Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15235 and BWI76_RS15240 are separated by 176 nucleotides BWI76_RS15240 and BWI76_RS15245 are separated by 18 nucleotides
BWI76_RS15235: BWI76_RS15235 - hypothetical protein, at 3,192,793 to 3,194,031
_RS15235
BWI76_RS15240: BWI76_RS15240 - alcohol dehydrogenase, at 3,194,208 to 3,195,353
_RS15240
BWI76_RS15245: BWI76_RS15245 - dihydrodipicolinate synthase family protein, at 3,195,372 to 3,196,256
_RS15245
Position (kb)
3194
3195
3196 Strain fitness (log2 ratio)
-1
0
1
2 at 3193.545 kb on + strand, within BWI76_RS15235 at 3193.586 kb on + strand, within BWI76_RS15235 at 3193.808 kb on - strand, within BWI76_RS15235 at 3194.018 kb on - strand at 3194.366 kb on - strand, within BWI76_RS15240 at 3194.389 kb on - strand, within BWI76_RS15240 at 3194.419 kb on - strand, within BWI76_RS15240 at 3194.522 kb on - strand, within BWI76_RS15240 at 3194.658 kb on - strand, within BWI76_RS15240 at 3195.052 kb on + strand, within BWI76_RS15240 at 3195.225 kb on + strand, within BWI76_RS15240 at 3195.356 kb on - strand at 3195.623 kb on - strand, within BWI76_RS15245 at 3195.702 kb on - strand, within BWI76_RS15245 at 3195.736 kb on - strand, within BWI76_RS15245 at 3195.892 kb on - strand, within BWI76_RS15245 at 3195.930 kb on - strand, within BWI76_RS15245 at 3195.962 kb on + strand, within BWI76_RS15245 at 3196.052 kb on + strand, within BWI76_RS15245 at 3196.074 kb on - strand, within BWI76_RS15245 at 3196.077 kb on + strand, within BWI76_RS15245 at 3196.077 kb on + strand, within BWI76_RS15245 at 3196.077 kb on + strand, within BWI76_RS15245 at 3196.077 kb on + strand, within BWI76_RS15245 at 3196.077 kb on + strand, within BWI76_RS15245 at 3196.085 kb on - strand, within BWI76_RS15245 at 3196.088 kb on - strand, within BWI76_RS15245 at 3196.098 kb on - strand, within BWI76_RS15245 at 3196.173 kb on - strand at 3196.173 kb on - strand at 3196.186 kb on + strand at 3196.191 kb on + strand at 3196.194 kb on - strand at 3196.197 kb on + strand at 3196.198 kb on + strand at 3196.199 kb on - strand at 3196.204 kb on + strand at 3196.205 kb on - strand at 3196.205 kb on - strand at 3196.205 kb on - strand at 3196.212 kb on - strand at 3196.212 kb on - strand at 3196.212 kb on - strand at 3196.351 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 3,193,545 + BWI76_RS15235 0.61 +0.5 3,193,586 + BWI76_RS15235 0.64 -0.9 3,193,808 - BWI76_RS15235 0.82 +0.1 3,194,018 - -0.3 3,194,366 - BWI76_RS15240 0.14 +0.0 3,194,389 - BWI76_RS15240 0.16 +0.3 3,194,419 - BWI76_RS15240 0.18 +0.2 3,194,522 - BWI76_RS15240 0.27 -0.2 3,194,658 - BWI76_RS15240 0.39 +1.8 3,195,052 + BWI76_RS15240 0.74 +0.4 3,195,225 + BWI76_RS15240 0.89 +0.9 3,195,356 - -0.1 3,195,623 - BWI76_RS15245 0.28 +1.6 3,195,702 - BWI76_RS15245 0.37 -0.1 3,195,736 - BWI76_RS15245 0.41 +0.4 3,195,892 - BWI76_RS15245 0.59 +0.3 3,195,930 - BWI76_RS15245 0.63 -0.6 3,195,962 + BWI76_RS15245 0.67 -0.4 3,196,052 + BWI76_RS15245 0.77 +0.0 3,196,074 - BWI76_RS15245 0.79 -0.2 3,196,077 + BWI76_RS15245 0.80 -1.1 3,196,077 + BWI76_RS15245 0.80 +0.1 3,196,077 + BWI76_RS15245 0.80 -0.4 3,196,077 + BWI76_RS15245 0.80 +0.0 3,196,077 + BWI76_RS15245 0.80 -0.4 3,196,085 - BWI76_RS15245 0.81 -0.1 3,196,088 - BWI76_RS15245 0.81 -0.2 3,196,098 - BWI76_RS15245 0.82 +0.3 3,196,173 - -0.4 3,196,173 - -0.3 3,196,186 + -0.5 3,196,191 + +0.4 3,196,194 - -0.8 3,196,197 + -0.3 3,196,198 + +0.8 3,196,199 - +0.1 3,196,204 + -0.4 3,196,205 - -0.2 3,196,205 - +1.0 3,196,205 - -1.1 3,196,212 - +0.2 3,196,212 - -0.3 3,196,212 - -0.5 3,196,351 + +0.9
Or see this region's nucleotide sequence