Strain Fitness in Dechlorosoma suillum PS around Dsui_2270

Experiment: ALP with Thallium(I) acetate 0.003 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2268 and Dsui_2269 are separated by 45 nucleotidesDsui_2269 and Dsui_2270 are separated by 280 nucleotidesDsui_2270 and Dsui_2271 are separated by 54 nucleotides Dsui_2268: Dsui_2268 - putative lactoylglutathione lyase, at 2,420,115 to 2,420,552 _2268 Dsui_2269: Dsui_2269 - SOS regulatory protein LexA, at 2,420,598 to 2,421,209 _2269 Dsui_2270: Dsui_2270 - hypothetical protein, at 2,421,490 to 2,421,693 _2270 Dsui_2271: Dsui_2271 - hypothetical protein, at 2,421,748 to 2,422,731 _2271 Position (kb) 2421 2422Strain fitness (log2 ratio) -1 0 1at 2420.530 kb on - strandat 2420.959 kb on - strand, within Dsui_2269at 2421.207 kb on - strandat 2421.440 kb on + strandat 2421.487 kb on + strandat 2421.605 kb on - strand, within Dsui_2270at 2421.618 kb on - strandat 2421.902 kb on - strand, within Dsui_2271at 2422.011 kb on + strandat 2422.050 kb on + strand, within Dsui_2271at 2422.066 kb on - strand, within Dsui_2271at 2422.133 kb on - strand, within Dsui_2271at 2422.287 kb on + strand, within Dsui_2271at 2422.302 kb on + strand, within Dsui_2271at 2422.310 kb on - strand, within Dsui_2271at 2422.339 kb on + strandat 2422.417 kb on + strandat 2422.453 kb on - strand, within Dsui_2271at 2422.559 kb on - strand, within Dsui_2271at 2422.574 kb on + strandat 2422.611 kb on + strandat 2422.637 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml
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2,420,530 - -1.1
2,420,959 - Dsui_2269 0.59 -1.7
2,421,207 - -0.5
2,421,440 + +0.9
2,421,487 + +0.9
2,421,605 - Dsui_2270 0.56 -0.7
2,421,618 - -0.1
2,421,902 - Dsui_2271 0.16 -0.9
2,422,011 + +0.9
2,422,050 + Dsui_2271 0.31 -1.4
2,422,066 - Dsui_2271 0.32 -1.2
2,422,133 - Dsui_2271 0.39 +0.2
2,422,287 + Dsui_2271 0.55 +0.9
2,422,302 + Dsui_2271 0.56 -1.1
2,422,310 - Dsui_2271 0.57 -0.5
2,422,339 + +0.9
2,422,417 + -1.4
2,422,453 - Dsui_2271 0.72 -0.8
2,422,559 - Dsui_2271 0.82 -0.8
2,422,574 + +0.9
2,422,611 + +0.9
2,422,637 + -1.4

Or see this region's nucleotide sequence