Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2706 and Dsui_2707 are separated by 21 nucleotides Dsui_2707 and Dsui_2708 are separated by 56 nucleotides Dsui_2708 and Dsui_2709 are separated by 22 nucleotides Dsui_2709 and Dsui_2710 are separated by 59 nucleotides
Dsui_2706: Dsui_2706 - adenine phosphoribosyltransferase, at 2,863,016 to 2,863,543
_2706
Dsui_2707: Dsui_2707 - putative permease, at 2,863,565 to 2,864,470
_2707
Dsui_2708: Dsui_2708 - succinyldiaminopimelate transaminase, at 2,864,527 to 2,865,732
_2708
Dsui_2709: Dsui_2709 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 2,865,755 to 2,866,573
_2709
Dsui_2710: Dsui_2710 - pilus retraction protein PilT, at 2,866,633 to 2,867,814
_2710
Position (kb)
2864
2865
2866 Strain fitness (log2 ratio)
-2
-1
0
1 at 2863.529 kb on - strand at 2863.631 kb on - strand at 2863.740 kb on + strand at 2863.759 kb on + strand, within Dsui_2707 at 2863.772 kb on - strand, within Dsui_2707 at 2863.844 kb on + strand, within Dsui_2707 at 2863.926 kb on + strand, within Dsui_2707 at 2863.934 kb on - strand at 2863.948 kb on + strand at 2863.971 kb on - strand, within Dsui_2707 at 2864.099 kb on + strand at 2864.130 kb on + strand, within Dsui_2707 at 2864.138 kb on - strand, within Dsui_2707 at 2864.153 kb on - strand, within Dsui_2707 at 2864.310 kb on + strand, within Dsui_2707 at 2864.345 kb on + strand, within Dsui_2707 at 2864.383 kb on - strand at 2864.383 kb on - strand at 2864.393 kb on - strand at 2864.393 kb on - strand at 2864.393 kb on - strand at 2864.505 kb on + strand at 2864.505 kb on + strand at 2864.513 kb on - strand at 2864.548 kb on + strand at 2864.561 kb on - strand at 2864.583 kb on + strand at 2864.583 kb on + strand at 2864.583 kb on + strand at 2864.591 kb on - strand at 2864.593 kb on + strand at 2864.628 kb on + strand at 2864.636 kb on - strand at 2864.664 kb on + strand, within Dsui_2708 at 2864.726 kb on + strand, within Dsui_2708 at 2864.726 kb on + strand, within Dsui_2708 at 2864.734 kb on - strand, within Dsui_2708 at 2864.913 kb on + strand, within Dsui_2708 at 2864.937 kb on + strand, within Dsui_2708 at 2864.963 kb on + strand, within Dsui_2708 at 2865.006 kb on + strand, within Dsui_2708 at 2865.014 kb on - strand, within Dsui_2708 at 2865.081 kb on - strand at 2865.081 kb on - strand at 2865.081 kb on - strand at 2865.321 kb on - strand at 2865.503 kb on + strand, within Dsui_2708 at 2865.503 kb on + strand, within Dsui_2708 at 2865.534 kb on - strand, within Dsui_2708 at 2865.588 kb on + strand, within Dsui_2708 at 2865.709 kb on - strand at 2865.726 kb on + strand at 2865.727 kb on + strand at 2866.577 kb on + strand at 2866.582 kb on + strand at 2866.650 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 2,863,529 - -2.0 2,863,631 - -0.2 2,863,740 + +0.8 2,863,759 + Dsui_2707 0.21 -1.2 2,863,772 - Dsui_2707 0.23 -0.2 2,863,844 + Dsui_2707 0.31 -0.2 2,863,926 + Dsui_2707 0.40 -2.2 2,863,934 - +0.8 2,863,948 + +0.8 2,863,971 - Dsui_2707 0.45 +0.8 2,864,099 + -0.2 2,864,130 + Dsui_2707 0.62 -0.8 2,864,138 - Dsui_2707 0.63 +0.8 2,864,153 - Dsui_2707 0.65 +0.8 2,864,310 + Dsui_2707 0.82 -0.8 2,864,345 + Dsui_2707 0.86 +0.8 2,864,383 - +0.8 2,864,383 - +0.8 2,864,393 - +0.8 2,864,393 - +0.8 2,864,393 - -2.2 2,864,505 + -0.6 2,864,505 + +0.0 2,864,513 - +0.8 2,864,548 + -0.1 2,864,561 - -0.2 2,864,583 + -0.5 2,864,583 + +0.1 2,864,583 + +0.4 2,864,591 - +0.8 2,864,593 + -0.3 2,864,628 + +0.1 2,864,636 - -0.8 2,864,664 + Dsui_2708 0.11 -0.4 2,864,726 + Dsui_2708 0.17 -0.0 2,864,726 + Dsui_2708 0.17 -0.0 2,864,734 - Dsui_2708 0.17 -1.2 2,864,913 + Dsui_2708 0.32 +0.1 2,864,937 + Dsui_2708 0.34 -0.0 2,864,963 + Dsui_2708 0.36 -0.0 2,865,006 + Dsui_2708 0.40 +0.1 2,865,014 - Dsui_2708 0.40 -0.2 2,865,081 - +0.8 2,865,081 - +0.8 2,865,081 - -0.2 2,865,321 - +0.8 2,865,503 + Dsui_2708 0.81 -0.0 2,865,503 + Dsui_2708 0.81 +0.2 2,865,534 - Dsui_2708 0.83 +0.8 2,865,588 + Dsui_2708 0.88 +0.2 2,865,709 - +0.8 2,865,726 + +0.0 2,865,727 + +0.1 2,866,577 + -0.2 2,866,582 + -0.2 2,866,650 + +0.1
Or see this region's nucleotide sequence