Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2968 and Dsui_2969 overlap by 4 nucleotides Dsui_2969 and Dsui_2970 are separated by 13 nucleotides Dsui_2970 and Dsui_2971 overlap by 4 nucleotides Dsui_2971 and Dsui_2972 are separated by 106 nucleotides
Dsui_2968: Dsui_2968 - ferredoxin, at 3,175,264 to 3,175,602
_2968
Dsui_2969: Dsui_2969 - uroporphyrin-III C-methyltransferase, at 3,175,599 to 3,176,366
_2969
Dsui_2970: Dsui_2970 - putative Fe-S oxidoreductase, at 3,176,380 to 3,176,670
_2970
Dsui_2971: Dsui_2971 - putative esterase of the alpha-beta hydrolase superfamily, at 3,176,667 to 3,177,560
_2971
Dsui_2972: Dsui_2972 - leucyl/phenylalanyl-tRNA--protein transferase, at 3,177,667 to 3,178,383
_2972
Position (kb)
3176
3177 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3175.383 kb on + strand, within Dsui_2968 at 3175.391 kb on - strand, within Dsui_2968 at 3175.427 kb on - strand, within Dsui_2968 at 3175.520 kb on + strand, within Dsui_2968 at 3175.522 kb on - strand, within Dsui_2968 at 3175.597 kb on - strand at 3175.690 kb on + strand at 3175.713 kb on + strand, within Dsui_2969 at 3175.828 kb on + strand, within Dsui_2969 at 3175.975 kb on + strand, within Dsui_2969 at 3176.067 kb on + strand, within Dsui_2969 at 3176.102 kb on - strand, within Dsui_2969 at 3176.173 kb on + strand, within Dsui_2969 at 3176.253 kb on - strand, within Dsui_2969 at 3176.269 kb on + strand, within Dsui_2969 at 3176.406 kb on + strand at 3176.414 kb on - strand, within Dsui_2970 at 3176.436 kb on + strand, within Dsui_2970 at 3176.479 kb on - strand, within Dsui_2970 at 3176.526 kb on + strand, within Dsui_2970 at 3176.850 kb on + strand, within Dsui_2971 at 3176.858 kb on - strand, within Dsui_2971 at 3176.863 kb on + strand, within Dsui_2971 at 3176.935 kb on + strand at 3176.943 kb on - strand, within Dsui_2971 at 3177.060 kb on - strand, within Dsui_2971 at 3177.128 kb on + strand at 3177.198 kb on - strand, within Dsui_2971 at 3177.245 kb on + strand at 3177.245 kb on + strand, within Dsui_2971 at 3177.289 kb on + strand at 3177.403 kb on - strand, within Dsui_2971 at 3177.432 kb on - strand, within Dsui_2971 at 3177.632 kb on - strand at 3177.637 kb on - strand at 3177.643 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 3,175,383 + Dsui_2968 0.35 -0.8 3,175,391 - Dsui_2968 0.37 -0.3 3,175,427 - Dsui_2968 0.48 +0.7 3,175,520 + Dsui_2968 0.76 -0.8 3,175,522 - Dsui_2968 0.76 -0.3 3,175,597 - +0.7 3,175,690 + +0.7 3,175,713 + Dsui_2969 0.15 -0.8 3,175,828 + Dsui_2969 0.30 -1.8 3,175,975 + Dsui_2969 0.49 -0.3 3,176,067 + Dsui_2969 0.61 -1.6 3,176,102 - Dsui_2969 0.65 -3.0 3,176,173 + Dsui_2969 0.75 +0.7 3,176,253 - Dsui_2969 0.85 -0.3 3,176,269 + Dsui_2969 0.87 -1.8 3,176,406 + +0.7 3,176,414 - Dsui_2970 0.12 -0.3 3,176,436 + Dsui_2970 0.19 -1.8 3,176,479 - Dsui_2970 0.34 -1.1 3,176,526 + Dsui_2970 0.50 -1.3 3,176,850 + Dsui_2971 0.20 +0.7 3,176,858 - Dsui_2971 0.21 -0.7 3,176,863 + Dsui_2971 0.22 +0.7 3,176,935 + -0.3 3,176,943 - Dsui_2971 0.31 -0.1 3,177,060 - Dsui_2971 0.44 -1.3 3,177,128 + -0.3 3,177,198 - Dsui_2971 0.59 +0.4 3,177,245 + +0.7 3,177,245 + Dsui_2971 0.65 -1.8 3,177,289 + +0.7 3,177,403 - Dsui_2971 0.82 -1.8 3,177,432 - Dsui_2971 0.86 -0.5 3,177,632 - +0.7 3,177,637 - +0.7 3,177,643 - +0.7
Or see this region's nucleotide sequence