Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2487 and Dsui_2488 are separated by 7 nucleotides Dsui_2488 and Dsui_2489 are separated by 6 nucleotides Dsui_2489 and Dsui_2490 are separated by 168 nucleotides Dsui_2490 and Dsui_2491 are separated by 22 nucleotides
Dsui_2487: Dsui_2487 - hypothetical protein, at 2,636,061 to 2,637,569
_2487
Dsui_2488: Dsui_2488 - Protein of unknown function (DUF3293), at 2,637,577 to 2,638,059
_2488
Dsui_2489: Dsui_2489 - polyhydroxyalkanoate depolymerase, intracellular, at 2,638,066 to 2,639,286
_2489
Dsui_2490: Dsui_2490 - protein kinase family protein, at 2,639,455 to 2,639,880
_2490
Dsui_2491: Dsui_2491 - transposase, TnpA family, at 2,639,903 to 2,642,932
_2491
Position (kb)
2638
2639
2640 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2637.069 kb on - strand at 2637.069 kb on - strand at 2637.071 kb on - strand at 2637.115 kb on - strand, within Dsui_2487 at 2637.148 kb on - strand at 2637.148 kb on - strand at 2637.162 kb on + strand, within Dsui_2487 at 2637.193 kb on - strand at 2637.348 kb on + strand, within Dsui_2487 at 2637.348 kb on + strand, within Dsui_2487 at 2637.450 kb on + strand at 2637.505 kb on - strand at 2637.538 kb on + strand at 2637.538 kb on + strand at 2637.559 kb on + strand at 2637.698 kb on + strand, within Dsui_2488 at 2637.756 kb on + strand, within Dsui_2488 at 2637.821 kb on + strand, within Dsui_2488 at 2637.821 kb on + strand, within Dsui_2488 at 2637.915 kb on - strand, within Dsui_2488 at 2637.924 kb on + strand, within Dsui_2488 at 2638.007 kb on + strand, within Dsui_2488 at 2638.023 kb on - strand at 2638.064 kb on + strand at 2638.098 kb on + strand at 2638.098 kb on + strand at 2638.098 kb on + strand at 2638.106 kb on - strand at 2638.106 kb on - strand at 2638.106 kb on - strand at 2638.176 kb on - strand at 2638.195 kb on - strand at 2638.214 kb on - strand, within Dsui_2489 at 2638.280 kb on - strand at 2638.393 kb on + strand at 2638.462 kb on - strand, within Dsui_2489 at 2638.462 kb on - strand, within Dsui_2489 at 2638.595 kb on + strand, within Dsui_2489 at 2638.636 kb on + strand, within Dsui_2489 at 2638.639 kb on + strand at 2638.689 kb on - strand, within Dsui_2489 at 2638.696 kb on - strand, within Dsui_2489 at 2638.840 kb on + strand, within Dsui_2489 at 2638.849 kb on + strand at 2638.972 kb on + strand, within Dsui_2489 at 2639.032 kb on - strand, within Dsui_2489 at 2639.033 kb on + strand, within Dsui_2489 at 2639.150 kb on - strand, within Dsui_2489 at 2639.192 kb on + strand at 2639.447 kb on - strand at 2639.461 kb on + strand at 2639.499 kb on + strand, within Dsui_2490 at 2639.499 kb on + strand, within Dsui_2490 at 2639.499 kb on + strand, within Dsui_2490 at 2639.499 kb on + strand, within Dsui_2490 at 2639.507 kb on - strand at 2639.507 kb on - strand, within Dsui_2490 at 2639.507 kb on - strand, within Dsui_2490 at 2639.507 kb on - strand at 2639.509 kb on + strand, within Dsui_2490 