Strain Fitness in Dechlorosoma suillum PS around Dsui_0862

Experiment: ALP with Thallium(I) acetate 0.003 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0860 and Dsui_0861 are separated by 33 nucleotidesDsui_0861 and Dsui_0862 are separated by 40 nucleotidesDsui_0862 and Dsui_0863 are separated by 154 nucleotidesDsui_0863 and Dsui_0864 are separated by 40 nucleotides Dsui_0860: Dsui_0860 - hypothetical protein, at 875,269 to 876,180 _0860 Dsui_0861: Dsui_0861 - ubiquinone/menaquinone biosynthesis methyltransferase, at 876,214 to 876,948 _0861 Dsui_0862: Dsui_0862 - hypothetical protein, at 876,989 to 877,414 _0862 Dsui_0863: Dsui_0863 - phosphate regulon transcriptional regulatory protein PhoB, at 877,569 to 878,261 _0863 Dsui_0864: Dsui_0864 - phosphate regulon sensor kinase PhoR, at 878,302 to 879,603 _0864 Position (kb) 876 877 878Strain fitness (log2 ratio) -2 -1 0 1 2at 876.133 kb on + strandat 876.154 kb on + strandat 876.164 kb on + strandat 876.164 kb on + strandat 876.995 kb on - strandat 876.995 kb on - strandat 876.995 kb on - strandat 877.090 kb on + strand, within Dsui_0862at 877.120 kb on + strandat 877.164 kb on + strand, within Dsui_0862at 877.286 kb on - strand, within Dsui_0862at 877.412 kb on - strandat 877.424 kb on - strandat 877.442 kb on + strandat 877.463 kb on - strandat 877.463 kb on - strandat 877.463 kb on - strandat 877.463 kb on - strandat 877.466 kb on + strandat 877.481 kb on - strandat 877.528 kb on + strandat 877.532 kb on - strandat 877.548 kb on + strandat 877.548 kb on + strandat 877.548 kb on + strandat 877.548 kb on + strandat 877.556 kb on - strandat 877.558 kb on + strandat 877.572 kb on - strandat 877.575 kb on + strandat 877.591 kb on + strandat 877.602 kb on + strandat 877.610 kb on - strandat 877.645 kb on + strand, within Dsui_0863at 877.649 kb on - strand, within Dsui_0863at 877.716 kb on + strand, within Dsui_0863at 877.787 kb on + strand, within Dsui_0863at 877.812 kb on - strandat 877.850 kb on + strand, within Dsui_0863at 877.850 kb on + strand, within Dsui_0863at 877.913 kb on + strand, within Dsui_0863at 877.915 kb on - strand, within Dsui_0863at 877.918 kb on + strand, within Dsui_0863at 877.931 kb on - strandat 877.950 kb on + strand, within Dsui_0863at 878.038 kb on - strand, within Dsui_0863at 878.045 kb on + strand, within Dsui_0863at 878.114 kb on + strand, within Dsui_0863at 878.114 kb on + strand, within Dsui_0863at 878.122 kb on - strand, within Dsui_0863at 878.122 kb on - strand, within Dsui_0863at 878.157 kb on + strand, within Dsui_0863at 878.157 kb on - strandat 878.189 kb on - strand, within Dsui_0863at 878.210 kb on + strandat 878.228 kb on - strandat 878.312 kb on - strandat 878.346 kb on + strandat 878.358 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml
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876,133 + +0.7
876,154 + +0.7
876,164 + -0.3
876,164 + -1.3
876,995 - -0.0
876,995 - -0.3
876,995 - -0.4
877,090 + Dsui_0862 0.24 +1.7
877,120 + +2.3
877,164 + Dsui_0862 0.41 -1.3
877,286 - Dsui_0862 0.70 -0.7
877,412 - +0.0
877,424 - -0.3
877,442 + +0.7
877,463 - +0.7
877,463 - +0.7
877,463 - -0.3
877,463 - -0.3
877,466 + -0.9
877,481 - -0.3
877,528 + -1.1
877,532 - -1.3
877,548 + +1.7
877,548 + -0.6
877,548 + -1.9
877,548 + -1.3
877,556 - +0.7
877,558 + +0.7
877,572 - -2.1
877,575 + -0.6
877,591 + +0.1
877,602 + -0.6
877,610 - +0.7
877,645 + Dsui_0863 0.11 +0.9
877,649 - Dsui_0863 0.12 +0.7
877,716 + Dsui_0863 0.21 +0.1
877,787 + Dsui_0863 0.31 +0.3
877,812 - +0.7
877,850 + Dsui_0863 0.41 -1.0
877,850 + Dsui_0863 0.41 -1.2
877,913 + Dsui_0863 0.50 +1.7
877,915 - Dsui_0863 0.50 -1.6
877,918 + Dsui_0863 0.50 -0.5
877,931 - +0.7
877,950 + Dsui_0863 0.55 -0.6
878,038 - Dsui_0863 0.68 -0.1
878,045 + Dsui_0863 0.69 +0.9
878,114 + Dsui_0863 0.79 -0.1
878,114 + Dsui_0863 0.79 -1.2
878,122 - Dsui_0863 0.80 -0.9
878,122 - Dsui_0863 0.80 -1.3
878,157 + Dsui_0863 0.85 +0.1
878,157 - -0.9
878,189 - Dsui_0863 0.89 -0.9
878,210 + +0.8
878,228 - -0.3
878,312 - -1.3
878,346 + +0.1
878,358 + +1.3

Or see this region's nucleotide sequence