Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_673 and Pf1N1B4_674 are separated by 208 nucleotides Pf1N1B4_674 and Pf1N1B4_675 are separated by 854 nucleotides
Pf1N1B4_673 - MoxR-like ATPases, at 769,733 to 770,734
_673
Pf1N1B4_674 - POSSIBLE CONSERVED MEMBRANE PROTEIN, at 770,943 to 772,274
_674
Pf1N1B4_675 - hypothetical protein, at 773,129 to 773,347
_675
Position (kb) 770
771
772
773 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 770.031 kb on - strand, within Pf1N1B4_673 at 770.077 kb on + strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.246 kb on + strand, within Pf1N1B4_673 at 770.247 kb on - strand, within Pf1N1B4_673 at 770.466 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.817 kb on - strand at 770.846 kb on + strand at 770.895 kb on - strand at 770.895 kb on - strand at 771.146 kb on + strand, within Pf1N1B4_674 at 771.147 kb on - strand at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.185 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.394 kb on + strand, within Pf1N1B4_674 at 771.395 kb on - strand, within Pf1N1B4_674 at 771.421 kb on + strand at 771.421 kb on + strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.462 kb on + strand, within Pf1N1B4_674 at 771.462 kb on + strand at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand at 771.640 kb on - strand, within Pf1N1B4_674 at 771.640 kb on - strand, within Pf1N1B4_674 at 771.759 kb on + strand, within Pf1N1B4_674 at 771.759 kb on + strand, within Pf1N1B4_674 at 771.759 kb on + strand at 771.876 kb on + strand, within Pf1N1B4_674 at 771.877 kb on - strand, within Pf1N1B4_674 at 771.909 kb on + strand at 771.931 kb on + strand, within Pf1N1B4_674 at 772.096 kb on + strand, within Pf1N1B4_674 at 772.122 kb on + strand, within Pf1N1B4_674 at 772.123 kb on - strand, within Pf1N1B4_674 at 772.123 kb on - strand, within Pf1N1B4_674 at 772.140 kb on + strand, within Pf1N1B4_674 at 772.140 kb on + strand, within Pf1N1B4_674 at 772.141 kb on - strand at 772.142 kb on + strand at 772.142 kb on + strand at 772.143 kb on - strand at 772.143 kb on - strand at 772.143 kb on - strand at 772.143 kb on - strand at 772.143 kb on - strand at 772.150 kb on + strand at 772.150 kb on + strand at 772.150 kb on + strand at 772.243 kb on - strand at 772.244 kb on + strand at 772.244 kb on + strand at 772.245 kb on - strand at 772.272 kb on + strand at 772.272 kb on + strand at 772.273 kb on - strand at 772.287 kb on + strand at 772.294 kb on + strand at 772.295 kb on - strand at 772.309 kb on - strand at 772.314 kb on + strand at 772.314 kb on + strand at 772.315 kb on - strand at 772.315 kb on - strand at 772.315 kb on - strand at 772.331 kb on + strand at 772.332 kb on - strand at 772.332 kb on - strand at 772.332 kb on - strand at 772.332 kb on - strand at 772.332 kb on - strand at 772.337 kb on + strand at 772.337 kb on + strand at 772.338 kb on - strand at 772.338 kb on - strand at 772.338 kb on - strand at 772.338 kb on - strand at 772.355 kb on - strand at 772.359 kb on - strand at 772.359 kb on - strand at 772.388 kb on + strand at 772.388 kb on + strand at 772.395 kb on - strand at 772.395 kb on - strand at 772.428 kb on + strand at 772.429 kb on - strand at 772.485 kb on + strand at 772.597 kb on + strand at 772.651 kb on + strand at 772.652 kb on - strand at 772.672 kb on + strand at 772.672 kb on + strand at 772.672 kb on + strand at 772.673 kb on - strand at 772.673 kb on - strand at 772.716 kb on + strand at 772.717 kb on - strand at 772.717 kb on - strand at 772.720 kb on - strand at 772.734 kb on - strand at 772.748 kb on - strand at 772.825 kb on - strand at 772.852 kb on + strand at 772.852 kb on + strand at 772.852 kb on + strand at 