Strain Fitness in Dechlorosoma suillum PS around Dsui_1736

Experiment: ALP with Thallium(I) acetate 0.003 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDsui_1735 and Dsui_1736 are separated by 34 nucleotidesDsui_1736 and Dsui_1737 are separated by 25 nucleotidesDsui_1737 and Dsui_1738 are separated by 19 nucleotides Dsui_1735: Dsui_1735 - flagellar hook-basal body proteins, at 1,823,523 to 1,824,878 _1735 Dsui_1736: Dsui_1736 - flagellar basal-body rod protein FlgF, at 1,824,913 to 1,825,656 _1736 Dsui_1737: Dsui_1737 - flagellar basal-body rod protein FlgG, at 1,825,682 to 1,826,464 _1737 Dsui_1738: Dsui_1738 - flagellar basal body L-ring protein, at 1,826,484 to 1,827,149 _1738 Position (kb) 1824 1825 1826Strain fitness (log2 ratio) -3 -2 -1 0 1at 1824.019 kb on - strand, within Dsui_1735at 1824.025 kb on - strand, within Dsui_1735at 1824.053 kb on + strand, within Dsui_1735at 1824.073 kb on + strand, within Dsui_1735at 1824.105 kb on + strand, within Dsui_1735at 1824.131 kb on - strand, within Dsui_1735at 1824.199 kb on + strand, within Dsui_1735at 1824.206 kb on + strand, within Dsui_1735at 1824.219 kb on - strand, within Dsui_1735at 1824.226 kb on - strand, within Dsui_1735at 1824.241 kb on + strand, within Dsui_1735at 1824.268 kb on + strand, within Dsui_1735at 1824.271 kb on - strand, within Dsui_1735at 1824.276 kb on - strand, within Dsui_1735at 1824.276 kb on - strand, within Dsui_1735at 1824.292 kb on + strand, within Dsui_1735at 1824.292 kb on + strand, within Dsui_1735at 1824.300 kb on - strand, within Dsui_1735at 1824.302 kb on + strand, within Dsui_1735at 1824.340 kb on - strand, within Dsui_1735at 1824.389 kb on - strand, within Dsui_1735at 1824.400 kb on - strand, within Dsui_1735at 1824.424 kb on - strand, within Dsui_1735at 1824.474 kb on - strand, within Dsui_1735at 1824.504 kb on + strand, within Dsui_1735at 1824.559 kb on + strand, within Dsui_1735at 1824.562 kb on - strand, within Dsui_1735at 1824.564 kb on + strand, within Dsui_1735at 1824.606 kb on - strand, within Dsui_1735at 1824.606 kb on - strand, within Dsui_1735at 1824.612 kb on - strand, within Dsui_1735at 1824.621 kb on + strand, within Dsui_1735at 1824.647 kb on + strand, within Dsui_1735at 1824.755 kb on + strandat 1824.765 kb on + strandat 1824.772 kb on + strandat 1824.772 kb on + strandat 1824.780 kb on - strandat 1824.793 kb on + strandat 1824.816 kb on - strandat 1824.821 kb on + strandat 1824.875 kb on - strandat 1824.910 kb on + strandat 1824.924 kb on + strandat 1824.934 kb on + strandat 1824.969 kb on + strandat 1824.969 kb on + strandat 1824.979 kb on + strandat 1824.979 kb on + strandat 1824.979 kb on + strandat 1824.984 kb on + strandat 1825.004 kb on + strand, within Dsui_1736at 1825.040 kb on - strandat 1825.059 kb on + strand, within Dsui_1736at 1825.067 kb on - strand, within Dsui_1736at 1825.076 kb on + strand, within Dsui_1736at 1825.076 kb on + strand, within