Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2429 and Dsui_2430 are separated by 127 nucleotides Dsui_2430 and Dsui_2431 are separated by 54 nucleotides Dsui_2431 and Dsui_2432 are separated by 62 nucleotides Dsui_2432 and Dsui_2433 are separated by 76 nucleotides
Dsui_2429: Dsui_2429 - putative permease, at 2,588,580 to 2,589,719
_2429
Dsui_2430: Dsui_2430 - tRNA-Asn, at 2,589,847 to 2,589,922
_2430
Dsui_2431: Dsui_2431 - tRNA-Asn, at 2,589,977 to 2,590,052
_2431
Dsui_2432: Dsui_2432 - hypothetical protein, at 2,590,115 to 2,591,863
_2432
Dsui_2433: Dsui_2433 - aspartate/tyrosine/aromatic aminotransferase, at 2,591,940 to 2,593,148
_2433
Position (kb)
2590
2591
2592 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2589.184 kb on + strand, within Dsui_2429 at 2589.184 kb on + strand, within Dsui_2429 at 2589.184 kb on + strand, within Dsui_2429 at 2589.192 kb on - strand at 2589.192 kb on - strand at 2589.244 kb on + strand at 2589.248 kb on + strand, within Dsui_2429 at 2589.252 kb on - strand at 2589.262 kb on + strand, within Dsui_2429 at 2589.270 kb on - strand, within Dsui_2429 at 2589.272 kb on + strand, within Dsui_2429 at 2589.290 kb on + strand, within Dsui_2429 at 2589.348 kb on + strand, within Dsui_2429 at 2589.371 kb on - strand, within Dsui_2429 at 2589.433 kb on - strand at 2589.513 kb on - strand at 2589.625 kb on + strand at 2589.664 kb on + strand at 2589.891 kb on - strand, within Dsui_2430 at 2589.938 kb on - strand at 2590.205 kb on + strand at 2590.205 kb on + strand at 2590.205 kb on + strand at 2590.440 kb on - strand at 2590.672 kb on - strand at 2590.706 kb on + strand, within Dsui_2432 at 2590.706 kb on + strand, within Dsui_2432 at 2590.712 kb on + strand, within Dsui_2432 at 2590.717 kb on + strand, within Dsui_2432 at 2590.735 kb on + strand, within Dsui_2432 at 2590.871 kb on + strand, within Dsui_2432 at 2590.879 kb on - strand at 2591.002 kb on + strand, within Dsui_2432 at 2591.002 kb on + strand, within Dsui_2432 at 2591.129 kb on + strand, within Dsui_2432 at 2591.169 kb on + strand, within Dsui_2432 at 2591.212 kb on + strand at 2591.233 kb on + strand, within Dsui_2432 at 2591.349 kb on + strand, within Dsui_2432 at 2591.421 kb on + strand, within Dsui_2432 at 2591.475 kb on + strand, within Dsui_2432 at 2591.514 kb on + strand, within Dsui_2432 at 2591.514 kb on + strand, within Dsui_2432 at 2591.522 kb on - strand, within Dsui_2432 at 2591.534 kb on - strand at 2591.582 kb on - strand at 2591.621 kb on + strand, within Dsui_2432 at 2591.688 kb on + strand, within Dsui_2432 at 2591.737 kb on - strand at 2591.751 kb on + strand at 2591.788 kb on + strand at 2591.803 kb on - strand at 2591.815 kb on - strand at 2591.835 kb on - strand at 2591.843 kb on - strand at 2591.893 kb on + strand at 2591.893 kb on + strand at 2591.893 kb on + strand at 2592.083 kb on - strand, within Dsui_2433 at 2592.153 kb