Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27455 and BWI76_RS27460 are separated by 112 nucleotides BWI76_RS27460 and BWI76_RS27465 are separated by 108 nucleotides BWI76_RS27465 and BWI76_RS27470 are separated by 109 nucleotides
BWI76_RS27455: BWI76_RS27455 - DUF805 domain-containing protein, at 5,696,752 to 5,697,180
_RS27455
BWI76_RS27460: BWI76_RS27460 - hypothetical protein, at 5,697,293 to 5,697,892
_RS27460
BWI76_RS27465: BWI76_RS27465 - triose-phosphate isomerase, at 5,698,001 to 5,698,768
_RS27465
BWI76_RS27470: BWI76_RS27470 - sodium:sulfate symporter family protein, at 5,698,878 to 5,700,182
_RS27470
Position (kb) 5698
5699 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5697.030 kb on + strand, within BWI76_RS27455 at 5697.168 kb on + strand at 5697.168 kb on + strand at 5697.176 kb on - strand at 5697.176 kb on - strand at 5697.181 kb on + strand at 5697.360 kb on - strand, within BWI76_RS27460 at 5697.457 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.518 kb on + strand, within BWI76_RS27460 at 5697.659 kb on + strand, within BWI76_RS27460 at 5697.673 kb on - strand, within BWI76_RS27460 at 5697.864 kb on + strand at 5697.870 kb on - strand at 5697.921 kb on + strand at 5697.921 kb on + strand at 5697.929 kb on + strand at 5697.941 kb on + strand at 5697.943 kb on + strand at 5698.773 kb on + strand at 5698.902 kb on - strand at 5698.954 kb on + strand at 5699.039 kb on + strand, within BWI76_RS27470 at 5699.065 kb on - strand, within BWI76_RS27470 at 5699.121 kb on + strand, within BWI76_RS27470 at 5699.127 kb on - strand, within BWI76_RS27470 at 5699.407 kb on + strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.566 kb on - strand, within BWI76_RS27470 at 5699.568 kb on + strand, within BWI76_RS27470 at 5699.581 kb on + strand, within BWI76_RS27470 at 5699.617 kb on + strand, within BWI76_RS27470
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 5,697,030 + BWI76_RS27455 0.65 -0.3 5,697,168 + +0.6 5,697,168 + -1.0 5,697,176 - -0.3 5,697,176 - -0.2 5,697,181 + +0.8 5,697,360 - BWI76_RS27460 0.11 -1.9 5,697,457 + BWI76_RS27460 0.27 -0.9 5,697,518 + BWI76_RS27460 0.38 -0.9 5,697,518 + BWI76_RS27460 0.38 -0.4 5,697,659 + BWI76_RS27460 0.61 -1.2 5,697,673 - BWI76_RS27460 0.63 +0.5 5,697,864 + -0.4 5,697,870 - +0.3 5,697,921 + -0.2 5,697,921 + +2.6 5,697,929 + +0.1 5,697,941 + -1.8 5,697,943 + +3.9 5,698,773 + -0.3 5,698,902 - +0.4 5,698,954 + -0.4 5,699,039 + BWI76_RS27470 0.12 +1.1 5,699,065 - BWI76_RS27470 0.14 +1.0 5,699,121 + BWI76_RS27470 0.19 +1.3 5,699,127 - BWI76_RS27470 0.19 -0.1 5,699,407 + BWI76_RS27470 0.41 -0.0 5,699,425 - BWI76_RS27470 0.42 +0.4 5,699,425 - BWI76_RS27470 0.42 -0.0 5,699,566 - BWI76_RS27470 0.53 +0.6 5,699,568 + BWI76_RS27470 0.53 +0.4 5,699,581 + BWI76_RS27470 0.54 -0.4 5,699,617 + BWI76_RS27470 0.57 -0.2
Or see this region's nucleotide sequence