Strain Fitness in Dechlorosoma suillum PS around Dsui_1066

Experiment: ALP with Thallium(I) acetate 0.003 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1065 and Dsui_1066 are separated by 177 nucleotidesDsui_1066 and Dsui_1067 are separated by 15 nucleotides Dsui_1065: Dsui_1065 - copper/silver-translocating P-type ATPase, at 1,098,449 to 1,100,668 _1065 Dsui_1066: Dsui_1066 - copper chaperone, at 1,100,846 to 1,101,055 _1066 Dsui_1067: Dsui_1067 - heavy metal sensor kinase, at 1,101,071 to 1,102,438 _1067 Position (kb) 1100 1101 1102Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1099.955 kb on + strand, within Dsui_1065at 1099.963 kb on + strand, within Dsui_1065at 1099.985 kb on - strand, within Dsui_1065at 1099.993 kb on + strand, within Dsui_1065at 1099.995 kb on + strand, within Dsui_1065at 1100.017 kb on + strand, within Dsui_1065at 1100.018 kb on + strand, within Dsui_1065at 1100.074 kb on + strand, within Dsui_1065at 1100.074 kb on + strand, within Dsui_1065at 1100.081 kb on + strand, within Dsui_1065at 1100.082 kb on - strand, within Dsui_1065at 1100.089 kb on + strand, within Dsui_1065at 1100.134 kb on - strand, within Dsui_1065at 1100.161 kb on - strand, within Dsui_1065at 1100.162 kb on + strand, within Dsui_1065at 1100.162 kb on + strand, within Dsui_1065at 1100.162 kb on + strand, within Dsui_1065at 1100.162 kb on + strand, within Dsui_1065at 1100.162 kb on + strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.170 kb on - strand, within Dsui_1065at 1100.186 kb on - strand, within Dsui_1065at 1100.240 kb on - strand, within Dsui_1065at 1100.257 kb on - strand, within Dsui_1065at 1100.259 kb on + strand, within Dsui_1065at 1100.277 kb on - strand, within Dsui_1065at 1100.279 kb on + strand, within Dsui_1065at 1100.329 kb on + strand, within Dsui_1065at 1100.433 kb on + strand, within Dsui_1065at 1100.512 kb on - strandat 1100.518 kb on + strandat 1100.536 kb on - strandat 1100.554 kb on - strandat 1100.556 kb on - strandat 1100.564 kb on - strandat 1100.592 kb on + strandat 1100.599 kb on + strandat 1100.607 kb on - strandat 1100.640 kb on - strandat 1100.662 kb on - strandat 1100.664 kb on + strandat 1100.666 kb on + strandat 1100.670 kb on + strandat 1100.673 kb on - strandat 1100.673 kb on - strandat 1100.675 kb on + strandat 1100.675 kb on + strandat 1100.683 kb on + strandat 1100.683 kb on - strandat 1100.683 kb on - strandat 1100.683 kb on - strandat 1100.691 kb on - strandat 1100.691 kb on - strandat 1100.730 kb on - strandat 1100.730 kb on - strandat 1100.730 kb on - strandat 1100.730 kb on - strandat 1100.730 kb on - strandat 1100.774 kb on + strandat 1100.774 kb on + strandat 1100.774 kb on + strandat 1100.774 kb on + strandat 1100.774 kb on + strandat 1100.782 kb on - strandat 1100.782 kb on - strandat 1100.782 kb on - strandat 1100.782 kb on - strandat 1100.782 kb on - strandat 1100.782 kb on - strandat 1100.789 kb on - strandat 1100.798 kb on + strandat 1100.799 kb on - strandat 1100.813 kb on + strandat 1100.816 kb on - strandat 1100.861 kb on - strandat 1100.867 kb on + strand, within Dsui_1066at 1100.875 kb on - strand, within Dsui_1066at 1100.882 kb on + strand, within Dsui_1066at 