on - strand, within Dsui_2433 at 2592.153 kb on - strand, within Dsui_2433 at 2592.230 kb on + strand at 2592.230 kb on + strand, within Dsui_2433 at 2592.238 kb on - strand, within Dsui_2433 at 2592.253 kb on - strand, within Dsui_2433 at 2592.289 kb on - strand, within Dsui_2433 at 2592.289 kb on - strand, within Dsui_2433 at 2592.307 kb on + strand, within Dsui_2433 at 2592.321 kb on - strand, within Dsui_2433 at 2592.375 kb on - strand, within Dsui_2433 at 2592.434 kb on - strand, within Dsui_2433 at 2592.442 kb on + strand, within Dsui_2433 at 2592.478 kb on - strand, within Dsui_2433 at 2592.548 kb on - strand, within Dsui_2433 at 2592.762 kb on + strand, within Dsui_2433 at 2592.781 kb on + strand, within Dsui_2433 at 2592.834 kb on - strand, within Dsui_2433
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 2,589,184 + Dsui_2429 0.53 -0.8 2,589,184 + Dsui_2429 0.53 -0.2 2,589,184 + Dsui_2429 0.53 +0.8 2,589,192 - +0.8 2,589,192 - +0.8 2,589,244 + -0.8 2,589,248 + Dsui_2429 0.59 -0.8 2,589,252 - -0.2 2,589,262 + Dsui_2429 0.60 -0.2 2,589,270 - Dsui_2429 0.61 -0.2 2,589,272 + Dsui_2429 0.61 -0.8 2,589,290 + Dsui_2429 0.62 -1.2 2,589,348 + Dsui_2429 0.67 -0.2 2,589,371 - Dsui_2429 0.69 -0.2 2,589,433 - -0.2 2,589,513 - +0.8 2,589,625 + -0.8 2,589,664 + +0.8 2,589,891 - Dsui_2430 0.58 +0.1 2,589,938 - -0.1 2,590,205 + -0.2 2,590,205 + +0.8 2,590,205 + -0.2 2,590,440 - -0.8 2,590,672 - +0.8 2,590,706 + Dsui_2432 0.34 -0.8 2,590,706 + Dsui_2432 0.34 +0.8 2,590,712 + Dsui_2432 0.34 -0.8 2,590,717 + Dsui_2432 0.34 -0.8 2,590,735 + Dsui_2432 0.35 -0.2 2,590,871 + Dsui_2432 0.43 -0.8 2,590,879 - +0.8 2,591,002 + Dsui_2432 0.51 -1.8 2,591,002 + Dsui_2432 0.51 +0.8 2,591,129 + Dsui_2432 0.58 -0.8 2,591,169 + Dsui_2432 0.60 +0.8 2,591,212 + +0.8 2,591,233 + Dsui_2432 0.64 -0.8 2,591,349 + Dsui_2432 0.71 -2.0 2,591,421 + Dsui_2432 0.75 +0.8 2,591,475 + Dsui_2432 0.78 -1.6 2,591,514 + Dsui_2432 0.80 -0.2 2,591,514 + Dsui_2432 0.80 +0.8 2,591,522 - Dsui_2432 0.80 -0.2 2,591,534 - +0.8 2,591,582 - -0.2 2,591,621 + Dsui_2432 0.86 +0.8 2,591,688 + Dsui_2432 0.90 +0.8 2,591,737 - -0.4 2,591,751 + +0.8 2,591,788 + -0.2 2,591,803 - -0.2 2,591,815 - -0.2 2,591,835 - -0.8 2,591,843 - +0.8 2,591,893 + -0.8 2,591,893 + -0.2 2,591,893 + -0.2 2,592,083 - Dsui_2433 0.12 -1.8 2,592,153 - Dsui_2433 0.18 -2.4 2,592,153 - Dsui_2433 0.18 -1.6 2,592,230 + +0.8 2,592,230 + Dsui_2433 0.24 +0.8 2,592,238 - Dsui_2433 0.25 -1.3 2,592,253 - Dsui_2433 0.26 -0.9 2,592,289 - Dsui_2433 0.29 -1.8 2,592,289 - Dsui_2433 0.29 -3.9 2,592,307 + Dsui_2433 0.30 -0.8 2,592,321 - Dsui_2433 0.32 -1.5 2,592,375 - Dsui_2433 0.36 -0.8 2,592,434 - Dsui_2433 0.41 -2.3 2,592,442 + Dsui_2433 0.42 +0.8 2,592,478 - Dsui_2433 0.44 -1.0 2,592,548 - Dsui_2433 0.50 -2.1 2,592,762 + Dsui_2433 0.68 +0.8 2,592,781 + Dsui_2433 0.70 -0.8 2,592,834 - Dsui_2433 0.74 -2.1
Or see this region's nucleotide sequence