Dsui_1736at 1825.133 kb on - strand, within Dsui_1736at 1825.142 kb on + strand, within Dsui_1736at 1825.190 kb on + strand, within Dsui_1736at 1825.223 kb on + strand, within Dsui_1736at 1825.231 kb on - strand, within Dsui_1736at 1825.351 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strand, within Dsui_1736at 1825.358 kb on + strandat 1825.366 kb on - strand, within Dsui_1736at 1825.366 kb on - strandat 1825.436 kb on + strand, within Dsui_1736at 1825.511 kb on + strand, within Dsui_1736at 1825.511 kb on + strand, within Dsui_1736at 1825.519 kb on - strand, within Dsui_1736at 1825.617 kb on + strandat 1825.617 kb on + strandat 1825.625 kb on - strandat 1825.708 kb on + strandat 1825.748 kb on + strandat 1825.748 kb on + strandat 1825.801 kb on + strand, within Dsui_1737at 1825.801 kb on + strand, within Dsui_1737at 1825.801 kb on + strand, within Dsui_1737at 1825.848 kb on + strand, within Dsui_1737at 1825.856 kb on - strand, within Dsui_1737at 1825.893 kb on + strand, within Dsui_1737at 1825.963 kb on - strand, within Dsui_1737at 1826.018 kb on + strand, within Dsui_1737at 1826.018 kb on + strand, within Dsui_1737at 1826.018 kb on + strand, within Dsui_1737at 1826.026 kb on - strand, within Dsui_1737at 1826.070 kb on - strandat 1826.079 kb on + strand, within Dsui_1737at 1826.141 kb on - strand, within Dsui_1737at 1826.183 kb on + strand, within Dsui_1737at 1826.188 kb on + strand, within Dsui_1737at 1826.188 kb on + strand, within Dsui_1737at 1826.188 kb on + strand, within Dsui_1737at 1826.191 kb on - strand, within Dsui_1737at 1826.191 kb on - strand, within Dsui_1737at 1826.196 kb on - strand, within Dsui_1737at 1826.196 kb on - strand, within Dsui_1737at 1826.304 kb on - strand, within Dsui_1737at 1826.305 kb on - strand, within Dsui_1737at 1826.368 kb on + strand, within Dsui_1737at 1826.380 kb on + strand, within Dsui_1737at 1826.381 kb on + strand, within Dsui_1737at 1826.458 kb on + strandat 1826.461 kb on - strandat 1826.461 kb on - strandat 1826.556 kb on + strand, within Dsui_1738at 1826.565 kb on - strand, within Dsui_1738at 1826.567 kb on + strand, within Dsui_1738at 1826.567 kb on + strand, within Dsui_1738at 1826.581 kb on + strand, within Dsui_1738at 1826.581 kb on + strand, within Dsui_1738at 1826.641 kb on + strand, within Dsui_1738at 1826.649 kb on - strand, within Dsui_1738

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml
remove
1,824,019 - Dsui_1735 0.37 -1.9
1,824,025 - Dsui_1735 0.37 +0.7
1,824,053 + Dsui_1735 0.39 +0.7
1,824,073 + Dsui_1735 0.41 -3.3
1,824,105 + Dsui_1735 0.43 -1.6
1,824,131 - Dsui_1735 0.45 +0.7
1,824,199 + Dsui_1735 0.50 -0.3
1,824,206 + Dsui_1735 0.50 -1.6
1,824,219 - Dsui_1735 0.51 -0.9
1,824,226 - Dsui_1735 0.52 -1.3
1,824,241 + Dsui_1735 0.53 -0.3
1,824,268 + Dsui_1735 0.55 +1.7
1,824,271 - Dsui_1735 0.55 +0.7
1,824,276 - Dsui_1735 0.56 +0.7
1,824,276 - Dsui_1735 0.56 -1.3
1,824,292 + Dsui_1735 0.57 -1.3