1100.907 kb on - strand, within Dsui_1066at 1100.943 kb on - strand, within Dsui_1066at 1100.946 kb on + strand, within Dsui_1066at 1100.954 kb on - strand, within Dsui_1066at 1100.954 kb on - strand, within Dsui_1066at 1100.954 kb on - strand, within Dsui_1066at 1100.954 kb on - strand, within Dsui_1066at 1100.954 kb on - strand, within Dsui_1066at 1100.970 kb on - strand, within Dsui_1066at 1100.982 kb on + strand, within Dsui_1066at 1100.988 kb on + strand, within Dsui_1066at 1100.988 kb on + strand, within Dsui_1066at 1100.988 kb on + strand, within Dsui_1066at 1100.988 kb on + strand, within Dsui_1066at 1100.988 kb on + strand, within Dsui_1066at 1100.990 kb on - strand, within Dsui_1066at 1100.990 kb on - strand, within Dsui_1066at 1100.996 kb on - strand, within Dsui_1066at 1100.996 kb on - strand, within Dsui_1066at 1100.996 kb on - strand, within Dsui_1066at 1100.998 kb on + strand, within Dsui_1066at 1100.998 kb on + strand, within Dsui_1066at 1100.998 kb on + strand, within Dsui_1066at 1101.004 kb on - strand, within Dsui_1066at 1101.006 kb on - strand, within Dsui_1066at 1101.006 kb on - strand, within Dsui_1066at 1101.034 kb on + strand, within Dsui_1066at 1101.042 kb on - strandat 1101.050 kb on + strandat 1101.057 kb on - strandat 1101.066 kb on - strandat 1101.069 kb on + strandat 1101.074 kb on + strandat 1101.084 kb on + strandat 1101.097 kb on + strandat 1101.105 kb on - strandat 1101.105 kb on - strandat 1101.123 kb on - strandat 1101.140 kb on + strandat 1101.140 kb on + strandat 1101.148 kb on - strandat 1101.179 kb on + strandat 1101.179 kb on + strandat 1101.179 kb on + strandat 1101.179 kb on + strandat 1101.187 kb on - strandat 1101.187 kb on - strandat 1101.192 kb on + strandat 1101.206 kb on - strandat 1101.208 kb on + strand, within Dsui_1067at 1101.208 kb on + strand, within Dsui_1067at 1101.210 kb on - strand, within Dsui_1067at 1101.256 kb on + strand, within Dsui_1067at 1101.256 kb on + strand, within Dsui_1067at 1101.264 kb on - strand, within Dsui_1067at 1101.264 kb on - strand, within Dsui_1067at 1101.269 kb on + strand, within Dsui_1067at 1101.269 kb on + strand, within Dsui_1067at 1101.277 kb on - strand, within Dsui_1067at 1101.284 kb on + strand, within Dsui_1067at 1101.306 kb on + strand, within Dsui_1067at 1101.351 kb on - strand, within Dsui_1067at 1101.377 kb on - strand, within Dsui_1067at 1101.397 kb on + strand, within Dsui_1067at 1101.398 kb on - strand, within Dsui_1067at 1101.404 kb on + strand, within Dsui_1067at 1101.405 kb on - strand, within Dsui_1067at 1101.424 kb on + strand, within Dsui_1067at 1101.429 kb on + strand, within Dsui_1067at 1101.437 kb on - strand, within Dsui_1067at 1101.450 kb on - strand, within Dsui_1067at 1101.450 kb on - strand, within Dsui_1067at 1101.452 kb on + strand, within Dsui_1067at 1101.452 kb on - strand, within Dsui_1067at 1101.460 kb on - strand, within Dsui_1067at 1101.461 kb on + strand, within Dsui_1067at 1101.461 kb on + strand, within Dsui_1067at 1101.476 kb on - strand, within Dsui_1067at 1101.495 kb on - strand, within Dsui_1067at 1101.507 kb on - strand, within Dsui_1067at 1101.543 kb on + strand, within Dsui_1067at 1101.563 kb on + strand, within Dsui_1067at 1101.598 kb on - strand, within Dsui_1067at 1101.612 kb on + strand, within Dsui_1067at 1101.632 kb on + strand, within Dsui_1067at 1101.632 kb on + strand, within Dsui_1067at 1101.635 kb on - strand, within Dsui_1067at 1101.640 kb on - strand, within Dsui_1067at 1101.648 kb on + strand, within Dsui_1067at 1101.656 kb on - strand, within Dsui_1067at 1101.656 kb on - strand, within Dsui_1067at 1101.681 kb on - strand, within Dsui_1067at 1101.683 kb on - strand, within Dsui_1067at 1101.691 kb on - strand, within Dsui_1067at 1101.701 kb on + strand, within Dsui_1067at 1101.701 kb on + strand, within Dsui_1067at 1101.701 kb on - strand, within Dsui_1067at 1101.751 kb on + strand, within Dsui_1067at 1101.759 kb on - strand, within Dsui_1067at 1101.814 kb on + strand, within Dsui_1067at 1101.841 kb on + strand, within Dsui_1067at 1101.846 kb on + strand, within Dsui_1067at 1101.846 kb on + strand, within Dsui_1067at 1101.851 kb on + strand, within Dsui_1067at 1101.954 kb on + strand, within Dsui_1067at 1101.962 kb on - strand, within Dsui_1067at 1102.012 kb on + strand, within Dsui_1067at 1102.033 kb on + strand, within Dsui_1067

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml
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1,099,955 + Dsui_1065 0.68 +0.8
1,099,963 + Dsui_1065 0.68 +0.8
1,099,985 - Dsui_1065 0.69 +0.8
1,099,993 + Dsui_1065 0.70 +0.8
1,099,995 + Dsui_1065 0.70 -2.7
1,100,017 + Dsui_1065 0.71 -1.2
1,100,018 + Dsui_1065 0.71 +0.8
1,100,074 + Dsui_1065 0.73 +0.8
1,100,074 + Dsui_1065 0.73 -0.2
1,100,081 + Dsui_1065 0.74 +0.8
1,100,082 - Dsui_1065 0.74 -0.8
1,100,089 + Dsui_1065 0.74 +0.8
1,100,134 - Dsui_1065 0.76 -0.2
1,100,161 - Dsui_1065 0.77 -0.2
1,100,162 + Dsui_1065 0.77 -1.5
1,100,162 + Dsui_1065 0.77 +0.8
1,100,162 + Dsui_1065 0.77 -0.8
1,100,162 + Dsui_1065 0.77 +0.8
1,100,162 + Dsui_1065 0.77 +0.8
1,100,170 - Dsui_1065 0.78 -0.4
1,100,170 - Dsui_1065 0.78 -0.6
1,100,170 - Dsui_1065 0.78 -0.4
1,100,170 - Dsui_1065 0.78 +0.1
1,100,170 - Dsui_1065 0.78 -0.2
1,100,170 - Dsui_1065 0.78 -0.2
1,100,186 - Dsui_1065 0.78 +0.8
1,100,240 - Dsui_1065 0.81 -0.2
1,100,257 - Dsui_1065 0.81 -0.8
1,100,259 + Dsui_1065 0.82 -2.2
1,100,277 - Dsui_1065 0.82 -0.2
1,100,279 + Dsui_1065 0.82 +0.8
1,100,329 + Dsui_1065 0.85 -0.2
1,100,433 + Dsui_1065 0.89 +0.8
1,100,512 - +0.8
1,100,518 + -0.2
1,100,536 - +0.8
1,100,554 - -1.8
1,100,556 - +0.8
1,100,564 - +0.8
1,100,592 + +0.8
1,100,599 + +0.8
1,100,607 - +0.8
1,100,640 - +0.8
1,100,662 - +0.8
1,100,664 + +0.8
1,100,666 + -0.3
1,100,670 + +0.8
1,100,673 - +0.8
1,100,673 - -1.2
1,100,675 + +0.8
1,100,675 + +0.8
1,100,683 + +0.8
1,100,683 - +0.8
1,100,683 - -1.5
1,100,683 - -1.5
1,100,691 - -2.0
1,100,691 - -0.2
1,100,730 - +0.8
1,100,730 - -1.2
1,100,730 - +0.8
1,100,730 - +0.8
1,100,730 - -0.2
1,100,774 + -0.2
1,100,774 + -1.5
1,100,774 + -0.8
1,100,774 + -0.8
1,100,774 + -2.2
1,100,782 - +0.8
1,100,782 - -0.2
1,100,782 - +0.8
1,100,782 - +0.8
1,100,782 - -0.8
1,100,782 - -0.8
1,100,789 - +0.8
1,100,798 + +0.8
1,100,799 - -0.2
1,100,813 + +0.8
1,100,816 - -0.2
1,100,861 - -0.2
1,100,867 + Dsui_1066 0.10 -0.2
1,100,875 - Dsui_1066 0.14 -0.2
