Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1207 and Dsui_1208 are separated by 134 nucleotides Dsui_1208 and Dsui_1209 are separated by 17 nucleotides
Dsui_1207: Dsui_1207 - putative calcium-binding protein, at 1,258,271 to 1,265,536
_1207
Dsui_1208: Dsui_1208 - tRNA-Met, at 1,265,671 to 1,265,747
_1208
Dsui_1209: Dsui_1209 - RNA polymerase sigma factor, sigma-70 family, at 1,265,765 to 1,267,735
_1209
Position (kb)
1265
1266 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1264.681 kb on + strand, within Dsui_1207 at 1264.687 kb on + strand, within Dsui_1207 at 1264.695 kb on - strand, within Dsui_1207 at 1264.703 kb on + strand, within Dsui_1207 at 1264.713 kb on + strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.773 kb on - strand, within Dsui_1207 at 1264.793 kb on + strand, within Dsui_1207 at 1264.800 kb on + strand at 1264.837 kb on + strand at 1264.902 kb on + strand at 1264.902 kb on + strand at 1264.904 kb on + strand at 1264.954 kb on + strand at 1264.955 kb on + strand at 1264.977 kb on - strand at 1264.984 kb on + strand at 1264.994 kb on + strand at 1265.002 kb on - strand at 1265.005 kb on + strand at 1265.046 kb on - strand at 1265.046 kb on - strand at 1265.050 kb on + strand at 1265.090 kb on + strand at 1265.110 kb on + strand at 1265.117 kb on + strand at 1265.118 kb on - strand at 1265.118 kb on - strand at 1265.118 kb on - strand at 1265.141 kb on + strand at 1265.146 kb on + strand at 1265.184 kb on - strand at 1265.193 kb on + strand at 1265.203 kb on + strand at 1265.246 kb on + strand at 1265.248 kb on + strand at 1265.262 kb on - strand at 1265.273 kb on - strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.302 kb on + strand at 1265.325 kb on - strand at 1265.398 kb on - strand at 1265.433 kb on + strand at 1265.437 kb on + strand at 1265.437 kb on + strand at 1265.437 kb on + strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.445 kb on - strand at 1265.488 kb on - strand at 1265.499 kb on - strand at 1265.507 kb on - strand at 1265.529 kb on - strand at 1265.559 kb on + strand at 1265.559 kb on + strand at 1265.559 kb on + strand at 1265.562 kb on + strand at 1265.567 kb on - strand at 1265.620 kb on - strand at 1265.743 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 1,264,681 + Dsui_1207 0.88 -0.4 1,264,687 + Dsui_1207 0.88 +0.2 1,264,695 - Dsui_1207 0.88 -2.9 1,264,703 + Dsui_1207 0.89 -0.4 1,264,713 + Dsui_1207 0.89 +0.6 1,264,773 - Dsui_1207 0.89 -1.0 1,264,773 - Dsui_1207 0.89 -1.5 1,264,773 - Dsui_1207 0.89 +0.6 1,264,773 - Dsui_1207 0.89 +0.6 1,264,793 + Dsui_1207 0.90 -1.0 1,264,800 + +0.6 1,264,837 + +0.6 1,264,902 + +0.6 1,264,902 + -1.0 1,264,904 + -1.0 1,264,954 + -0.4 1,264,955 + +0.6 1,264,977 - +2.2 1,264,984 + -2.2 1,264,994 + -1.4 1,265,002 - -0.4 1,265,005 + -0.4 1,265,046 - -2.2 1,265,046 - -1.8 1,265,050 + -0.4 1,265,090 + +0.6 1,265,110 + -1.0 1,265,117 + +0.6 1,265,118 - +0.6 1,265,118 - -1.0 1,265,118 - +0.6 1,265,141 + +0.6 1,265,146 + -1.0 1,265,184 - +0.6 1,265,193 + -1.2 1,265,203 + -0.4 1,265,246 + -1.0 1,265,248 + -1.6 1,265,262 - -0.4 1,265,273 - -0.4 1,265,302 + -2.0 1,265,302 + -0.4 1,265,302 + -1.0 1,265,302 + -0.8 1,265,302 + -0.7 1,265,302 + -0.4 1,265,325 - -3.2 1,265,398 - -1.0 1,265,433 + -0.4 1,265,437 + +2.2 1,265,437 + -0.5 1,265,437 + +0.1 1,265,445 - -0.4 1,265,445 - -0.4 1,265,445 - -0.4 1,265,445 - +0.6 1,265,445 - -1.0 1,265,445 - -0.4 1,265,488 - +1.9 1,265,499 - +0.3 1,265,507 - +0.1 1,265,529 - +0.6 1,265,559 + -1.1 1,265,559 + -2.9 1,265,559 + -3.2 1,265,562 + -0.8 1,265,567 - -1.4 1,265,620 - -1.0 1,265,743 + -1.2
Or see this region's nucleotide sequence