Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09725 and BWI76_RS09730 are separated by 53 nucleotides BWI76_RS09730 and BWI76_RS09735 are separated by 203 nucleotides BWI76_RS09735 and BWI76_RS09740 are separated by 51 nucleotides
BWI76_RS09725: BWI76_RS09725 - MurR/RpiR family transcriptional regulator, at 2,037,972 to 2,038,829
_RS09725
BWI76_RS09730: BWI76_RS09730 - pyruvate formate lyase 1-activating protein, at 2,038,883 to 2,039,623
_RS09730
BWI76_RS09735: BWI76_RS09735 - formate acetyltransferase, at 2,039,827 to 2,042,109
_RS09735
BWI76_RS09740: BWI76_RS09740 - formate transporter FocA, at 2,042,161 to 2,043,018
_RS09740
Position (kb)
2039
2040
2041
2042
2043 Strain fitness (log2 ratio)
-1
0
1
2 at 2038.881 kb on + strand at 2039.113 kb on - strand, within BWI76_RS09730 at 2039.385 kb on - strand, within BWI76_RS09730 at 2039.572 kb on - strand at 2039.746 kb on - strand at 2039.846 kb on - strand at 2039.846 kb on - strand at 2039.900 kb on + strand at 2040.199 kb on - strand, within BWI76_RS09735 at 2040.336 kb on - strand, within BWI76_RS09735 at 2040.336 kb on - strand, within BWI76_RS09735 at 2040.562 kb on + strand, within BWI76_RS09735 at 2040.717 kb on + strand, within BWI76_RS09735 at 2040.892 kb on + strand, within BWI76_RS09735 at 2041.032 kb on - strand, within BWI76_RS09735 at 2041.073 kb on - strand, within BWI76_RS09735 at 2041.439 kb on - strand, within BWI76_RS09735 at 2041.554 kb on - strand, within BWI76_RS09735 at 2042.081 kb on + strand at 2042.484 kb on + strand, within BWI76_RS09740 at 2042.584 kb on + strand, within BWI76_RS09740 at 2042.672 kb on - strand, within BWI76_RS09740 at 2042.754 kb on + strand, within BWI76_RS09740 at 2042.864 kb on - strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.884 kb on + strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.892 kb on - strand, within BWI76_RS09740 at 2042.900 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.902 kb on - strand, within BWI76_RS09740 at 2042.910 kb on + strand, within BWI76_RS09740 at 2042.976 kb on + strand at 2042.978 kb on + strand at 2043.004 kb on + strand at 2043.018 kb on + strand at 2043.026 kb on - strand at 2043.028 kb on + strand at 2043.030 kb on - strand at 2043.030 kb on - strand at 2043.063 kb on + strand at 2043.063 kb on + strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.071 kb on - strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.088 kb on + strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.096 kb on - strand at 2043.097 kb on - strand at 2043.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 2,038,881 + -1.0 2,039,113 - BWI76_RS09730 0.31 -0.3 2,039,385 - BWI76_RS09730 0.68 +1.1 2,039,572 - +1.2 2,039,746 - -0.2 2,039,846 - -0.1 2,039,846 - +0.4 2,039,900 + +2.6 2,040,199 - BWI76_RS09735 0.16 +0.7 2,040,336 - BWI76_RS09735 0.22 -1.0 2,040,336 - BWI76_RS09735 0.22 +0.2 2,040,562 + BWI76_RS09735 0.32 -0.8 2,040,717 + BWI76_RS09735 0.39 -0.0 2,040,892 + BWI76_RS09735 0.47 -1.7 2,041,032 - BWI76_RS09735 0.53 -0.2 2,041,073 - BWI76_RS09735 0.55 +0.2 2,041,439 - BWI76_RS09735 0.71 -0.4 2,041,554 - BWI76_RS09735 0.76 +0.1 2,042,081 + -0.5 2,042,484 + BWI76_RS09740 0.38 -0.3 2,042,584 + BWI76_RS09740 0.49 -1.2 2,042,672 - BWI76_RS09740 0.60 -0.0 2,042,754 + BWI76_RS09740 0.69 +1.3 2,042,864 - BWI76_RS09740 0.82 +0.3 2,042,884 + BWI76_RS09740 0.84 +1.1 2,042,884 + BWI76_RS09740 0.84 +0.0 2,042,884 + BWI76_RS09740 0.84 +0.5 2,042,884 + BWI76_RS09740 0.84 +0.3 2,042,892 - BWI76_RS09740 0.85 +0.1 2,042,892 - BWI76_RS09740 0.85 +0.4 2,042,892 - BWI76_RS09740 0.85 +0.2 2,042,892 - BWI76_RS09740 0.85 -0.9 2,042,892 - BWI76_RS09740 0.85 -0.4 2,042,900 - BWI76_RS09740 0.86 -0.3 2,042,902 - BWI76_RS09740 0.86 -0.3 2,042,902 - BWI76_RS09740 0.86 -1.0 2,042,910 + BWI76_RS09740 0.87 -0.3 2,042,976 + -0.8 2,042,978 + -0.1 2,043,004 + -0.4 2,043,018 + -0.0 2,043,026 - -0.6 2,043,028 + -0.3 2,043,030 - +0.2 2,043,030 - -0.0 2,043,063 + -0.6 2,043,063 + +1.8 2,043,071 - +0.7 2,043,071 - +0.3 2,043,071 - +0.5 2,043,088 + -0.1 2,043,088 + +0.3 2,043,088 + +0.6 2,043,088 + +0.2 2,043,088 + -0.7 2,043,088 + +0.1 2,043,088 + +2.3 2,043,088 + -0.7 2,043,088 + +0.2 2,043,088 + -0.1 2,043,096 - +0.6 2,043,096 - +1.3 2,043,096 - +0.1 2,043,096 - +0.3 2,043,096 - -1.0 2,043,097 - +0.3 2,043,097 - -0.6
Or see this region's nucleotide sequence