Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2949 and Dsui_2950 are separated by 132 nucleotides Dsui_2950 and Dsui_2951 are separated by 2 nucleotides
Dsui_2949: Dsui_2949 - Fe2+-dicitrate sensor, membrane component, at 3,155,147 to 3,156,166
_2949
Dsui_2950: Dsui_2950 - TonB-dependent siderophore receptor, at 3,156,299 to 3,158,701
_2950
Dsui_2951: Dsui_2951 - putative iron-regulated membrane protein, at 3,158,704 to 3,159,981
_2951
Position (kb)
3156
3157
3158
3159 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3155.499 kb on + strand, within Dsui_2949 at 3155.616 kb on - strand, within Dsui_2949 at 3155.852 kb on - strand at 3155.910 kb on + strand, within Dsui_2949 at 3156.078 kb on - strand at 3156.111 kb on + strand at 3156.116 kb on + strand at 3156.160 kb on + strand at 3156.160 kb on + strand at 3156.168 kb on - strand at 3156.181 kb on - strand at 3156.251 kb on + strand at 3156.499 kb on - strand at 3156.539 kb on - strand at 3156.601 kb on - strand, within Dsui_2950 at 3156.607 kb on - strand at 3156.626 kb on + strand, within Dsui_2950 at 3156.627 kb on + strand, within Dsui_2950 at 3156.770 kb on + strand, within Dsui_2950 at 3156.801 kb on - strand at 3156.882 kb on - strand at 3156.945 kb on + strand at 3156.945 kb on + strand, within Dsui_2950 at 3156.953 kb on - strand, within Dsui_2950 at 3156.991 kb on + strand, within Dsui_2950 at 3156.991 kb on + strand at 3157.021 kb on + strand, within Dsui_2950 at 3157.028 kb on + strand, within Dsui_2950 at 3157.076 kb on - strand at 3157.182 kb on + strand, within Dsui_2950 at 3157.279 kb on + strand, within Dsui_2950 at 3157.448 kb on - strand, within Dsui_2950 at 3157.515 kb on + strand, within Dsui_2950 at 3157.636 kb on + strand, within Dsui_2950 at 3157.644 kb on + strand, within Dsui_2950 at 3157.893 kb on + strand, within Dsui_2950 at 3157.901 kb on - strand, within Dsui_2950 at 3157.905 kb on + strand at 3158.028 kb on + strand, within Dsui_2950 at 3158.084 kb on - strand, within Dsui_2950 at 3158.089 kb on - strand at 3158.152 kb on + strand, within Dsui_2950 at 3158.240 kb on + strand at 3158.276 kb on - strand at 3158.284 kb on - strand at 3158.314 kb on + strand at 3158.326 kb on + strand at 3158.532 kb on + strand at 3158.754 kb on + strand at 3158.837 kb on - strand, within Dsui_2951 at 3158.971 kb on - strand, within Dsui_2951 at 3158.977 kb on + strand, within Dsui_2951 at 3159.002 kb on + strand, within Dsui_2951 at 3159.020 kb on - strand, within Dsui_2951 at 3159.023 kb on + strand, within Dsui_2951 at 3159.138 kb on + strand, within Dsui_2951 at 3159.153 kb on + strand at 3159.210 kb on + strand at 3159.210 kb on + strand at 3159.218 kb on - strand, within Dsui_2951 at 3159.402 kb on + strand at 3159.428 kb on + strand, within Dsui_2951 at 3159.442 kb on + strand, within Dsui_2951 at 3159.471 kb on + strand, within Dsui_2951 at 3159.484 kb on + strand, within Dsui_2951
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 3,155,499 + Dsui_2949 0.35 +0.4 3,155,616 - Dsui_2949 0.46 -1.6 3,155,852 - +0.7 3,155,910 + Dsui_2949 0.75 -1.3 3,156,078 - -0.8 3,156,111 + -1.3 3,156,116 + +0.2 3,156,160 + +1.7 3,156,160 + -0.6 3,156,168 - +0.7 3,156,181 - +0.7 3,156,251 + -1.3 3,156,499 - -0.8 3,156,539 - -0.3 3,156,601 - Dsui_2950 0.13 -1.8 3,156,607 - +0.7 3,156,626 + Dsui_2950 0.14 -1.3 3,156,627 + Dsui_2950 0.14 -0.8 3,156,770 + Dsui_2950 0.20 -0.3 3,156,801 - -1.8 3,156,882 - -0.3 3,156,945 + +0.7 3,156,945 + Dsui_2950 0.27 -0.3 3,156,953 - Dsui_2950 0.27 -0.8 3,156,991 + Dsui_2950 0.29 +0.7 3,156,991 + +0.7 3,157,021 + Dsui_2950 0.30 +0.7 3,157,028 + Dsui_2950 0.30 +0.7 3,157,076 - -0.3 3,157,182 + Dsui_2950 0.37 -0.3 3,157,279 + Dsui_2950 0.41 -0.3 3,157,448 - Dsui_2950 0.48 -1.6 3,157,515 + Dsui_2950 0.51 -0.8 3,157,636 + Dsui_2950 0.56 -0.3 3,157,644 + Dsui_2950 0.56 +0.7 3,157,893 + Dsui_2950 0.66 -0.8 3,157,901 - Dsui_2950 0.67 -0.3 3,157,905 + +0.7 3,158,028 + Dsui_2950 0.72 -0.3 3,158,084 - Dsui_2950 0.74 -0.3 3,158,089 - -0.3 3,158,152 + Dsui_2950 0.77 -0.8 3,158,240 + +0.7 3,158,276 - -0.3 3,158,284 - -0.8 3,158,314 + +0.7 3,158,326 + +0.7 3,158,532 + +0.7 3,158,754 + -1.3 3,158,837 - Dsui_2951 0.10 +0.7 3,158,971 - Dsui_2951 0.21 +0.7 3,158,977 + Dsui_2951 0.21 -0.3 3,159,002 + Dsui_2951 0.23 -0.8 3,159,020 - Dsui_2951 0.25 -0.3 3,159,023 + Dsui_2951 0.25 -0.3 3,159,138 + Dsui_2951 0.34 +0.7 3,159,153 + +0.7 3,159,210 + +0.7 3,159,210 + +0.7 3,159,218 - Dsui_2951 0.40 -0.3 3,159,402 + +0.7 3,159,428 + Dsui_2951 0.57 -0.3 3,159,442 + Dsui_2951 0.58 -3.3 3,159,471 + Dsui_2951 0.60 -1.6 3,159,484 + Dsui_2951 0.61 +0.7
Or see this region's nucleotide sequence