Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18115

Experiment: D-Sorbitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18110 and BWI76_RS18115 are separated by 125 nucleotidesBWI76_RS18115 and BWI76_RS18120 are separated by 65 nucleotides BWI76_RS18110: BWI76_RS18110 - transcriptional regulator HexR, at 3,763,718 to 3,764,587 _RS18110 BWI76_RS18115: BWI76_RS18115 - pyruvate kinase, at 3,764,713 to 3,766,155 _RS18115 BWI76_RS18120: BWI76_RS18120 - lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, at 3,766,221 to 3,767,195 _RS18120 Position (kb) 3764 3765 3766 3767Strain fitness (log2 ratio) -1 0 1at 3763.874 kb on - strand, within BWI76_RS18110at 3764.089 kb on + strand, within BWI76_RS18110at 3764.255 kb on - strand, within BWI76_RS18110at 3764.380 kb on + strand, within BWI76_RS18110at 3764.521 kb on + strandat 3764.529 kb on - strandat 3764.541 kb on - strandat 3764.617 kb on - strandat 3764.817 kb on - strandat 3764.866 kb on + strand, within BWI76_RS18115at 3764.874 kb on - strand, within BWI76_RS18115at 3765.015 kb on - strand, within BWI76_RS18115at 3765.580 kb on + strand, within BWI76_RS18115at 3765.647 kb on - strand, within BWI76_RS18115at 3765.827 kb on + strand, within BWI76_RS18115at 3765.845 kb on - strand, within BWI76_RS18115at 3765.845 kb on - strand, within BWI76_RS18115at 3766.034 kb on + strandat 3766.249 kb on - strandat 3766.257 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Sorbitol (C)
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3,763,874 - BWI76_RS18110 0.18 +0.3
3,764,089 + BWI76_RS18110 0.43 -0.6
3,764,255 - BWI76_RS18110 0.62 +0.6
3,764,380 + BWI76_RS18110 0.76 -0.3
3,764,521 + -0.1
3,764,529 - +1.4
3,764,541 - -0.6
3,764,617 - -0.3
3,764,817 - +0.2
3,764,866 + BWI76_RS18115 0.11 -0.6
3,764,874 - BWI76_RS18115 0.11 +0.4
3,765,015 - BWI76_RS18115 0.21 -0.0
3,765,580 + BWI76_RS18115 0.60 -0.1
3,765,647 - BWI76_RS18115 0.65 +0.3
3,765,827 + BWI76_RS18115 0.77 -0.2
3,765,845 - BWI76_RS18115 0.78 -0.5
3,765,845 - BWI76_RS18115 0.78 +0.1
3,766,034 + +0.3
3,766,249 - +0.8
3,766,257 - +0.2

Or see this region's nucleotide sequence