Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0410 and Dsui_0411 are separated by 369 nucleotides Dsui_0411 and Dsui_0412 are separated by 47 nucleotides
Dsui_0410: Dsui_0410 - transcriptional regulator, at 410,630 to 411,265
_0410
Dsui_0411: Dsui_0411 - ABC-type dipeptide transport system, periplasmic component, at 411,635 to 413,245
_0411
Dsui_0412: Dsui_0412 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 413,293 to 414,246
_0412
Position (kb) 411
412
413
414 Strain fitness (log2 ratio) -2
-1
0
1 at 410.806 kb on + strand at 410.961 kb on - strand, within Dsui_0410 at 411.260 kb on + strand at 411.336 kb on - strand at 411.406 kb on - strand at 411.472 kb on - strand at 411.472 kb on - strand at 411.495 kb on + strand at 411.550 kb on - strand at 411.656 kb on - strand at 411.680 kb on + strand at 411.750 kb on + strand at 411.763 kb on - strand at 411.823 kb on - strand at 411.937 kb on + strand, within Dsui_0411 at 412.006 kb on + strand, within Dsui_0411 at 412.037 kb on + strand at 412.286 kb on - strand, within Dsui_0411 at 412.324 kb on + strand, within Dsui_0411 at 412.441 kb on + strand at 412.441 kb on + strand, within Dsui_0411 at 412.494 kb on - strand, within Dsui_0411 at 412.679 kb on - strand, within Dsui_0411 at 412.722 kb on + strand, within Dsui_0411 at 412.730 kb on - strand, within Dsui_0411 at 412.745 kb on - strand, within Dsui_0411 at 412.759 kb on + strand at 412.759 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.944 kb on - strand, within Dsui_0411 at 412.960 kb on - strand, within Dsui_0411 at 413.039 kb on - strand, within Dsui_0411 at 413.085 kb on - strand at 413.268 kb on - strand at 413.269 kb on - strand at 413.327 kb on - strand at 413.402 kb on - strand, within Dsui_0412 at 413.448 kb on - strand, within Dsui_0412 at 413.469 kb on + strand at 413.527 kb on - strand at 413.527 kb on - strand, within Dsui_0412 at 413.623 kb on + strand, within Dsui_0412 at 413.724 kb on + strand, within Dsui_0412 at 413.872 kb on + strand at 413.902 kb on - strand, within Dsui_0412 at 413.965 kb on - strand, within Dsui_0412 at 414.109 kb on - strand, within Dsui_0412 at 414.221 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 410,806 + +0.6 410,961 - Dsui_0410 0.52 +0.4 411,260 + +0.6 411,336 - +0.6 411,406 - -1.0 411,472 - -0.4 411,472 - +0.6 411,495 + +0.6 411,550 - -1.0 411,656 - +0.6 411,680 + -0.4 411,750 + +0.6 411,763 - +0.6 411,823 - +0.6 411,937 + Dsui_0411 0.19 -1.0 412,006 + Dsui_0411 0.23 +0.6 412,037 + +0.6 412,286 - Dsui_0411 0.40 +0.6 412,324 + Dsui_0411 0.43 -2.4 412,441 + -0.4 412,441 + Dsui_0411 0.50 -1.0 412,494 - Dsui_0411 0.53 +0.6 412,679 - Dsui_0411 0.65 -1.4 412,722 + Dsui_0411 0.67 -1.0 412,730 - Dsui_0411 0.68 +0.6 412,745 - Dsui_0411 0.69 -0.4 412,759 + +0.6 412,759 + Dsui_0411 0.70 +0.6 412,839 + Dsui_0411 0.75 -1.7 412,839 + Dsui_0411 0.75 -1.4 412,944 - Dsui_0411 0.81 +0.6 412,960 - Dsui_0411 0.82 -0.4 413,039 - Dsui_0411 0.87 +0.6 413,085 - +0.6 413,268 - -0.4 413,269 - -2.0 413,327 - -1.4 413,402 - Dsui_0412 0.11 -2.4 413,448 - Dsui_0412 0.16 -1.4 413,469 + +0.6 413,527 - +0.6 413,527 - Dsui_0412 0.25 -1.0 413,623 + Dsui_0412 0.35 +0.6 413,724 + Dsui_0412 0.45 +0.6 413,872 + +0.6 413,902 - Dsui_0412 0.64 -1.4 413,965 - Dsui_0412 0.70 +0.6 414,109 - Dsui_0412 0.86 -1.4 414,221 - -0.4
Or see this region's nucleotide sequence