Experiment: D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23230 and AZOBR_RS23235 are separated by 40 nucleotides AZOBR_RS23235 and AZOBR_RS23240 are separated by 332 nucleotides
AZOBR_RS23230: AZOBR_RS23230 - hypothetical protein, at 223,978 to 225,396
_RS23230
AZOBR_RS23235: AZOBR_RS23235 - potassium transporter TrkH, at 225,437 to 226,891
_RS23235
AZOBR_RS23240: AZOBR_RS23240 - hypothetical protein, at 227,224 to 227,595
_RS23240
Position (kb) 225
226
227 Strain fitness (log2 ratio) -2
-1
0
1
2 at 224.518 kb on + strand, within AZOBR_RS23230 at 224.518 kb on + strand, within AZOBR_RS23230 at 224.519 kb on - strand, within AZOBR_RS23230 at 224.519 kb on - strand, within AZOBR_RS23230 at 224.519 kb on - strand, within AZOBR_RS23230 at 224.551 kb on + strand, within AZOBR_RS23230 at 224.551 kb on + strand, within AZOBR_RS23230 at 224.552 kb on - strand, within AZOBR_RS23230 at 224.552 kb on - strand, within AZOBR_RS23230 at 224.552 kb on - strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.713 kb on + strand, within AZOBR_RS23230 at 224.714 kb on - strand, within AZOBR_RS23230 at 224.714 kb on - strand, within AZOBR_RS23230 at 224.714 kb on - strand, within AZOBR_RS23230 at 224.714 kb on - strand, within AZOBR_RS23230 at 224.714 kb on - strand, within AZOBR_RS23230 at 224.716 kb on + strand, within AZOBR_RS23230 at 224.717 kb on - strand, within AZOBR_RS23230 at 224.717 kb on - strand, within AZOBR_RS23230 at 225.256 kb on + strand at 225.256 kb on + strand at 225.549 kb on + strand at 225.550 kb on - strand at 225.688 kb on - strand at 225.747 kb on + strand, within AZOBR_RS23235 at 225.747 kb on + strand, within AZOBR_RS23235 at 225.748 kb on - strand, within AZOBR_RS23235 at 225.748 kb on - strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.777 kb on + strand, within AZOBR_RS23235 at 225.778 kb on - strand, within AZOBR_RS23235 at 225.778 kb on - strand, within AZOBR_RS23235 at 225.921 kb on + strand, within AZOBR_RS23235 at 225.921 kb on + strand, within AZOBR_RS23235 at 225.936 kb on + strand, within AZOBR_RS23235 at 226.066 kb on - strand, within AZOBR_RS23235 at 226.288 kb on - strand, within AZOBR_RS23235 at 226.288 kb on - strand, within AZOBR_RS23235 at 226.326 kb on + strand, within AZOBR_RS23235 at 226.326 kb on + strand, within AZOBR_RS23235 at 226.326 kb on + strand, within AZOBR_RS23235 at 226.327 kb on - strand, within AZOBR_RS23235 at 226.581 kb on + strand, within AZOBR_RS23235 at 226.903 kb on - strand at 226.923 kb on + strand at 226.923 kb on + strand at 226.923 kb on + strand at 226.924 kb on - strand at 227.051 kb on + strand at 227.051 kb on + strand at 227.104 kb on + strand at 227.608 kb on - strand at 227.608 kb on - strand at 227.640 kb on - strand at 227.704 kb on + strand at 227.704 kb on + strand at 227.704 kb on + strand at 227.705 kb on - strand at 227.757 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days remove 224,518 + AZOBR_RS23230 0.38 +0.1 224,518 + AZOBR_RS23230 0.38 +1.3 224,519 - AZOBR_RS23230 0.38 -0.3 224,519 - AZOBR_RS23230 0.38 -0.2 224,519 - AZOBR_RS23230 0.38 +0.5 224,551 + AZOBR_RS23230 0.40 +0.5 224,551 + AZOBR_RS23230 0.40 +0.6 224,552 - AZOBR_RS23230 0.40 -0.3 224,552 - AZOBR_RS23230 0.40 +1.7 224,552 - AZOBR_RS23230 0.40 +0.5 224,713 + AZOBR_RS23230 0.52 -0.1 224,713 + AZOBR_RS23230 0.52 +2.3 224,713 + AZOBR_RS23230 0.52 -0.2 224,713 + AZOBR_RS23230 0.52 +0.1 224,713 + AZOBR_RS23230 0.52 +0.2 224,713 + AZOBR_RS23230 0.52 +0.6 224,713 + AZOBR_RS23230 0.52 +0.2 224,714 - AZOBR_RS23230 0.52 -0.7 224,714 - AZOBR_RS23230 0.52 +1.3 224,714 - AZOBR_RS23230 0.52 -0.2 224,714 - AZOBR_RS23230 0.52 +1.4 224,714 - AZOBR_RS23230 0.52 -0.3 224,716 + AZOBR_RS23230 0.52 +0.3 224,717 - AZOBR_RS23230 0.52 -1.8 224,717 - AZOBR_RS23230 0.52 +0.6 225,256 + +0.8 225,256 + +1.0 225,549 + -0.2 225,550 - +2.0 225,688 - +1.0 225,747 + AZOBR_RS23235 0.21 +0.3 225,747 + AZOBR_RS23235 0.21 +0.5 225,748 - AZOBR_RS23235 0.21 +0.9 225,748 - AZOBR_RS23235 0.21 +0.4 225,777 + AZOBR_RS23235 0.23 +0.7 225,777 + AZOBR_RS23235 0.23 +0.6 225,777 + AZOBR_RS23235 0.23 +1.3 225,777 + AZOBR_RS23235 0.23 +0.5 225,777 + AZOBR_RS23235 0.23 -0.6 225,777 + AZOBR_RS23235 0.23 +0.4 225,778 - AZOBR_RS23235 0.23 -1.8 225,778 - AZOBR_RS23235 0.23 -1.4 225,921 + AZOBR_RS23235 0.33 +1.0 225,921 + AZOBR_RS23235 0.33 +0.6 225,936 + AZOBR_RS23235 0.34 +1.0 226,066 - AZOBR_RS23235 0.43 +0.7 226,288 - AZOBR_RS23235 0.58 +0.5 226,288 - AZOBR_RS23235 0.58 +0.0 226,326 + AZOBR_RS23235 0.61 -0.8 226,326 + AZOBR_RS23235 0.61 -0.0 226,326 + AZOBR_RS23235 0.61 +1.4 226,327 - AZOBR_RS23235 0.61 -0.6 226,581 + AZOBR_RS23235 0.79 +0.6 226,903 - +1.0 226,923 + +1.5 226,923 + +0.8 226,923 + +0.4 226,924 - -2.4 227,051 + +0.4 227,051 + -0.3 227,104 + -2.1 227,608 - +0.1 227,608 - -1.0 227,640 - +0.7 227,704 + +0.7 227,704 + +0.1 227,704 + -0.4 227,705 - -0.7 227,757 + +0.2
Or see this region's nucleotide sequence