RS27565 0.42 +0.5 5,722,102 - BWI76_RS27565 0.42 -0.5 5,722,220 - BWI76_RS27565 0.56 -1.2 5,722,307 - BWI76_RS27565 0.66 +0.7 5,722,340 + BWI76_RS27565 0.70 +1.6 5,722,350 + BWI76_RS27565 0.71 +0.7 5,722,450 - BWI76_RS27565 0.83 +0.1
Or see this region's nucleotide sequence