Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0259 and Dsui_0260 overlap by 4 nucleotides Dsui_0260 and Dsui_0261 are separated by 74 nucleotides Dsui_0261 and Dsui_0262 are separated by 133 nucleotides
Dsui_0259: Dsui_0259 - sulfate ABC transporter, permease protein CysW, at 256,948 to 257,814
_0259
Dsui_0260: Dsui_0260 - sulfate ABC transporter, permease protein CysT, at 257,811 to 258,659
_0260
Dsui_0261: Dsui_0261 - sulfate/thiosulfate-binding protein, at 258,734 to 259,747
_0261
Dsui_0262: Dsui_0262 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 259,881 to 262,799
_0262
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1 at 257.768 kb on + strand at 257.774 kb on - strand at 257.835 kb on - strand at 257.911 kb on + strand, within Dsui_0260 at 257.946 kb on - strand, within Dsui_0260 at 257.946 kb on - strand, within Dsui_0260 at 258.056 kb on + strand, within Dsui_0260 at 258.069 kb on + strand, within Dsui_0260 at 258.190 kb on - strand, within Dsui_0260 at 258.190 kb on - strand, within Dsui_0260 at 258.245 kb on - strand, within Dsui_0260 at 258.245 kb on - strand, within Dsui_0260 at 258.257 kb on + strand, within Dsui_0260 at 258.263 kb on + strand, within Dsui_0260 at 258.328 kb on - strand, within Dsui_0260 at 258.357 kb on - strand, within Dsui_0260 at 258.604 kb on + strand at 258.685 kb on - strand at 258.744 kb on + strand at 258.757 kb on - strand at 258.786 kb on - strand at 258.830 kb on + strand at 258.831 kb on + strand at 258.839 kb on - strand, within Dsui_0261 at 258.947 kb on + strand, within Dsui_0261 at 258.948 kb on + strand, within Dsui_0261 at 258.956 kb on - strand, within Dsui_0261 at 258.956 kb on - strand, within Dsui_0261 at 259.027 kb on + strand, within Dsui_0261 at 259.035 kb on - strand, within Dsui_0261 at 259.058 kb on + strand, within Dsui_0261 at 259.239 kb on - strand, within Dsui_0261 at 259.258 kb on + strand, within Dsui_0261 at 259.266 kb on - strand, within Dsui_0261 at 259.340 kb on - strand, within Dsui_0261 at 259.347 kb on + strand, within Dsui_0261 at 259.376 kb on + strand, within Dsui_0261 at 259.422 kb on + strand, within Dsui_0261 at 259.422 kb on + strand, within Dsui_0261 at 259.435 kb on - strand, within Dsui_0261 at 259.512 kb on + strand at 259.536 kb on - strand, within Dsui_0261 at 259.575 kb on + strand, within Dsui_0261 at 259.583 kb on - strand, within Dsui_0261 at 259.655 kb on - strand at 259.665 kb on - strand at 259.685 kb on - strand at 259.725 kb on - strand at 259.742 kb on + strand at 259.795 kb on - strand at 259.918 kb on + strand at 259.926 kb on - strand at 259.926 kb on - strand at 259.976 kb on - strand at 260.003 kb on - strand at 260.048 kb on + strand at 260.084 kb on + strand at 260.137 kb on + strand at 260.244 kb on - strand, within Dsui_0262 at 260.317 kb on + strand, within Dsui_0262 at 260.423 kb on - strand, within Dsui_0262 at 260.570 kb on - strand, within Dsui_0262 at 260.672 kb on + strand, within Dsui_0262 at 260.730 kb on + strand, within Dsui_0262
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 257,768 + -0.3 257,774 - -0.9 257,835 - -0.6 257,911 + Dsui_0260 0.12 +0.7 257,946 - Dsui_0260 0.16 -1.7 257,946 - Dsui_0260 0.16 -1.0 258,056 + Dsui_0260 0.29 -0.9 258,069 + Dsui_0260 0.30 -0.9 258,190 - Dsui_0260 0.45 -1.0 258,190 - Dsui_0260 0.45 -1.4 258,245 - Dsui_0260 0.51 -1.7 258,245 - Dsui_0260 0.51 -1.4 258,257 + Dsui_0260 0.53 +0.7 258,263 + Dsui_0260 0.53 +0.7 258,328 - Dsui_0260 0.61 -1.2 258,357 - Dsui_0260 0.64 -1.2 258,604 + +0.7 258,685 - +0.6 258,744 + -1.3 258,757 - -0.1 258,786 - -0.7 258,830 + -0.3 258,831 + -0.9 258,839 - Dsui_0261 0.10 -0.0 258,947 + Dsui_0261 0.21 -1.9 258,948 + Dsui_0261 0.21 -0.3 258,956 - Dsui_0261 0.22 +0.0 258,956 - Dsui_0261 0.22 -0.2 259,027 + Dsui_0261 0.29 -0.3 259,035 - Dsui_0261 0.30 -0.2 259,058 + Dsui_0261 0.32 -0.3 259,239 - Dsui_0261 0.50 -0.3 259,258 + Dsui_0261 0.52 -0.3 259,266 - Dsui_0261 0.52 -0.2 259,340 - Dsui_0261 0.60 -0.3 259,347 + Dsui_0261 0.60 -0.3 259,376 + Dsui_0261 0.63 +0.7 259,422 + Dsui_0261 0.68 -0.4 259,422 + Dsui_0261 0.68 -1.2 259,435 - Dsui_0261 0.69 -0.8 259,512 + +0.7 259,536 - Dsui_0261 0.79 -0.4 259,575 + Dsui_0261 0.83 +0.7 259,583 - Dsui_0261 0.84 -0.6 259,655 - -0.7 259,665 - -0.8 259,685 - -0.9 259,725 - -1.1 259,742 + +0.7 259,795 - -0.3 259,918 + -0.3 259,926 - +0.9 259,926 - +0.0 259,976 - -0.4 260,003 - -2.5 260,048 + -1.6 260,084 + -0.3 260,137 + -0.3 260,244 - Dsui_0262 0.12 -0.5 260,317 + Dsui_0262 0.15 +0.7 260,423 - Dsui_0262 0.19 -0.5 260,570 - Dsui_0262 0.24 +0.2 260,672 + Dsui_0262 0.27 -1.6 260,730 + Dsui_0262 0.29 -0.3
Or see this region's nucleotide sequence