Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1753 and Dsui_1754 are separated by 15 nucleotides Dsui_1754 and Dsui_1755 are separated by 24 nucleotides Dsui_1755 and Dsui_1756 overlap by 11 nucleotides
Dsui_1753: Dsui_1753 - flagellar protein export ATPase FliI, at 1,839,183 to 1,840,598
_1753
Dsui_1754: Dsui_1754 - flagellar biosynthesis/type III secretory pathway protein, at 1,840,614 to 1,841,297
_1754
Dsui_1755: Dsui_1755 - flagellar motor switch protein FliG, at 1,841,322 to 1,842,323
_1755
Dsui_1756: Dsui_1756 - flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF, at 1,842,313 to 1,844,064
_1756
Position (kb)
1841
1842
1843 Strain fitness (log2 ratio)
-2
-1
0
1 at 1840.324 kb on + strand, within Dsui_1753 at 1840.480 kb on + strand at 1840.520 kb on + strand at 1840.525 kb on - strand at 1840.582 kb on - strand at 1840.598 kb on + strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.601 kb on - strand at 1840.862 kb on + strand, within Dsui_1754 at 1840.870 kb on - strand, within Dsui_1754 at 1841.006 kb on + strand at 1841.029 kb on + strand, within Dsui_1754 at 1841.089 kb on + strand, within Dsui_1754 at 1841.095 kb on + strand, within Dsui_1754 at 1841.139 kb on - strand, within Dsui_1754 at 1841.169 kb on - strand, within Dsui_1754 at 1841.227 kb on - strand, within Dsui_1754 at 1841.243 kb on + strand at 1841.333 kb on - strand at 1841.389 kb on + strand at 1841.439 kb on + strand, within Dsui_1755 at 1841.446 kb on + strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.454 kb on - strand, within Dsui_1755 at 1841.548 kb on - strand, within Dsui_1755 at 1841.645 kb on - strand, within Dsui_1755 at 1841.647 kb on - strand, within Dsui_1755 at 1841.727 kb on + strand, within Dsui_1755 at 1841.828 kb on + strand, within Dsui_1755 at 1841.860 kb on + strand, within Dsui_1755 at 1841.916 kb on - strand, within Dsui_1755 at 1842.089 kb on + strand, within Dsui_1755 at 1842.149 kb on + strand, within Dsui_1755 at 1842.174 kb on - strand, within Dsui_1755 at 1842.204 kb on - strand, within Dsui_1755 at 1842.221 kb on + strand, within Dsui_1755 at 1842.224 kb on + strand at 1842.291 kb on + strand at 1842.367 kb on - strand at 1842.405 kb on - strand at 1842.471 kb on - strand at 1842.521 kb on - strand, within Dsui_1756 at 1842.614 kb on - strand, within Dsui_1756 at 1842.692 kb on - strand, within Dsui_1756 at 1842.705 kb on + strand, within Dsui_1756 at 1842.710 kb on + strand, within Dsui_1756 at 1842.713 kb on - strand, within Dsui_1756 at 1842.715 kb on + strand, within Dsui_1756 at 1842.715 kb on + strand at 1842.723 kb on - strand, within Dsui_1756 at 1842.775 kb on + strand at 1842.775 kb on + strand at 1842.814 kb on + strand, within Dsui_1756 at 1842.814 kb on - strand, within Dsui_1756 at 1842.859 kb on - strand, within Dsui_1756 at 1842.965 kb on + strand, within Dsui_1756 at 1843.010 kb on + strand, within Dsui_1756 at 1843.017 kb on - strand, within Dsui_1756 at 1843.100 kb on + strand, within Dsui_1756 at 1843.181 kb on - strand, within Dsui_1756 at 1843.194 kb on - strand, within Dsui_1756 at 1843.300 kb on + strand, within Dsui_1756
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 1,840,324 + Dsui_1753 0.81 +0.8 1,840,480 + -1.8 1,840,520 + -0.2 1,840,525 - -0.1 1,840,582 - +0.2 1,840,598 + -0.8 1,840,601 - -0.0 1,840,601 - -0.2 1,840,601 - +0.3 1,840,862 + Dsui_1754 0.36 -1.2 1,840,870 - Dsui_1754 0.37 -0.1 1,841,006 + +0.8 1,841,029 + Dsui_1754 0.61 -0.8 1,841,089 + Dsui_1754 0.69 +0.8 1,841,095 + Dsui_1754 0.70 +0.8 1,841,139 - Dsui_1754 0.77 +0.3 1,841,169 - Dsui_1754 0.81 +0.1 1,841,227 - Dsui_1754 0.90 -0.5 1,841,243 + +0.8 1,841,333 - -0.1 1,841,389 + -2.4 1,841,439 + Dsui_1755 0.12 +0.6 1,841,446 + Dsui_1755 0.12 -0.2 1,841,454 - Dsui_1755 0.13 -0.1 1,841,454 - Dsui_1755 0.13 +0.1 1,841,548 - Dsui_1755 0.23 +0.0 1,841,645 - Dsui_1755 0.32 +0.0 1,841,647 - Dsui_1755 0.32 +0.4 1,841,727 + Dsui_1755 0.40 -0.8 1,841,828 + Dsui_1755 0.50 -0.8 1,841,860 + Dsui_1755 0.54 +0.8 1,841,916 - Dsui_1755 0.59 -0.1 1,842,089 + Dsui_1755 0.77 +0.8 1,842,149 + Dsui_1755 0.83 -1.2 1,842,174 - Dsui_1755 0.85 -0.2 1,842,204 - Dsui_1755 0.88 +0.1 1,842,221 + Dsui_1755 0.90 -0.2 1,842,224 + +0.8 1,842,291 + -1.2 1,842,367 - -0.0 1,842,405 - -0.5 1,842,471 - -0.2 1,842,521 - Dsui_1756 0.12 -0.1 1,842,614 - Dsui_1756 0.17 +0.0 1,842,692 - Dsui_1756 0.22 +0.1 1,842,705 + Dsui_1756 0.22 +0.8 1,842,710 + Dsui_1756 0.23 -0.8 1,842,713 - Dsui_1756 0.23 +0.0 1,842,715 + Dsui_1756 0.23 +0.8 1,842,715 + +0.8 1,842,723 - Dsui_1756 0.23 +0.4 1,842,775 + +0.8 1,842,775 + -0.2 1,842,814 + Dsui_1756 0.29 -1.5 1,842,814 - Dsui_1756 0.29 +0.2 1,842,859 - Dsui_1756 0.31 -0.1 1,842,965 + Dsui_1756 0.37 -0.2 1,843,010 + Dsui_1756 0.40 +0.8 1,843,017 - Dsui_1756 0.40 +0.0 1,843,100 + Dsui_1756 0.45 +0.8 1,843,181 - Dsui_1756 0.50 -0.1 1,843,194 - Dsui_1756 0.50 +0.3 1,843,300 + Dsui_1756 0.56 -0.2
Or see this region's nucleotide sequence