1,824,292 + Dsui_1735 0.57 -1.1
1,824,300 - Dsui_1735 0.57 -1.6
1,824,302 + Dsui_1735 0.57 -0.3
1,824,340 - Dsui_1735 0.60 +0.7
1,824,389 - Dsui_1735 0.64 -0.3
1,824,400 - Dsui_1735 0.65 +0.7
1,824,424 - Dsui_1735 0.66 +0.7
1,824,474 - Dsui_1735 0.70 -0.9
1,824,504 + Dsui_1735 0.72 +0.2
1,824,559 + Dsui_1735 0.76 +0.7
1,824,562 - Dsui_1735 0.77 +0.7
1,824,564 + Dsui_1735 0.77 -1.6
1,824,606 - Dsui_1735 0.80 -0.3
1,824,606 - Dsui_1735 0.80 +0.7
1,824,612 - Dsui_1735 0.80 -0.9
1,824,621 + Dsui_1735 0.81 -0.9
1,824,647 + Dsui_1735 0.83 +0.7
1,824,755 + +0.5
1,824,765 + -1.6
1,824,772 + +0.7
1,824,772 + -0.9
1,824,780 - +0.7
1,824,793 + -2.9
1,824,816 - -0.1
1,824,821 + -0.3
1,824,875 - -0.3
1,824,910 + +0.7
1,824,924 + -1.9
1,824,934 + +0.7
1,824,969 + -0.9
1,824,969 + -0.3
1,824,979 + +0.7
1,824,979 + +0.7
1,824,979 + +0.7
1,824,984 + -1.6
1,825,004 + Dsui_1736 0.12 +0.7
1,825,040 - +0.7
1,825,059 + Dsui_1736 0.20 +0.7
1,825,067 - Dsui_1736 0.21 +0.7
1,825,076 + Dsui_1736 0.22 -0.3
1,825,076 + Dsui_1736 0.22 -1.3
1,825,133 - Dsui_1736 0.30 -0.3
1,825,142 + Dsui_1736 0.31 +0.7
1,825,190 + Dsui_1736 0.37 +0.7
1,825,223 + Dsui_1736 0.42 -1.8
1,825,231 - Dsui_1736 0.43 +0.7
1,825,351 + Dsui_1736 0.59 -0.8
1,825,358 + Dsui_1736 0.60 -1.1
1,825,358 + Dsui_1736 0.60 -0.3
1,825,358 + Dsui_1736 0.60 -1.5
1,825,358 + Dsui_1736 0.60 -1.3
1,825,358 + Dsui_1736 0.60 -1.4
1,825,358 + Dsui_1736 0.60 +0.7
1,825,358 + Dsui_1736 0.60 -0.3
1,825,358 + +0.7
1,825,366 - Dsui_1736 0.61 +0.7
1,825,366 - +0.7
1,825,436 + Dsui_1736 0.70 +0.7
1,825,511 + Dsui_1736 0.80 -1.6
1,825,511 + Dsui_1736 0.80 -1.9
1,825,519 - Dsui_1736 0.81 +0.7
1,825,617 + -0.9
1,825,617 + -2.3
1,825,625 - +0.7
1,825,708 + -0.3
1,825,748 + -1.6
1,825,748 + +1.3
1,825,801 + Dsui_1737 0.15 -3.4
1,825,801 + Dsui_1737 0.15 -1.9
1,825,801 + Dsui_1737 0.15 -0.9
1,825,848 + Dsui_1737 0.21 -0.3
1,825,856 - Dsui_1737 0.22 +0.7
1,825,893 + Dsui_1737 0.27 -0.3
1,825,963 - Dsui_1737 0.36 -0.3
1,826,018 + Dsui_1737 0.43 -0.3
1,826,018 + Dsui_1737 0.43 +0.1
1,826,018 + Dsui_1737 0.43 -0.7
1,826,026 - Dsui_1737 0.44 +0.1
1,826,070 - -0.3
1,826,079 + Dsui_1737 0.51 +0.7
1,826,141 - Dsui_1737 0.59 +0.7
1,826,183 + Dsui_1737 0.64 -1.3
1,826,188 + Dsui_1737 0.65 -0.9
1,826,188 + Dsui_1737 0.65 +0.7
1,826,188 + Dsui_1737 0.65 -0.3
1,826,191 - Dsui_1737 0.65 +0.7
1,826,191 - Dsui_1737 0.65 -0.3
1,826,196 - Dsui_1737 0.66 +0.7
1,826,196 - Dsui_1737 0.66 +0.7
1,826,304 - Dsui_1737 0.79 -0.3
1,826,305 - Dsui_1737 0.80 -0.3
1,826,368 + Dsui_1737 0.88 -1.6
1,826,380 + Dsui_1737 0.89 -1.1
1,826,381 + Dsui_1737 0.89 +0.7
1,826,458 + -0.9
1,826,461 - -0.3
1,826,461 - +0.7
1,826,556 + Dsui_1738 0.11 -0.9
1,826,565 - Dsui_1738 0.12 -0.3
1,826,567 + Dsui_1738 0.12 +0.7
1,826,567 + Dsui_1738 0.12 +0.7
1,826,581 + Dsui_1738 0.15 -1.3
1,826,581 + Dsui_1738 0.15 +0.7
1,826,641 + Dsui_1738 0.24 -0.9
1,826,649 - Dsui_1738 0.25 +0.7

Or see this region's nucleotide sequence