1,100,882 + Dsui_1066 0.17 -0.8
1,100,907 - Dsui_1066 0.29 +0.8
1,100,943 - Dsui_1066 0.46 +0.8
1,100,946 + Dsui_1066 0.48 +0.8
1,100,954 - Dsui_1066 0.51 +0.8
1,100,954 - Dsui_1066 0.51 -0.2
1,100,954 - Dsui_1066 0.51 +0.8
1,100,954 - Dsui_1066 0.51 +0.8
1,100,954 - Dsui_1066 0.51 +0.8
1,100,970 - Dsui_1066 0.59 -1.5
1,100,982 + Dsui_1066 0.65 -0.2
1,100,988 + Dsui_1066 0.68 +0.8
1,100,988 + Dsui_1066 0.68 +0.8
1,100,988 + Dsui_1066 0.68 -1.2
1,100,988 + Dsui_1066 0.68 +0.8
1,100,988 + Dsui_1066 0.68 -0.8
1,100,990 - Dsui_1066 0.69 +0.8
1,100,990 - Dsui_1066 0.69 -0.8
1,100,996 - Dsui_1066 0.71 -0.2
1,100,996 - Dsui_1066 0.71 -0.2
1,100,996 - Dsui_1066 0.71 -0.2
1,100,998 + Dsui_1066 0.72 -0.2
1,100,998 + Dsui_1066 0.72 -0.2
1,100,998 + Dsui_1066 0.72 -1.8
1,101,004 - Dsui_1066 0.75 +0.8
1,101,006 - Dsui_1066 0.76 -0.8
1,101,006 - Dsui_1066 0.76 +0.8
1,101,034 + Dsui_1066 0.90 +0.8
1,101,042 - +0.8
1,101,050 + +0.8
1,101,057 - -0.2
1,101,066 - +0.8
1,101,069 + -1.5
1,101,074 + -0.8
1,101,084 + +0.8
1,101,097 + +0.8
1,101,105 - -2.8
1,101,105 - -0.2
1,101,123 - -1.5
1,101,140 + -0.8
1,101,140 + +0.8
1,101,148 - +0.8
1,101,179 + -0.8
1,101,179 + +0.8
1,101,179 + +0.8
1,101,179 + +0.8
1,101,187 - -0.2
1,101,187 - +0.8
1,101,192 + -0.2
1,101,206 - -1.2
1,101,208 + Dsui_1067 0.10 +0.8
1,101,208 + Dsui_1067 0.10 +0.8
1,101,210 - Dsui_1067 0.10 +0.8
1,101,256 + Dsui_1067 0.14 -1.2
1,101,256 + Dsui_1067 0.14 -0.2
1,101,264 - Dsui_1067 0.14 +0.8
1,101,264 - Dsui_1067 0.14 +0.8
1,101,269 + Dsui_1067 0.14 +0.8
1,101,269 + Dsui_1067 0.14 -0.2
1,101,277 - Dsui_1067 0.15 +0.8
1,101,284 + Dsui_1067 0.16 +0.8
1,101,306 + Dsui_1067 0.17 -1.5
1,101,351 - Dsui_1067 0.20 +0.8
1,101,377 - Dsui_1067 0.22 -0.8
1,101,397 + Dsui_1067 0.24 -0.2
1,101,398 - Dsui_1067 0.24 -0.2
1,101,404 + Dsui_1067 0.24 +0.8
1,101,405 - Dsui_1067 0.24 +0.8
1,101,424 + Dsui_1067 0.26 -1.2
1,101,429 + Dsui_1067 0.26 +0.8
1,101,437 - Dsui_1067 0.27 +0.8
1,101,450 - Dsui_1067 0.28 +0.8
1,101,450 - Dsui_1067 0.28 -0.8
1,101,452 + Dsui_1067 0.28 +0.8
1,101,452 - Dsui_1067 0.28 -1.2
1,101,460 - Dsui_1067 0.28 -0.2
1,101,461 + Dsui_1067 0.29 +0.8
1,101,461 + Dsui_1067 0.29 -0.2
1,101,476 - Dsui_1067 0.30 -0.2
1,101,495 - Dsui_1067 0.31 +0.8
1,101,507 - Dsui_1067 0.32 +0.8
1,101,543 + Dsui_1067 0.35 -0.8
1,101,563 + Dsui_1067 0.36 +0.8
1,101,598 - Dsui_1067 0.39 -2.8
1,101,612 + Dsui_1067 0.40 +0.8
1,101,632 + Dsui_1067 0.41 -1.5
1,101,632 + Dsui_1067 0.41 +0.8
1,101,635 - Dsui_1067 0.41 -0.2
1,101,640 - Dsui_1067 0.42 +2.4
1,101,648 + Dsui_1067 0.42 +0.8
1,101,656 - Dsui_1067 0.43 +0.8
1,101,656 - Dsui_1067 0.43 +0.8
1,101,681 - Dsui_1067 0.45 -1.2
1,101,683 - Dsui_1067 0.45 -0.2
1,101,691 - Dsui_1067 0.45 -0.2
1,101,701 + Dsui_1067 0.46 +0.8
1,101,701 + Dsui_1067 0.46 +0.8
1,101,701 - Dsui_1067 0.46 -1.2
1,101,751 + Dsui_1067 0.50 -1.2
1,101,759 - Dsui_1067 0.50 -1.2
1,101,814 + Dsui_1067 0.54 +0.8
1,101,841 + Dsui_1067 0.56 +0.8
1,101,846 + Dsui_1067 0.57 -0.2
1,101,846 + Dsui_1067 0.57 +0.8
1,101,851 + Dsui_1067 0.57 +0.8
1,101,954 + Dsui_1067 0.65 -0.2
1,101,962 - Dsui_1067 0.65 -0.8
1,102,012 + Dsui_1067 0.69 -0.8
1,102,033 + Dsui_1067 0.70 +0.8

Or see this region's nucleotide sequence