Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3387 and Dsui_3388 are separated by 222 nucleotides Dsui_3388 and Dsui_3389 are separated by 135 nucleotides Dsui_3389 and Dsui_3390 are separated by 19 nucleotides
Dsui_3387: Dsui_3387 - histidine kinase,histidine kinase,MASE1-containing protein, at 3,630,400 to 3,632,037
_3387
Dsui_3388: Dsui_3388 - hypothetical protein, at 3,632,260 to 3,633,627
_3388
Dsui_3389: Dsui_3389 - enoyl-CoA hydratase/carnithine racemase, at 3,633,763 to 3,634,542
_3389
Dsui_3390: Dsui_3390 - hypothetical protein, at 3,634,562 to 3,635,101
_3390
Position (kb)
3632
3633
3634 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3632.073 kb on - strand at 3632.164 kb on + strand at 3632.164 kb on + strand at 3632.169 kb on + strand at 3632.177 kb on - strand at 3632.266 kb on - strand at 3632.432 kb on + strand, within Dsui_3388 at 3632.482 kb on + strand, within Dsui_3388 at 3632.518 kb on + strand, within Dsui_3388 at 3632.521 kb on - strand, within Dsui_3388 at 3632.521 kb on - strand, within Dsui_3388 at 3632.545 kb on - strand, within Dsui_3388 at 3632.586 kb on - strand, within Dsui_3388 at 3632.612 kb on - strand, within Dsui_3388 at 3632.686 kb on + strand, within Dsui_3388 at 3632.726 kb on + strand, within Dsui_3388 at 3632.817 kb on + strand, within Dsui_3388 at 3632.845 kb on + strand, within Dsui_3388 at 3632.853 kb on - strand, within Dsui_3388 at 3632.927 kb on + strand, within Dsui_3388 at 3632.937 kb on + strand, within Dsui_3388 at 3633.010 kb on - strand, within Dsui_3388 at 3633.043 kb on - strand, within Dsui_3388 at 3633.049 kb on + strand, within Dsui_3388 at 3633.054 kb on + strand at 3633.057 kb on - strand, within Dsui_3388 at 3633.157 kb on - strand, within Dsui_3388 at 3633.192 kb on + strand, within Dsui_3388 at 3633.264 kb on + strand, within Dsui_3388 at 3633.271 kb on + strand, within Dsui_3388 at 3633.369 kb on + strand at 3633.383 kb on - strand, within Dsui_3388 at 3633.407 kb on + strand, within Dsui_3388 at 3633.415 kb on - strand, within Dsui_3388 at 3633.415 kb on - strand, within Dsui_3388 at 3633.453 kb on + strand, within Dsui_3388 at 3633.466 kb on + strand, within Dsui_3388 at 3633.471 kb on + strand at 3633.508 kb on + strand at 3633.539 kb on - strand at 3633.632 kb on - strand at 3633.740 kb on - strand at 3633.956 kb on + strand, within Dsui_3389 at 3634.002 kb on - strand, within Dsui_3389 at 3634.063 kb on - strand, within Dsui_3389 at 3634.073 kb on - strand at 3634.120 kb on + strand, within Dsui_3389 at 3634.181 kb on + strand, within Dsui_3389 at 3634.203 kb on - strand, within Dsui_3389 at 3634.346 kb on - strand, within Dsui_3389 at 3634.453 kb on - strand, within Dsui_3389 at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.465 kb on + strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.473 kb on - strand at 3634.529 kb on + strand at 3634.529 kb on + strand at 3634.542 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 3,632,073 - -1.3 3,632,164 + +0.7 3,632,164 + -0.3 3,632,169 + -0.9 3,632,177 - -1.6 3,632,266 - +1.7 3,632,432 + Dsui_3388 0.13 -0.3 3,632,482 + Dsui_3388 0.16 -1.3 3,632,518 + Dsui_3388 0.19 -0.9 3,632,521 - Dsui_3388 0.19 -1.9 3,632,521 - Dsui_3388 0.19 +0.3 3,632,545 - Dsui_3388 0.21 +0.3 3,632,586 - Dsui_3388 0.24 -0.9 3,632,612 - Dsui_3388 0.26 +0.1 3,632,686 + Dsui_3388 0.31 +0.7 3,632,726 + Dsui_3388 0.34 -0.3 3,632,817 + Dsui_3388 0.41 -1.3 3,632,845 + Dsui_3388 0.43 -1.6 3,632,853 - Dsui_3388 0.43 -1.3 3,632,927 + Dsui_3388 0.49 +0.7 3,632,937 + Dsui_3388 0.49 -0.9 3,633,010 - Dsui_3388 0.55 -0.9 3,633,043 - Dsui_3388 0.57 +0.7 3,633,049 + Dsui_3388 0.58 +0.7 3,633,054 + -0.3 3,633,057 - Dsui_3388 0.58 -0.5 3,633,157 - Dsui_3388 0.66 +0.7 3,633,192 + Dsui_3388 0.68 -0.3 3,633,264 + Dsui_3388 0.73 +0.7 3,633,271 + Dsui_3388 0.74 +0.7 3,633,369 + -1.6 3,633,383 - Dsui_3388 0.82 -2.9 3,633,407 + Dsui_3388 0.84 -0.3 3,633,415 - Dsui_3388 0.84 -1.6 3,633,415 - Dsui_3388 0.84 -1.9 3,633,453 + Dsui_3388 0.87 -1.3 3,633,466 + Dsui_3388 0.88 -0.3 3,633,471 + -0.3 3,633,508 + -1.9 3,633,539 - -0.3 3,633,632 - -0.3 3,633,740 - +0.7 3,633,956 + Dsui_3389 0.25 -2.3 3,634,002 - Dsui_3389 0.31 +0.7 3,634,063 - Dsui_3389 0.38 +0.7 3,634,073 - +0.7 3,634,120 + Dsui_3389 0.46 -0.3 3,634,181 + Dsui_3389 0.54 -1.6 3,634,203 - Dsui_3389 0.56 -2.1 3,634,346 - Dsui_3389 0.75 +0.7 3,634,453 - Dsui_3389 0.88 -0.3 3,634,465 + +0.7 3,634,465 + +0.7 3,634,465 + -0.3 3,634,465 + +0.7 3,634,465 + +0.7 3,634,465 + +0.7 3,634,473 - -0.3 3,634,473 - +0.7 3,634,473 - -1.6 3,634,473 - -0.6 3,634,473 - +1.7 3,634,473 - +0.7 3,634,473 - -0.9 3,634,473 - -1.3 3,634,473 - +0.7 3,634,529 + -1.3 3,634,529 + -0.3 3,634,542 + -0.9
Or see this region's nucleotide sequence