Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1490 and Dsui_1491 are separated by 32 nucleotides Dsui_1491 and Dsui_1492 are separated by 95 nucleotides Dsui_1492 and Dsui_1493 are separated by 16 nucleotides
Dsui_1490: Dsui_1490 - DNA-binding protein, excisionase family, at 1,552,611 to 1,552,883
_1490
Dsui_1491: Dsui_1491 - molecular chaperone (small heat shock protein), at 1,552,916 to 1,553,485
_1491
Dsui_1492: Dsui_1492 - ATPase with chaperone activity, ATP-binding subunit, at 1,553,581 to 1,556,430
_1492
Dsui_1493: Dsui_1493 - phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase, at 1,556,447 to 1,557,877
_1493
Position (kb)
1553
1554
1555
1556
1557 Strain fitness (log2 ratio)
-2
-1
0
1 at 1552.693 kb on - strand, within Dsui_1490 at 1552.703 kb on - strand, within Dsui_1490 at 1552.781 kb on + strand, within Dsui_1490 at 1552.791 kb on + strand, within Dsui_1490 at 1552.803 kb on - strand, within Dsui_1490 at 1552.971 kb on + strand at 1552.973 kb on + strand, within Dsui_1491 at 1552.979 kb on - strand, within Dsui_1491 at 1552.997 kb on - strand, within Dsui_1491 at 1553.048 kb on - strand, within Dsui_1491 at 1553.191 kb on - strand, within Dsui_1491 at 1553.209 kb on + strand, within Dsui_1491 at 1553.252 kb on + strand, within Dsui_1491 at 1553.309 kb on + strand, within Dsui_1491 at 1553.351 kb on + strand, within Dsui_1491 at 1553.394 kb on - strand, within Dsui_1491 at 1553.404 kb on - strand, within Dsui_1491 at 1553.418 kb on + strand, within Dsui_1491 at 1553.530 kb on - strand at 1553.540 kb on - strand at 1553.655 kb on - strand at 1554.068 kb on + strand, within Dsui_1492 at 1554.112 kb on - strand, within Dsui_1492 at 1554.162 kb on - strand, within Dsui_1492 at 1554.187 kb on - strand, within Dsui_1492 at 1554.404 kb on - strand, within Dsui_1492 at 1554.455 kb on - strand, within Dsui_1492 at 1554.704 kb on - strand, within Dsui_1492 at 1554.704 kb on - strand, within Dsui_1492 at 1554.738 kb on - strand, within Dsui_1492 at 1554.738 kb on - strand, within Dsui_1492 at 1554.973 kb on - strand at 1555.058 kb on - strand, within Dsui_1492 at 1555.184 kb on - strand, within Dsui_1492 at 1555.305 kb on + strand, within Dsui_1492 at 1555.324 kb on + strand, within Dsui_1492 at 1555.434 kb on + strand, within Dsui_1492 at 1555.437 kb on - strand, within Dsui_1492 at 1555.537 kb on + strand, within Dsui_1492 at 1555.572 kb on - strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.663 kb on + strand, within Dsui_1492 at 1555.766 kb on - strand, within Dsui_1492 at 1555.779 kb on - strand, within Dsui_1492 at 1555.943 kb on + strand, within Dsui_1492 at 1555.951 kb on - strand, within Dsui_1492 at 1556.112 kb on - strand, within Dsui_1492 at 1556.210 kb on - strand at 1556.259 kb on + strand at 1556.379 kb on - strand at 1556.448 kb on + strand at 1556.514 kb on - strand at 1556.558 kb on - strand at 1556.820 kb on - strand, within Dsui_1493 at 1556.825 kb on - strand, within Dsui_1493 at 1556.878 kb on + strand, within Dsui_1493 at 1556.977 kb on - strand, within Dsui_1493 at 1557.229 kb on + strand, within Dsui_1493 at 1557.233 kb on + strand, within Dsui_1493
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 1,552,693 - Dsui_1490 0.30 -0.3 1,552,703 - Dsui_1490 0.34 -0.3 1,552,781 + Dsui_1490 0.62 -0.9 1,552,791 + Dsui_1490 0.66 -1.7 1,552,803 - Dsui_1490 0.70 +0.7 1,552,971 + -1.7 1,552,973 + Dsui_1491 0.10 -0.7 1,552,979 - Dsui_1491 0.11 -0.9 1,552,997 - Dsui_1491 0.14 -0.3 1,553,048 - Dsui_1491 0.23 +0.7 1,553,191 - Dsui_1491 0.48 -1.9 1,553,209 + Dsui_1491 0.51 -0.3 1,553,252 + Dsui_1491 0.59 -0.3 1,553,309 + Dsui_1491 0.69 -0.3 1,553,351 + Dsui_1491 0.76 +0.3 1,553,394 - Dsui_1491 0.84 +0.7 1,553,404 - Dsui_1491 0.86 -2.7 1,553,418 + Dsui_1491 0.88 -0.9 1,553,530 - -1.9 1,553,540 - -2.3 1,553,655 - -0.9 1,554,068 + Dsui_1492 0.17 -0.5 1,554,112 - Dsui_1492 0.19 -0.3 1,554,162 - Dsui_1492 0.20 -1.7 1,554,187 - Dsui_1492 0.21 +0.7 1,554,404 - Dsui_1492 0.29 -0.3 1,554,455 - Dsui_1492 0.31 +0.7 1,554,704 - Dsui_1492 0.39 +0.7 1,554,704 - Dsui_1492 0.39 -1.3 1,554,738 - Dsui_1492 0.41 +0.2 1,554,738 - Dsui_1492 0.41 -1.3 1,554,973 - +0.7 1,555,058 - Dsui_1492 0.52 -0.3 1,555,184 - Dsui_1492 0.56 -1.3 1,555,305 + Dsui_1492 0.60 -1.2 1,555,324 + Dsui_1492 0.61 -1.0 1,555,434 + Dsui_1492 0.65 -0.5 1,555,437 - Dsui_1492 0.65 -0.3 1,555,537 + Dsui_1492 0.69 -0.8 1,555,572 - Dsui_1492 0.70 -1.3 1,555,663 + Dsui_1492 0.73 -0.4 1,555,663 + Dsui_1492 0.73 -0.4 1,555,663 + Dsui_1492 0.73 -1.7 1,555,766 - Dsui_1492 0.77 -1.3 1,555,779 - Dsui_1492 0.77 -2.5 1,555,943 + Dsui_1492 0.83 +0.1 1,555,951 - Dsui_1492 0.83 +0.7 1,556,112 - Dsui_1492 0.89 +0.7 1,556,210 - +0.7 1,556,259 + -1.4 1,556,379 - -1.6 1,556,448 + -0.9 1,556,514 - +0.7 1,556,558 - -1.3 1,556,820 - Dsui_1493 0.26 +0.7 1,556,825 - Dsui_1493 0.26 -0.3 1,556,878 + Dsui_1493 0.30 -0.3 1,556,977 - Dsui_1493 0.37 -0.3 1,557,229 + Dsui_1493 0.55 +0.7 1,557,233 + Dsui_1493 0.55 -1.3
Or see this region's nucleotide sequence