Strain Fitness in Dechlorosoma suillum PS around Dsui_3229
Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Thallium(I) acetate 0.003 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,466,681 | + | +0.7 | |||
3,466,717 | - | Dsui_3227 | 0.86 | -0.9 | |
3,466,722 | - | Dsui_3227 | 0.87 | -0.7 | |
3,466,837 | - | +0.7 | |||
3,466,871 | - | -0.0 | |||
3,466,886 | - | +0.7 | |||
3,466,941 | - | -1.5 | |||
3,467,154 | - | -1.3 | |||
3,467,287 | + | Dsui_3228 | 0.38 | -0.2 | |
3,467,338 | + | Dsui_3228 | 0.49 | -0.1 | |
3,467,356 | + | Dsui_3228 | 0.53 | -0.2 | |
3,467,420 | - | Dsui_3228 | 0.66 | -0.3 | |
3,467,539 | + | -0.1 | |||
3,467,556 | + | -0.0 | |||
3,467,563 | - | -0.9 | |||
3,467,617 | - | +0.7 | |||
3,467,660 | - | -1.3 | |||
3,467,667 | + | -0.3 | |||
3,467,714 | + | +0.7 | |||
3,467,722 | - | +0.7 | |||
3,467,722 | - | +0.7 | |||
3,467,722 | - | -2.0 | |||
3,467,763 | - | Dsui_3229 | 0.12 | -1.9 | |
3,467,805 | + | +0.7 | |||
3,467,812 | - | Dsui_3229 | 0.17 | -2.1 | |
3,467,820 | + | -1.9 | |||
3,467,828 | - | Dsui_3229 | 0.19 | -1.5 | |
3,467,950 | + | +0.7 | |||
3,468,133 | - | Dsui_3229 | 0.51 | -0.3 | |
3,468,149 | + | -0.3 | |||
3,468,861 | - | Dsui_3230 | 0.10 | -0.0 | |
3,469,179 | + | -0.3 | |||
3,469,206 | - | Dsui_3230 | 0.24 | -1.6 | |
3,469,233 | - | Dsui_3230 | 0.25 | -0.2 | |
3,469,260 | - | Dsui_3230 | 0.26 | -0.9 | |
3,469,337 | + | +0.7 | |||
3,469,414 | - | Dsui_3230 | 0.32 | -0.3 | |
3,469,552 | - | +0.7 | |||
3,469,576 | + | Dsui_3230 | 0.38 | -0.9 |
Or see this region's nucleotide sequence