at 2639.742 kb on + strand, within Dsui_2490 at 2639.748 kb on - strand, within Dsui_2490 at 2639.782 kb on + strand, within Dsui_2490 at 2639.953 kb on - strand at 2639.958 kb on - strand at 2639.975 kb on - strand at 2639.975 kb on - strand at 2639.975 kb on - strand at 2639.978 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.025 kb on + strand at 2640.026 kb on + strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.033 kb on - strand at 2640.057 kb on + strand at 2640.059 kb on - strand at 2640.089 kb on + strand at 2640.092 kb on + strand at 2640.126 kb on - strand at 2640.126 kb on - strand at 2640.163 kb on - strand at 2640.188 kb on - strand at 2640.267 kb on - strand, within Dsui_2491
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 2,637,069 - +0.7 2,637,069 - -0.3 2,637,071 - +0.7 2,637,115 - Dsui_2487 0.70 -1.3 2,637,148 - -0.8 2,637,148 - -0.8 2,637,162 + Dsui_2487 0.73 -3.3 2,637,193 - +0.7 2,637,348 + Dsui_2487 0.85 -0.8 2,637,348 + Dsui_2487 0.85 +1.3 2,637,450 + -1.3 2,637,505 - -0.8 2,637,538 + -1.7 2,637,538 + -0.3 2,637,559 + -0.5 2,637,698 + Dsui_2488 0.25 -0.8 2,637,756 + Dsui_2488 0.37 +0.4 2,637,821 + Dsui_2488 0.51 +0.7 2,637,821 + Dsui_2488 0.51 -0.3 2,637,915 - Dsui_2488 0.70 -0.8 2,637,924 + Dsui_2488 0.72 -0.6 2,638,007 + Dsui_2488 0.89 -0.0 2,638,023 - -0.8 2,638,064 + -1.3 2,638,098 + +0.7 2,638,098 + +0.7 2,638,098 + -1.6 2,638,106 - -1.3 2,638,106 - +0.7 2,638,106 - -0.3 2,638,176 - -0.3 2,638,195 - +0.7 2,638,214 - Dsui_2489 0.12 -1.6 2,638,280 - -0.3 2,638,393 + +0.7 2,638,462 - Dsui_2489 0.32 -1.3 2,638,462 - Dsui_2489 0.32 -1.3 2,638,595 + Dsui_2489 0.43 -0.3 2,638,636 + Dsui_2489 0.47 -0.3 2,638,639 + +0.7 2,638,689 - Dsui_2489 0.51 -1.3 2,638,696 - Dsui_2489 0.52 -1.3 2,638,840 + Dsui_2489 0.63 -0.3 2,638,849 + +0.7 2,638,972 + Dsui_2489 0.74 +0.7 2,639,032 - Dsui_2489 0.79 +0.7 2,639,033 + Dsui_2489 0.79 +0.7 2,639,150 - Dsui_2489 0.89 -1.3 2,639,192 + -0.3 2,639,447 - +0.7 2,639,461 + -0.8 2,639,499 + Dsui_2490 0.10 +0.3 2,639,499 + Dsui_2490 0.10 +0.7 2,639,499 + Dsui_2490 0.10 -2.6 2,639,499 + Dsui_2490 0.10 -0.3 2,639,507 - +0.7 2,639,507 - Dsui_2490 0.12 +0.7 2,639,507 - Dsui_2490 0.12 +1.7 2,639,507 - +0.7 2,639,509 + Dsui_2490 0.13 -1.1 2,639,742 + Dsui_2490 0.67 -1.1 2,639,748 - Dsui_2490 0.69 -0.8 2,639,782 + Dsui_2490 0.77 -2.4 2,639,953 - -1.8 2,639,958 - +0.7 2,639,975 - -1.8 2,639,975 - +0.7 2,639,975 - -1.6 2,639,978 + +0.7 2,640,025 + -2.1 2,640,025 + -0.3 2,640,025 + -0.8 2,640,025 + -2.3 2,640,025 + +0.7 2,640,025 + -0.3 2,640,025 + +0.7 2,640,025 + -2.4 2,640,025 + -1.3 2,640,026 + +0.7 2,640,033 - -1.3 2,640,033 - -3.1 2,640,033 - -0.3 2,640,033 - +0.7 2,640,033 - -1.8 2,640,033 - -1.3 2,640,033 - +0.7 2,640,033 - +0.7 2,640,057 + +0.7 2,640,059 - +0.7 2,640,089 + -0.3 2,640,092 + +0.7 2,640,126 - -1.6 2,640,126 - +0.7 2,640,163 - +0.7 2,640,188 - -0.3 2,640,267 - Dsui_2491 0.12 -1.6
Or see this region's nucleotide sequence