772.852 kb on + strand at 772.852 kb on + strand at 772.894 kb on + strand at 772.894 kb on + strand at 772.894 kb on + strand at 772.894 kb on + strand at 772.894 kb on + strand at 772.895 kb on - strand at 772.895 kb on - strand at 772.895 kb on - strand at 772.895 kb on - strand at 772.895 kb on - strand at 772.922 kb on + strand at 773.066 kb on + strand at 773.067 kb on - strand at 773.086 kb on + strand at 773.187 kb on - strand, within Pf1N1B4_675 at 773.187 kb on - strand, within Pf1N1B4_675 at 773.187 kb on - strand, within Pf1N1B4_675 at 773.274 kb on - strand, within Pf1N1B4_675 at 773.274 kb on - strand, within Pf1N1B4_675 at 773.274 kb on - strand, within Pf1N1B4_675
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 770,031 - Pf1N1B4_673 0.30 -0.7 770,077 + Pf1N1B4_673 0.34 +1.1 770,078 - Pf1N1B4_673 0.34 +1.0 770,078 - Pf1N1B4_673 0.34 +0.4 770,246 + Pf1N1B4_673 0.51 -0.0 770,247 - Pf1N1B4_673 0.51 -0.4 770,466 - Pf1N1B4_673 0.73 -1.7 770,548 - Pf1N1B4_673 0.81 +2.8 770,548 - Pf1N1B4_673 0.81 +0.8 770,817 - +2.0 770,846 + +0.6 770,895 - +1.0 770,895 - -1.0 771,146 + Pf1N1B4_674 0.15 -0.5 771,147 - -1.0 771,147 - Pf1N1B4_674 0.15 +0.3 771,147 - Pf1N1B4_674 0.15 +0.5 771,147 - Pf1N1B4_674 0.15 -1.0 771,185 - Pf1N1B4_674 0.18 +1.6 771,227 - Pf1N1B4_674 0.21 -1.0 771,227 - Pf1N1B4_674 0.21 -0.6 771,227 - Pf1N1B4_674 0.21 +0.6 771,227 - Pf1N1B4_674 0.21 +0.9 771,227 - Pf1N1B4_674 0.21 -0.0 771,227 - Pf1N1B4_674 0.21 +0.9 771,227 - Pf1N1B4_674 0.21 +0.4 771,394 + Pf1N1B4_674 0.34 +1.0 771,395 - Pf1N1B4_674 0.34 +1.6 771,421 + -1.0 771,421 + Pf1N1B4_674 0.36 +1.3 771,422 - Pf1N1B4_674 0.36 +0.2 771,422 - Pf1N1B4_674 0.36 +1.7 771,462 + Pf1N1B4_674 0.39 +1.3 771,462 + -0.0 771,639 + Pf1N1B4_674 0.52 +0.5 771,639 + Pf1N1B4_674 0.52 +1.0 771,639 + -2.0 771,640 - Pf1N1B4_674 0.52 -0.4 771,640 - Pf1N1B4_674 0.52 +1.6 771,759 + Pf1N1B4_674 0.61 +0.6 771,759 + Pf1N1B4_674 0.61 -0.0 771,759 + -1.0 771,876 + Pf1N1B4_674 0.70 +2.0 771,877 - Pf1N1B4_674 0.70 -0.4 771,909 + -1.0 771,931 + Pf1N1B4_674 0.74 +0.6 772,096 + Pf1N1B4_674 0.87 +0.3 772,122 + Pf1N1B4_674 0.89 +1.6 772,123 - Pf1N1B4_674 0.89 +1.6 772,123 - Pf1N1B4_674 0.89 +2.2 772,140 + Pf1N1B4_674 0.90 +0.6 772,140 + Pf1N1B4_674 0.90 -1.6 772,141 - +1.0 772,142 + +0.2 772,142 + +1.6 772,143 - +0.3 772,143 - +0.6 772,143 - -0.7 772,143 - +0.6 772,143 - +0.3 772,150 + +1.3 772,150 + -0.5 772,150 + -1.0 772,243 - -1.6 772,244 + +0.5 772,244 + +0.1 772,245 - -0.3 772,272 + -0.4 772,272 + -0.3 772,273 - -0.5 772,287 + -0.2 772,294 + +0.1 772,295 - -1.6 772,309 - -0.2 772,314 + +2.2 772,314 + +0.6 772,315 - -0.3 772,315 - -0.4 772,315 - -0.5 772,331 + +0.3 772,332 - +1.3 772,332 - +0.6 772,332 - +1.0 772,332 - -0.3 772,332 - +0.7 772,337 + +1.6 772,337 + -0.4 772,338 - +1.6 772,338 - +0.2 772,338 - -0.8 772,338 - -0.7 772,355 - +1.6 772,359 - -0.0 772,359 - +0.6 772,388 + -0.0 772,388 + +0.6 772,395 - +2.8 772,395 - +1.8 772,428 + +2.2 772,429 - +1.0 772,485 + -0.4 772,597 + -0.0 772,651 + -0.3 772,652 - -0.3 772,672 + +1.8 772,672 + +2.0 772,672 + +1.3 772,673 - +0.7 772,673 - -0.1 772,716 + +2.0 772,717 - +0.4 772,717 - +0.7 772,720 - +1.0 772,734 - -2.0 772,748 - -0.4 772,825 - +1.6 772,852 + +0.8 772,852 + -0.6 772,852 + +0.2 772,852 + -1.6 772,852 + -1.0 772,894 + +1.6 772,894 + -2.6 772,894 + +3.0 772,894 + +1.3 772,894 + +0.8 772,895 - -0.0 772,895 - -0.0 772,895 - -1.6 772,895 - -3.0 772,895 - +0.2 772,922 + -0.0 773,066 + +0.4 773,067 - +1.0 773,086 + +0.3 773,187 - Pf1N1B4_675 0.26 +0.8 773,187 - Pf1N1B4_675 0.26 -1.6 773,187 - Pf1N1B4_675 0.26 +0.1 773,274 - Pf1N1B4_675 0.66 +1.3 773,274 - Pf1N1B4_675 0.66 +1.3 773,274 - Pf1N1B4_675 0.66 +2.0
Or see this region's nucleotide sequence