Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31270 and AZOBR_RS31275 are separated by 41 nucleotides AZOBR_RS31275 and AZOBR_RS31280 are separated by 306 nucleotides
AZOBR_RS31270: AZOBR_RS31270 - aldose 1-epimerase, at 381,579 to 382,652
_RS31270
AZOBR_RS31275: AZOBR_RS31275 - altronate oxidoreductase, at 382,694 to 384,199
_RS31275
AZOBR_RS31280: AZOBR_RS31280 - hypothetical protein, at 384,506 to 385,237
_RS31280
Position (kb) 382
383
384
385 Strain fitness (log2 ratio) -2
-1
0
1 at 381.694 kb on - strand, within AZOBR_RS31270 at 381.763 kb on - strand, within AZOBR_RS31270 at 381.822 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.981 kb on + strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 381.982 kb on - strand, within AZOBR_RS31270 at 382.335 kb on + strand, within AZOBR_RS31270 at 382.456 kb on - strand, within AZOBR_RS31270 at 382.456 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.516 kb on - strand, within AZOBR_RS31270 at 382.573 kb on + strand at 382.573 kb on + strand at 382.573 kb on + strand at 382.614 kb on + strand at 382.615 kb on - strand at 382.931 kb on + strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 382.932 kb on - strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.120 kb on + strand, within AZOBR_RS31275 at 383.121 kb on - strand, within AZOBR_RS31275 at 383.379 kb on - strand, within AZOBR_RS31275 at 383.420 kb on + strand, within AZOBR_RS31275 at 383.774 kb on + strand, within AZOBR_RS31275 at 383.774 kb on + strand, within AZOBR_RS31275 at 383.774 kb on + strand, within AZOBR_RS31275 at 383.775 kb on - strand, within AZOBR_RS31275 at 383.856 kb on - strand, within AZOBR_RS31275 at 383.856 kb on - strand, within AZOBR_RS31275 at 383.910 kb on + strand, within AZOBR_RS31275 at 383.911 kb on - strand, within AZOBR_RS31275 at 383.921 kb on + strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 383.922 kb on - strand, within AZOBR_RS31275 at 384.207 kb on - strand at 384.207 kb on - strand at 384.226 kb on - strand at 384.288 kb on + strand at 384.358 kb on - strand at 384.360 kb on - strand at 384.361 kb on + strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.647 kb on + strand, within AZOBR_RS31280 at 384.725 kb on + strand, within AZOBR_RS31280 at 384.725 kb on + strand, within AZOBR_RS31280 at 384.725 kb on + strand, within AZOBR_RS31280 at 384.995 kb on + strand, within AZOBR_RS31280 at 384.996 kb on - strand, within AZOBR_RS31280 at 384.996 kb on - strand, within AZOBR_RS31280 at 385.095 kb on - strand, within AZOBR_RS31280 at 385.095 kb on - strand, within AZOBR_RS31280
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days remove 381,694 - AZOBR_RS31270 0.11 -1.7 381,763 - AZOBR_RS31270 0.17 -1.1 381,822 + AZOBR_RS31270 0.23 -0.6 381,981 + AZOBR_RS31270 0.37 -0.1 381,981 + AZOBR_RS31270 0.37 +0.6 381,981 + AZOBR_RS31270 0.37 -0.7 381,982 - AZOBR_RS31270 0.38 +0.1 381,982 - AZOBR_RS31270 0.38 -0.5 381,982 - AZOBR_RS31270 0.38 +0.5 381,982 - AZOBR_RS31270 0.38 +0.5 382,335 + AZOBR_RS31270 0.70 -0.3 382,456 - AZOBR_RS31270 0.82 -0.5 382,456 - AZOBR_RS31270 0.82 -0.0 382,516 - AZOBR_RS31270 0.87 -0.1 382,516 - AZOBR_RS31270 0.87 -0.1 382,516 - AZOBR_RS31270 0.87 -0.5 382,573 + -0.1 382,573 + -0.8 382,573 + -1.1 382,614 + +0.0 382,615 - +0.7 382,931 + AZOBR_RS31275 0.16 -2.1 382,932 - AZOBR_RS31275 0.16 -1.6 382,932 - AZOBR_RS31275 0.16 +0.1 382,932 - AZOBR_RS31275 0.16 -0.1 383,120 + AZOBR_RS31275 0.28 +0.4 383,120 + AZOBR_RS31275 0.28 -0.8 383,120 + AZOBR_RS31275 0.28 +1.0 383,120 + AZOBR_RS31275 0.28 +0.1 383,121 - AZOBR_RS31275 0.28 -0.1 383,379 - AZOBR_RS31275 0.45 +0.9 383,420 + AZOBR_RS31275 0.48 -0.1 383,774 + AZOBR_RS31275 0.72 +0.5 383,774 + AZOBR_RS31275 0.72 -0.9 383,774 + AZOBR_RS31275 0.72 -0.2 383,775 - AZOBR_RS31275 0.72 -0.5 383,856 - AZOBR_RS31275 0.77 +0.6 383,856 - AZOBR_RS31275 0.77 -0.5 383,910 + AZOBR_RS31275 0.81 -0.1 383,911 - AZOBR_RS31275 0.81 -0.3 383,921 + AZOBR_RS31275 0.81 +0.0 383,922 - AZOBR_RS31275 0.82 -0.5 383,922 - AZOBR_RS31275 0.82 +0.2 383,922 - AZOBR_RS31275 0.82 -0.4 383,922 - AZOBR_RS31275 0.82 -0.2 383,922 - AZOBR_RS31275 0.82 -0.4 383,922 - AZOBR_RS31275 0.82 +0.0 384,207 - -0.1 384,207 - +0.5 384,226 - -0.4 384,288 + -0.0 384,358 - -2.2 384,360 - +0.3 384,361 + -0.9 384,564 - -0.2 384,564 - +1.0 384,564 - -0.0 384,564 - +0.5 384,647 + AZOBR_RS31280 0.19 -2.7 384,725 + AZOBR_RS31280 0.30 +0.1 384,725 + AZOBR_RS31280 0.30 +0.4 384,725 + AZOBR_RS31280 0.30 +0.0 384,995 + AZOBR_RS31280 0.67 -0.0 384,996 - AZOBR_RS31280 0.67 +0.2 384,996 - AZOBR_RS31280 0.67 -0.4 385,095 - AZOBR_RS31280 0.80 -0.4 385,095 - AZOBR_RS31280 0.80 -1.5
Or see this region's nucleotide sequence