Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2972 and Dsui_2973 are separated by 5 nucleotides Dsui_2973 and Dsui_2974 are separated by 4 nucleotides Dsui_2974 and Dsui_2975 are separated by 9 nucleotides
Dsui_2972: Dsui_2972 - leucyl/phenylalanyl-tRNA--protein transferase, at 3,177,667 to 3,178,383
_2972
Dsui_2973: Dsui_2973 - putative arginyl-tRNA:protein arginylyltransferase, at 3,178,389 to 3,179,162
_2973
Dsui_2974: Dsui_2974 - putative iron-regulated membrane protein, at 3,179,167 to 3,180,438
_2974
Dsui_2975: Dsui_2975 - TonB-dependent siderophore receptor, at 3,180,448 to 3,182,874
_2975
Position (kb)
3179
3180
3181 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3178.233 kb on + strand, within Dsui_2972 at 3178.241 kb on + strand, within Dsui_2972 at 3178.241 kb on + strand, within Dsui_2972 at 3178.441 kb on - strand at 3178.457 kb on - strand at 3178.486 kb on + strand, within Dsui_2973 at 3178.726 kb on + strand, within Dsui_2973 at 3178.936 kb on + strand, within Dsui_2973 at 3178.969 kb on + strand, within Dsui_2973 at 3179.151 kb on + strand at 3179.182 kb on + strand at 3179.237 kb on - strand at 3179.406 kb on + strand, within Dsui_2974 at 3179.429 kb on - strand, within Dsui_2974 at 3179.509 kb on - strand, within Dsui_2974 at 3179.509 kb on - strand, within Dsui_2974 at 3179.612 kb on - strand, within Dsui_2974 at 3179.625 kb on - strand, within Dsui_2974 at 3179.637 kb on + strand, within Dsui_2974 at 3179.734 kb on + strand at 3179.766 kb on + strand, within Dsui_2974 at 3179.856 kb on - strand, within Dsui_2974 at 3179.941 kb on + strand, within Dsui_2974 at 3179.941 kb on + strand, within Dsui_2974 at 3180.019 kb on - strand at 3180.019 kb on - strand at 3180.057 kb on + strand, within Dsui_2974 at 3180.057 kb on + strand at 3180.071 kb on - strand, within Dsui_2974 at 3180.221 kb on - strand, within Dsui_2974 at 3180.356 kb on + strand at 3180.364 kb on - strand at 3180.472 kb on + strand at 3180.627 kb on - strand at 3180.876 kb on - strand, within Dsui_2975 at 3180.881 kb on - strand at 3180.954 kb on + strand at 3181.058 kb on + strand at 3181.091 kb on + strand, within Dsui_2975 at 3181.249 kb on - strand, within Dsui_2975 at 3181.249 kb on - strand, within Dsui_2975 at 3181.269 kb on - strand, within Dsui_2975 at 3181.336 kb on - strand, within Dsui_2975 at 3181.362 kb on - strand, within Dsui_2975 at 3181.367 kb on - strand, within Dsui_2975 at 3181.428 kb on - strand, within Dsui_2975 at 3181.429 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 3,178,233 + Dsui_2972 0.79 -0.2 3,178,241 + Dsui_2972 0.80 -0.2 3,178,241 + Dsui_2972 0.80 -1.2 3,178,441 - -0.3 3,178,457 - +0.7 3,178,486 + Dsui_2973 0.13 -0.2 3,178,726 + Dsui_2973 0.44 -0.3 3,178,936 + Dsui_2973 0.71 -0.2 3,178,969 + Dsui_2973 0.75 +0.1 3,179,151 + +0.0 3,179,182 + +0.3 3,179,237 - +0.7 3,179,406 + Dsui_2974 0.19 -3.1 3,179,429 - Dsui_2974 0.21 +0.7 3,179,509 - Dsui_2974 0.27 +0.7 3,179,509 - Dsui_2974 0.27 -0.3 3,179,612 - Dsui_2974 0.35 -1.8 3,179,625 - Dsui_2974 0.36 +0.7 3,179,637 + Dsui_2974 0.37 +0.7 3,179,734 + +0.7 3,179,766 + Dsui_2974 0.47 +0.7 3,179,856 - Dsui_2974 0.54 -0.8 3,179,941 + Dsui_2974 0.61 +0.7 3,179,941 + Dsui_2974 0.61 -0.3 3,180,019 - +0.7 3,180,019 - +0.7 3,180,057 + Dsui_2974 0.70 -0.3 3,180,057 + +0.7 3,180,071 - Dsui_2974 0.71 -1.3 3,180,221 - Dsui_2974 0.83 -1.6 3,180,356 + +0.7 3,180,364 - -0.8 3,180,472 + +0.7 3,180,627 - +0.7 3,180,876 - Dsui_2975 0.18 -0.3 3,180,881 - +0.7 3,180,954 + +0.7 3,181,058 + +0.7 3,181,091 + Dsui_2975 0.26 -0.3 3,181,249 - Dsui_2975 0.33 +0.7 3,181,249 - Dsui_2975 0.33 -1.3 3,181,269 - Dsui_2975 0.34 +0.7 3,181,336 - Dsui_2975 0.37 -0.8 3,181,362 - Dsui_2975 0.38 -0.8 3,181,367 - Dsui_2975 0.38 -0.8 3,181,428 - Dsui_2975 0.40 -0.3 3,181,429 - +0.7
Or see this region's nucleotide sequence