Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0679 and Dsui_0680 are separated by 3 nucleotides Dsui_0680 and Dsui_0681 are separated by 29 nucleotides Dsui_0681 and Dsui_0682 are separated by 161 nucleotides Dsui_0682 and Dsui_0683 are separated by 161 nucleotides
Dsui_0679: Dsui_0679 - uncharacterized protein SCO1/SenC/PrrC, at 677,124 to 677,798
_0679
Dsui_0680: Dsui_0680 - short-chain dehydrogenase of unknown substrate specificity, at 677,802 to 678,533
_0680
Dsui_0681: Dsui_0681 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 678,563 to 679,372
_0681
Dsui_0682: Dsui_0682 - 5,10-methenyltetrahydrofolate synthetase, at 679,534 to 680,127
_0682
Dsui_0683: Dsui_0683 - soluble lytic murein transglycosylase-like protein, at 680,289 to 682,277
_0683
Position (kb) 678
679
680 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 677.610 kb on + strand, within Dsui_0679 at 677.623 kb on - strand, within Dsui_0679 at 677.839 kb on + strand at 677.877 kb on - strand, within Dsui_0680 at 677.894 kb on + strand, within Dsui_0680 at 677.927 kb on + strand, within Dsui_0680 at 677.930 kb on - strand, within Dsui_0680 at 678.075 kb on - strand, within Dsui_0680 at 678.216 kb on - strand, within Dsui_0680 at 678.392 kb on + strand, within Dsui_0680 at 678.445 kb on - strand, within Dsui_0680 at 678.477 kb on + strand at 678.541 kb on + strand at 678.732 kb on - strand at 678.766 kb on + strand, within Dsui_0681 at 678.859 kb on - strand, within Dsui_0681 at 678.885 kb on + strand, within Dsui_0681 at 678.892 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.210 kb on + strand, within Dsui_0681 at 679.236 kb on + strand, within Dsui_0681 at 679.236 kb on + strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.244 kb on - strand, within Dsui_0681 at 679.280 kb on - strand, within Dsui_0681 at 679.331 kb on + strand at 679.339 kb on - strand at 680.121 kb on - strand at 680.173 kb on + strand at 680.181 kb on - strand at 680.186 kb on - strand at 680.254 kb on + strand at 680.257 kb on - strand at 680.299 kb on + strand at 680.306 kb on - strand at 680.338 kb on + strand at 680.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 677,610 + Dsui_0679 0.72 -0.6 677,623 - Dsui_0679 0.74 -0.6 677,839 + +0.6 677,877 - Dsui_0680 0.10 -2.6 677,894 + Dsui_0680 0.13 -1.9 677,927 + Dsui_0680 0.17 -0.2 677,930 - Dsui_0680 0.17 +0.6 678,075 - Dsui_0680 0.37 -0.1 678,216 - Dsui_0680 0.57 +0.7 678,392 + Dsui_0680 0.81 -1.8 678,445 - Dsui_0680 0.88 -0.7 678,477 + -2.4 678,541 + -0.0 678,732 - -0.4 678,766 + Dsui_0681 0.25 +0.6 678,859 - Dsui_0681 0.37 -2.3 678,885 + Dsui_0681 0.40 +0.6 678,892 + Dsui_0681 0.41 -1.4 679,210 + Dsui_0681 0.80 -3.5 679,210 + Dsui_0681 0.80 -1.4 679,210 + Dsui_0681 0.80 -0.4 679,236 + Dsui_0681 0.83 -1.3 679,236 + Dsui_0681 0.83 -1.6 679,244 - Dsui_0681 0.84 -1.4 679,244 - Dsui_0681 0.84 +0.6 679,244 - Dsui_0681 0.84 -0.4 679,280 - Dsui_0681 0.89 -1.4 679,331 + -1.6 679,339 - -0.0 680,121 - -0.2 680,173 + -1.0 680,181 - -1.0 680,186 - -0.1 680,254 + -0.5 680,257 - -1.0 680,299 + -1.3 680,306 - -2.0 680,338 + -1.7 680,346 - -1.0
Or see this region's nucleotide sequence