Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0803 and Dsui_0804 are separated by 10 nucleotides Dsui_0804 and Dsui_0805 are separated by 200 nucleotides
Dsui_0803: Dsui_0803 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 808,916 to 811,168
_0803
Dsui_0804: Dsui_0804 - hypothetical protein, at 811,179 to 812,312
_0804
Dsui_0805: Dsui_0805 - primosomal protein N'', at 812,513 to 814,537
_0805
Position (kb)
811
812
813 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 810.228 kb on + strand, within Dsui_0803 at 810.235 kb on + strand, within Dsui_0803 at 810.236 kb on - strand, within Dsui_0803 at 810.305 kb on - strand, within Dsui_0803 at 810.336 kb on + strand, within Dsui_0803 at 810.343 kb on + strand, within Dsui_0803 at 810.389 kb on + strand, within Dsui_0803 at 810.422 kb on + strand, within Dsui_0803 at 810.425 kb on - strand at 810.505 kb on + strand, within Dsui_0803 at 810.528 kb on - strand, within Dsui_0803 at 810.543 kb on + strand, within Dsui_0803 at 810.578 kb on - strand, within Dsui_0803 at 810.611 kb on - strand, within Dsui_0803 at 810.624 kb on - strand, within Dsui_0803 at 810.657 kb on + strand, within Dsui_0803 at 810.675 kb on + strand, within Dsui_0803 at 810.675 kb on + strand, within Dsui_0803 at 810.704 kb on - strand, within Dsui_0803 at 810.715 kb on - strand, within Dsui_0803 at 810.740 kb on - strand, within Dsui_0803 at 810.743 kb on + strand, within Dsui_0803 at 810.746 kb on - strand, within Dsui_0803 at 810.751 kb on - strand, within Dsui_0803 at 810.751 kb on - strand, within Dsui_0803 at 810.752 kb on - strand, within Dsui_0803 at 810.768 kb on + strand, within Dsui_0803 at 810.776 kb on - strand, within Dsui_0803 at 810.776 kb on - strand, within Dsui_0803 at 810.776 kb on - strand, within Dsui_0803 at 810.779 kb on + strand, within Dsui_0803 at 810.784 kb on + strand, within Dsui_0803 at 810.848 kb on - strand, within Dsui_0803 at 810.867 kb on - strand, within Dsui_0803 at 810.904 kb on + strand, within Dsui_0803 at 810.923 kb on + strand, within Dsui_0803 at 810.961 kb on + strand at 810.991 kb on + strand at 810.998 kb on + strand at 811.057 kb on - strand at 811.059 kb on + strand at 811.059 kb on + strand at 811.069 kb on + strand at 811.083 kb on - strand at 811.170 kb on - strand at 811.171 kb on - strand at 811.184 kb on - strand at 811.196 kb on - strand at 811.218 kb on - strand at 811.225 kb on + strand at 811.243 kb on - strand at 811.265 kb on + strand at 811.350 kb on + strand, within Dsui_0804 at 811.362 kb on + strand, within Dsui_0804 at 811.379 kb on - strand, within Dsui_0804 at 811.526 kb on + strand, within Dsui_0804 at 811.589 kb on + strand, within Dsui_0804 at 811.600 kb on + strand, within Dsui_0804 at 811.625 kb on + strand, within Dsui_0804 at 811.731 kb on + strand at 811.746 kb on - strand, within Dsui_0804 at 811.815 kb on + strand, within Dsui_0804 at 811.847 kb on + strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.855 kb on - strand, within Dsui_0804 at 811.880 kb on + strand, within Dsui_0804 at 811.884 kb on + strand, within Dsui_0804 at 811.884 kb on + strand at 811.892 kb on - strand, within Dsui_0804 at 811.894 kb on - strand, within Dsui_0804 at 811.902 kb on - strand, within Dsui_0804 at 811.945 kb on + strand, within Dsui_0804 at 811.953 kb on - strand, within Dsui_0804 at 811.955 kb on + strand, within Dsui_0804 at 811.963 kb on - strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.970 kb on + strand, within Dsui_0804 at 811.978 kb on - strand, within Dsui_0804 at 812.012 kb on - strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.063 kb on + strand, within Dsui_0804 at 812.153 kb on + strand, within Dsui_0804 at 812.232 kb on - strand at 812.266 kb on + strand at 812.332 kb on - strand at 812.346 kb on + strand at 812.353 kb on - strand at 812.354 kb on - strand at 812.459 kb on - strand at 812.485 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 810,228 + Dsui_0803 0.58 +1.3 810,235 + Dsui_0803 0.59 +2.3 810,236 - Dsui_0803 0.59 +0.7 810,305 - Dsui_0803 0.62 -0.6 810,336 + Dsui_0803 0.63 -0.9 810,343 + Dsui_0803 0.63 +0.5 810,389 + Dsui_0803 0.65 -0.3 810,422 + Dsui_0803 0.67 +0.4 810,425 - -0.3 810,505 + Dsui_0803 0.71 -1.3 810,528 - Dsui_0803 0.72 -2.9 810,543 + Dsui_0803 0.72 -1.6 810,578 - Dsui_0803 0.74 +0.7 810,611 - Dsui_0803 0.75 -1.3 810,624 - Dsui_0803 0.76 -0.9 810,657 + Dsui_0803 0.77 -1.2 810,675 + Dsui_0803 0.78 +0.4 810,675 + Dsui_0803 0.78 +0.0 810,704 - Dsui_0803 0.79 -0.9 810,715 - Dsui_0803 0.80 +0.7 810,740 - Dsui_0803 0.81 +0.7 810,743 + Dsui_0803 0.81 -0.9 810,746 - Dsui_0803 0.81 -1.0 810,751 - Dsui_0803 0.81 -1.6 810,751 - Dsui_0803 0.81 -2.2 810,752 - Dsui_0803 0.81 -1.3 810,768 + Dsui_0803 0.82 -1.3 810,776 - Dsui_0803 0.83 +0.7 810,776 - Dsui_0803 0.83 -1.3 810,776 - Dsui_0803 0.83 -1.3 810,779 + Dsui_0803 0.83 -0.8 810,784 + Dsui_0803 0.83 -1.6 810,848 - Dsui_0803 0.86 +0.7 810,867 - Dsui_0803 0.87 -1.6 810,904 + Dsui_0803 0.88 -0.3 810,923 + Dsui_0803 0.89 -0.3 810,961 + -0.9 810,991 + -0.4 810,998 + -2.2 811,057 - -0.3 811,059 + -0.2 811,059 + -0.3 811,069 + +0.2 811,083 - -0.9 811,170 - -0.8 811,171 - -0.3 811,184 - +0.4 811,196 - +0.1 811,218 - -0.5 811,225 + -0.8 811,243 - +1.7 811,265 + -1.3 811,350 + Dsui_0804 0.15 +0.7 811,362 + Dsui_0804 0.16 -0.3 811,379 - Dsui_0804 0.18 -0.3 811,526 + Dsui_0804 0.31 +0.7 811,589 + Dsui_0804 0.36 +0.7 811,600 + Dsui_0804 0.37 -0.3 811,625 + Dsui_0804 0.39 -1.6 811,731 + +0.7 811,746 - Dsui_0804 0.50 -2.1 811,815 + Dsui_0804 0.56 -0.9 811,847 + Dsui_0804 0.59 -1.6 811,855 - Dsui_0804 0.60 +2.3 811,855 - Dsui_0804 0.60 -0.9 811,880 + Dsui_0804 0.62 +0.7 811,884 + Dsui_0804 0.62 -0.3 811,884 + +0.7 811,892 - Dsui_0804 0.63 -0.3 811,894 - Dsui_0804 0.63 -0.3 811,902 - Dsui_0804 0.64 +0.1 811,945 + Dsui_0804 0.68 +0.7 811,953 - Dsui_0804 0.68 +0.7 811,955 + Dsui_0804 0.68 +0.7 811,963 - Dsui_0804 0.69 +0.7 811,970 + Dsui_0804 0.70 -1.3 811,970 + Dsui_0804 0.70 -0.3 811,978 - Dsui_0804 0.70 +1.7 812,012 - Dsui_0804 0.73 +2.3 812,063 + Dsui_0804 0.78 -3.0 812,063 + Dsui_0804 0.78 -0.9 812,153 + Dsui_0804 0.86 -0.3 812,232 - +0.7 812,266 + +0.7 812,332 - -0.3 812,346 + -0.9 812,353 - +0.7 812,354 - -0.3 812,459 - -1.3 812,485 - -0.1
Or see this region's nucleotide sequence