Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2064 and Dsui_2065 are separated by 46 nucleotides Dsui_2065 and Dsui_2066 are separated by 256 nucleotides Dsui_2066 and Dsui_2067 are separated by 250 nucleotides Dsui_2067 and Dsui_2068 overlap by 8 nucleotides
Dsui_2064: Dsui_2064 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,182,657 to 2,183,466
_2064
Dsui_2065: Dsui_2065 - hypothetical protein, contains double-stranded beta-helix domain, at 2,183,513 to 2,184,088
_2065
Dsui_2066: Dsui_2066 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,184,345 to 2,185,148
_2066
Dsui_2067: Dsui_2067 - ABC-type metal ion transport system, permease component, at 2,185,399 to 2,186,097
_2067
Dsui_2068: Dsui_2068 - ABC-type metal ion transport system, ATPase component, at 2,186,090 to 2,186,926
_2068
Position (kb)
2184
2185
2186 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2183.411 kb on + strand at 2183.421 kb on + strand at 2183.488 kb on + strand at 2183.506 kb on - strand at 2183.559 kb on - strand at 2183.619 kb on + strand, within Dsui_2065 at 2183.640 kb on - strand at 2183.640 kb on - strand, within Dsui_2065 at 2183.657 kb on - strand, within Dsui_2065 at 2183.779 kb on - strand, within Dsui_2065 at 2183.794 kb on - strand, within Dsui_2065 at 2183.795 kb on - strand, within Dsui_2065 at 2183.863 kb on - strand, within Dsui_2065 at 2183.890 kb on + strand, within Dsui_2065 at 2183.952 kb on - strand, within Dsui_2065 at 2184.012 kb on - strand, within Dsui_2065 at 2184.068 kb on + strand at 2184.095 kb on + strand at 2184.101 kb on - strand at 2184.244 kb on + strand at 2184.254 kb on - strand at 2184.288 kb on - strand at 2184.445 kb on + strand, within Dsui_2066 at 2184.527 kb on + strand, within Dsui_2066 at 2184.527 kb on + strand at 2184.607 kb on + strand, within Dsui_2066 at 2184.693 kb on - strand, within Dsui_2066 at 2184.737 kb on + strand, within Dsui_2066 at 2184.766 kb on - strand, within Dsui_2066 at 2184.792 kb on - strand, within Dsui_2066 at 2184.926 kb on - strand, within Dsui_2066 at 2184.933 kb on - strand, within Dsui_2066 at 2185.019 kb on + strand, within Dsui_2066 at 2185.026 kb on - strand, within Dsui_2066 at 2185.135 kb on - strand at 2185.168 kb on - strand at 2185.168 kb on - strand at 2185.168 kb on - strand at 2185.223 kb on - strand at 2185.345 kb on + strand at 2185.389 kb on + strand at 2185.397 kb on - strand at 2185.419 kb on + strand at 2185.574 kb on - strand, within Dsui_2067 at 2185.579 kb on - strand, within Dsui_2067 at 2185.657 kb on + strand, within Dsui_2067 at 2185.673 kb on + strand, within Dsui_2067 at 2185.725 kb on + strand, within Dsui_2067 at 2185.920 kb on - strand, within Dsui_2067 at 2185.925 kb on - strand, within Dsui_2067 at 2185.931 kb on - strand, within Dsui_2067 at 2185.941 kb on - strand, within Dsui_2067 at 2186.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 2,183,411 + -0.9 2,183,421 + +1.1 2,183,488 + +1.1 2,183,506 - +1.1 2,183,559 - -0.9 2,183,619 + Dsui_2065 0.18 +1.1 2,183,640 - +0.1 2,183,640 - Dsui_2065 0.22 -1.2 2,183,657 - Dsui_2065 0.25 -0.2 2,183,779 - Dsui_2065 0.46 -0.9 2,183,794 - Dsui_2065 0.49 +1.1 2,183,795 - Dsui_2065 0.49 +1.1 2,183,863 - Dsui_2065 0.61 -0.0 2,183,890 + Dsui_2065 0.65 -0.9 2,183,952 - Dsui_2065 0.76 +0.1 2,184,012 - Dsui_2065 0.87 +0.3 2,184,068 + +1.1 2,184,095 + -0.9 2,184,101 - +2.1 2,184,244 + -1.2 2,184,254 - +1.1 2,184,288 - -1.0 2,184,445 + Dsui_2066 0.12 +1.0 2,184,527 + Dsui_2066 0.23 +0.0 2,184,527 + +1.0 2,184,607 + Dsui_2066 0.33 +1.0 2,184,693 - Dsui_2066 0.43 +0.3 2,184,737 + Dsui_2066 0.49 +1.0 2,184,766 - Dsui_2066 0.52 +0.3 2,184,792 - Dsui_2066 0.56 +0.3 2,184,926 - Dsui_2066 0.72 +0.1 2,184,933 - Dsui_2066 0.73 +0.9 2,185,019 + Dsui_2066 0.84 +1.0 2,185,026 - Dsui_2066 0.85 +0.1 2,185,135 - +0.6 2,185,168 - -0.1 2,185,168 - +0.1 2,185,168 - +0.4 2,185,223 - -0.0 2,185,345 + +1.0 2,185,389 + -0.5 2,185,397 - +0.3 2,185,419 + -1.0 2,185,574 - Dsui_2067 0.25 +0.1 2,185,579 - Dsui_2067 0.26 +0.0 2,185,657 + Dsui_2067 0.37 -2.0 2,185,673 + Dsui_2067 0.39 -1.0 2,185,725 + Dsui_2067 0.47 +0.0 2,185,920 - Dsui_2067 0.75 -0.2 2,185,925 - Dsui_2067 0.75 +0.2 2,185,931 - Dsui_2067 0.76 +0.0 2,185,941 - Dsui_2067 0.78 +0.1 2,186,092 + +1.0
Or see this region's nucleotide sequence