Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3294 and Dsui_3295 are separated by 138 nucleotides Dsui_3295 and Dsui_3296 are separated by 371 nucleotides
Dsui_3294: Dsui_3294 - isocitrate dehydrogenase kinase/phosphatase, at 3,533,484 to 3,535,331
_3294
Dsui_3295: Dsui_3295 - isocitrate dehydrogenase, NADP-dependent, monomeric type, at 3,535,470 to 3,537,710
_3295
Dsui_3296: Dsui_3296 - isocitrate dehydrogenase, NADP-dependent, prokaryotic type, at 3,538,082 to 3,539,308
_3296
Position (kb)
3535
3536
3537
3538 Strain fitness (log2 ratio)
-2
-1
0
1 at 3534.476 kb on - strand, within Dsui_3294 at 3534.499 kb on + strand, within Dsui_3294 at 3534.525 kb on + strand, within Dsui_3294 at 3534.543 kb on + strand, within Dsui_3294 at 3534.565 kb on + strand at 3534.567 kb on - strand, within Dsui_3294 at 3534.636 kb on - strand, within Dsui_3294 at 3534.641 kb on - strand, within Dsui_3294 at 3534.800 kb on + strand, within Dsui_3294 at 3534.800 kb on + strand, within Dsui_3294 at 3534.800 kb on + strand at 3534.803 kb on - strand, within Dsui_3294 at 3534.808 kb on - strand, within Dsui_3294 at 3534.808 kb on - strand, within Dsui_3294 at 3534.813 kb on - strand, within Dsui_3294 at 3534.848 kb on + strand at 3534.856 kb on - strand, within Dsui_3294 at 3534.900 kb on + strand at 3534.908 kb on - strand, within Dsui_3294 at 3534.922 kb on + strand, within Dsui_3294 at 3534.941 kb on - strand, within Dsui_3294 at 3534.945 kb on + strand, within Dsui_3294 at 3534.976 kb on + strand at 3534.984 kb on - strand, within Dsui_3294 at 3534.994 kb on - strand, within Dsui_3294 at 3535.014 kb on - strand at 3535.017 kb on + strand, within Dsui_3294 at 3535.019 kb on - strand, within Dsui_3294 at 3535.058 kb on + strand, within Dsui_3294 at 3535.066 kb on - strand, within Dsui_3294 at 3535.104 kb on + strand at 3535.107 kb on - strand, within Dsui_3294 at 3535.107 kb on - strand, within Dsui_3294 at 3535.109 kb on - strand, within Dsui_3294 at 3535.155 kb on + strand at 3535.171 kb on + strand at 3535.324 kb on + strand at 3535.324 kb on + strand at 3535.326 kb on - strand at 3535.328 kb on - strand at 3535.332 kb on - strand at 3535.336 kb on - strand at 3535.453 kb on + strand at 3535.462 kb on + strand at 3535.462 kb on + strand at 3535.462 kb on + strand at 3535.509 kb on + strand at 3535.751 kb on + strand, within Dsui_3295 at 3535.784 kb on + strand, within Dsui_3295 at 3535.784 kb on + strand, within Dsui_3295 at 3535.847 kb on - strand at 3535.860 kb on + strand, within Dsui_3295 at 3536.003 kb on + strand, within Dsui_3295 at 3536.285 kb on + strand, within Dsui_3295 at 3536.561 kb on + strand, within Dsui_3295 at 3536.884 kb on + strand, within Dsui_3295 at 3537.137 kb on + strand, within Dsui_3295 at 3537.316 kb on + strand, within Dsui_3295 at 3537.473 kb on + strand, within Dsui_3295 at 3537.580 kb on + strand at 3537.674 kb on + strand at 3537.725 kb on + strand at 3537.732 kb on + strand at 3537.745 kb on - strand at 3537.928 kb on - strand at 3537.975 kb on - strand at 3538.012 kb on + strand at 3538.056 kb on - strand at 3538.063 kb on - strand at 3538.079 kb on - strand at 3538.086 kb on + strand at 3538.093 kb on + strand at 3538.101 kb on - strand at 3538.110 kb on - strand at 3538.110 kb on - strand at 3538.165 kb on + strand at 3538.202 kb on + strand at 3538.205 kb on - strand at 3538.260 kb on - strand, within Dsui_3296 at 3538.300 kb on + strand, within Dsui_3296 at 3538.308 kb on - strand, within Dsui_3296 at 3538.310 kb on + strand, within Dsui_3296 at 3538.324 kb on + strand, within Dsui_3296 at 3538.344 kb on + strand, within Dsui_3296 at 3538.352 kb on - strand, within Dsui_3296 at 3538.410 kb on + strand, within Dsui_3296 at 3538.418 kb on - strand, within Dsui_3296 at 3538.471 kb on + strand, within Dsui_3296 at 3538.479 kb on - strand, within Dsui_3296 at 3538.499 kb on - strand, within Dsui_3296 at 3538.500 kb on + strand, within Dsui_3296 at 3538.500 kb on + strand, within Dsui_3296 at 3538.508 kb on - strand, within Dsui_3296 at 3538.518 kb on - strand, within Dsui_3296 at 3538.541 kb on + strand, within Dsui_3296 at 3538.575 kb on + strand, within Dsui_3296 at 3538.575 kb on + strand, within Dsui_3296 at 3538.575 kb on + strand, within Dsui_3296 at 3538.575 kb on + strand, within Dsui_3296 at 3538.583 kb on - strand, within Dsui_3296 at 3538.583 kb on - strand, within Dsui_3296 at 3538.587 kb on + strand, within Dsui_3296
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 3,534,476 - Dsui_3294 0.54 -2.4 3,534,499 + Dsui_3294 0.55 +0.7 3,534,525 + Dsui_3294 0.56 +0.7 3,534,543 + Dsui_3294 0.57 -0.8 3,534,565 + -0.8 3,534,567 - Dsui_3294 0.59 -1.6 3,534,636 - Dsui_3294 0.62 +0.7 3,534,641 - Dsui_3294 0.63 -2.4 3,534,800 + Dsui_3294 0.71 -0.3 3,534,800 + Dsui_3294 0.71 -0.8 3,534,800 + +0.7 3,534,803 - Dsui_3294 0.71 -1.8 3,534,808 - Dsui_3294 0.72 +0.7 3,534,808 - Dsui_3294 0.72 -1.3 3,534,813 - Dsui_3294 0.72 -0.7 3,534,848 + -0.3 3,534,856 - Dsui_3294 0.74 +0.7 3,534,900 + +0.7 3,534,908 - Dsui_3294 0.77 +0.7 3,534,922 + Dsui_3294 0.78 +0.7 3,534,941 - Dsui_3294 0.79 +0.7 3,534,945 + Dsui_3294 0.79 +0.7 3,534,976 + +0.7 3,534,984 - Dsui_3294 0.81 -2.3 3,534,994 - Dsui_3294 0.82 -0.8 3,535,014 - +0.7 3,535,017 + Dsui_3294 0.83 -1.8 3,535,019 - Dsui_3294 0.83 -0.3 3,535,058 + Dsui_3294 0.85 +0.7 3,535,066 - Dsui_3294 0.86 -0.8 3,535,104 + +0.7 3,535,107 - Dsui_3294 0.88 -2.1 3,535,107 - Dsui_3294 0.88 +0.7 3,535,109 - Dsui_3294 0.88 -0.8 3,535,155 + +0.7 3,535,171 + -1.3 3,535,324 + -0.3 3,535,324 + +0.7 3,535,326 - +0.7 3,535,328 - +0.7 3,535,332 - -1.3 3,535,336 - +0.7 3,535,453 + -0.8 3,535,462 + -0.6 3,535,462 + +0.4 3,535,462 + -0.3 3,535,509 + -0.2 3,535,751 + Dsui_3295 0.13 -0.7 3,535,784 + Dsui_3295 0.14 +1.2 3,535,784 + Dsui_3295 0.14 -0.2 3,535,847 - -0.8 3,535,860 + Dsui_3295 0.17 +0.3 3,536,003 + Dsui_3295 0.24 -0.7 3,536,285 + Dsui_3295 0.36 -0.0 3,536,561 + Dsui_3295 0.49 -0.3 3,536,884 + Dsui_3295 0.63 +0.2 3,537,137 + Dsui_3295 0.74 +0.5 3,537,316 + Dsui_3295 0.82 -0.4 3,537,473 + Dsui_3295 0.89 -0.1 3,537,580 + -0.1 3,537,674 + -0.2 3,537,725 + +0.5 3,537,732 + +0.0 3,537,745 - +0.7 3,537,928 - -0.3 3,537,975 - +0.7 3,538,012 + -1.3 3,538,056 - +0.7 3,538,063 - -0.3 3,538,079 - -0.3 3,538,086 + -0.1 3,538,093 + -0.7 3,538,101 - -0.3 3,538,110 - +0.7 3,538,110 - -1.6 3,538,165 + -0.2 3,538,202 + +0.0 3,538,205 - +0.7 3,538,260 - Dsui_3296 0.15 -0.3 3,538,300 + Dsui_3296 0.18 -0.1 3,538,308 - Dsui_3296 0.18 -0.3 3,538,310 + Dsui_3296 0.19 -0.6 3,538,324 + Dsui_3296 0.20 -0.9 3,538,344 + Dsui_3296 0.21 -0.8 3,538,352 - Dsui_3296 0.22 -0.3 3,538,410 + Dsui_3296 0.27 -0.8 3,538,418 - Dsui_3296 0.27 -0.3 3,538,471 + Dsui_3296 0.32 +0.4 3,538,479 - Dsui_3296 0.32 +0.7 3,538,499 - Dsui_3296 0.34 +0.7 3,538,500 + Dsui_3296 0.34 -0.8 3,538,500 + Dsui_3296 0.34 +0.2 3,538,508 - Dsui_3296 0.35 +0.7 3,538,518 - Dsui_3296 0.36 -0.3 3,538,541 + Dsui_3296 0.37 -0.3 3,538,575 + Dsui_3296 0.40 -0.6 3,538,575 + Dsui_3296 0.40 -0.3 3,538,575 + Dsui_3296 0.40 -1.4 3,538,575 + Dsui_3296 0.40 -0.0 3,538,583 - Dsui_3296 0.41 -0.8 3,538,583 - Dsui_3296 0.41 -0.8 3,538,587 + Dsui_3296 0.41 +0.7
Or see this region's nucleotide sequence