Experiment: ALP with Thallium(I) acetate 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0084 and Dsui_0085 are separated by 303 nucleotides Dsui_0085 and Dsui_0086 are separated by 14 nucleotides Dsui_0086 and Dsui_0087 overlap by 4 nucleotides
Dsui_0084: Dsui_0084 - ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain, at 81,265 to 83,040
_0084
Dsui_0085: Dsui_0085 - GDP-mannose 4,6-dehydratase, at 83,344 to 84,435
_0085
Dsui_0086: Dsui_0086 - nucleoside-diphosphate-sugar epimerase, at 84,450 to 85,421
_0086
Dsui_0087: Dsui_0087 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 85,418 to 86,854
_0087
Position (kb)
83
84
85 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 82.352 kb on + strand, within Dsui_0084 at 82.387 kb on - strand, within Dsui_0084 at 82.484 kb on + strand, within Dsui_0084 at 82.493 kb on - strand, within Dsui_0084 at 82.494 kb on + strand, within Dsui_0084 at 82.499 kb on + strand, within Dsui_0084 at 82.502 kb on - strand, within Dsui_0084 at 82.533 kb on + strand, within Dsui_0084 at 82.541 kb on - strand, within Dsui_0084 at 82.605 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.654 kb on - strand, within Dsui_0084 at 82.689 kb on + strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.697 kb on - strand, within Dsui_0084 at 82.748 kb on - strand, within Dsui_0084 at 82.782 kb on + strand, within Dsui_0084 at 82.787 kb on - strand, within Dsui_0084 at 82.789 kb on + strand, within Dsui_0084 at 82.812 kb on + strand, within Dsui_0084 at 82.816 kb on - strand, within Dsui_0084 at 82.840 kb on - strand, within Dsui_0084 at 82.910 kb on + strand at 82.927 kb on - strand at 82.937 kb on - strand at 82.937 kb on - strand at 82.945 kb on - strand at 82.968 kb on - strand at 83.002 kb on - strand at 83.008 kb on + strand at 83.034 kb on + strand at 83.116 kb on - strand at 83.133 kb on - strand at 83.150 kb on - strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.168 kb on + strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.176 kb on - strand at 83.202 kb on - strand at 83.263 kb on + strand at 83.290 kb on + strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.298 kb on - strand at 83.303 kb on - strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.371 kb on - strand at 83.371 kb on - strand at 83.405 kb on + strand at 83.407 kb on + strand at 83.407 kb on + strand at 83.413 kb on - strand at 83.413 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.415 kb on - strand at 83.426 kb on + strand at 83.535 kb on - strand, within Dsui_0085 at 83.577 kb on - strand, within Dsui_0085 at 83.607 kb on - strand, within Dsui_0085 at 83.630 kb on - strand, within Dsui_0085 at 83.654 kb on + strand, within Dsui_0085 at 83.655 kb on - strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.659 kb on + strand, within Dsui_0085 at 83.665 kb on - strand, within Dsui_0085 at 83.667 kb on - strand, within Dsui_0085 at 83.747 kb on + strand, within Dsui_0085 at 83.762 kb on + strand, within Dsui_0085 at 83.773 kb on + strand, within Dsui_0085 at 83.795 kb on + strand, within Dsui_0085 at 83.796 kb on - strand, within Dsui_0085 at 83.802 kb on + strand, within Dsui_0085 at 83.804 kb on - strand, within Dsui_0085 at 83.864 kb on - strand, within Dsui_0085 at 83.885 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.893 kb on + strand, within Dsui_0085 at 83.894 kb on - strand, within Dsui_0085 at 83.895 kb on + strand, within Dsui_0085 at 83.901 kb on - strand, within Dsui_0085 at 83.916 kb on - strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.939 kb on + strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.947 kb on - strand, within Dsui_0085 at 83.958 kb on + strand at 83.958 kb on + strand, within Dsui_0085 at 83.964 kb on - strand, within Dsui_0085 at 83.966 kb on - strand, within Dsui_0085 at 84.009 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand, within Dsui_0085 at 84.024 kb on + strand at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.032 kb on - strand, within Dsui_0085 at 84.084 kb on + strand, within Dsui_0085 at 84.102 kb on + strand, within Dsui_0085 at 84.108 kb on - strand, within Dsui_0085 at 84.110 kb on - strand, within Dsui_0085 at 84.124 kb on + strand, within Dsui_0085 at 84.145 kb on + strand, within Dsui_0085 at 84.160 kb on + strand, within Dsui_0085 at 84.160 kb on + strand, within Dsui_0085 at 84.168 kb on - strand, within Dsui_0085 at 84.168 kb on - strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.219 kb on + strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.227 kb on - strand, within Dsui_0085 at 84.292 kb on - strand, within Dsui_0085 at 84.293 kb on - strand, within Dsui_0085 at 84.308 kb on + strand, within Dsui_0085 at 84.345 kb on + strand at 84.347 kb on + strand at 84.347 kb on + strand at 84.354 kb on - strand at 84.355 kb on - strand at 84.378 kb on + strand at 84.382 kb on + strand at 84.404 kb on + strand at 84.412 kb on - strand at 84.425 kb on + strand at 84.439 kb on + strand at 84.439 kb on + strand at 84.447 kb on - strand at 84.447 kb on - strand at 84.483 kb on + strand at 84.483 kb on + strand at 84.491 kb on - strand at 84.491 kb on - strand at 84.491 kb on - strand at 84.501 kb on + strand at 84.545 kb on + strand at 84.545 kb on + strand at 84.581 kb on - strand, within Dsui_0086 at 84.690 kb on + strand, within Dsui_0086 at 84.765 kb on - strand, within Dsui_0086 at 84.773 kb on + strand, within Dsui_0086 at 84.804 kb on + strand, within Dsui_0086 at 84.804 kb on + strand, within Dsui_0086 at 84.843 kb on - strand, within Dsui_0086 at 84.858 kb on + strand, within Dsui_0086 at 84.858 kb on + strand, within Dsui_0086 at 84.907 kb on + strand, within Dsui_0086 at 84.959 kb on - strand, within Dsui_0086 at 84.977 kb on + strand, within Dsui_0086 at 84.985 kb on - strand, within Dsui_0086 at 84.985 kb on - strand, within Dsui_0086 at 85.022 kb on + strand, within Dsui_0086 at 85.022 kb on + strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.030 kb on - strand, within Dsui_0086 at 85.040 kb on + strand at 85.048 kb on - strand, within Dsui_0086 at 85.073 kb on + strand, within Dsui_0086 at 85.073 kb on + strand, within Dsui_0086 at 85.164 kb on - strand, within Dsui_0086 at 85.187 kb on + strand, within Dsui_0086 at 85.218 kb on - strand, within Dsui_0086 at 85.231 kb on + strand, within Dsui_0086 at 85.326 kb on - strand at 85.422 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Thallium(I) acetate 0.003 mg/ml remove 82,352 + Dsui_0084 0.61 -0.1 82,387 - Dsui_0084 0.63 -5.6 82,484 + Dsui_0084 0.69 -0.1 82,493 - Dsui_0084 0.69 -5.0 82,494 + Dsui_0084 0.69 +0.9 82,499 + Dsui_0084 0.69 -1.5 82,502 - Dsui_0084 0.70 -6.0 82,533 + Dsui_0084 0.71 -0.1 82,541 - Dsui_0084 0.72 -6.1 82,605 - Dsui_0084 0.75 -6.2 82,654 - Dsui_0084 0.78 -6.4 82,654 - Dsui_0084 0.78 -4.8 82,654 - Dsui_0084 0.78 -1.1 82,689 + Dsui_0084 0.80 -0.7 82,697 - Dsui_0084 0.81 -5.6 82,697 - Dsui_0084 0.81 -6.7 82,748 - Dsui_0084 0.84 -5.5 82,782 + Dsui_0084 0.85 +0.9 82,787 - Dsui_0084 0.86 -3.8 82,789 + Dsui_0084 0.86 -1.9 82,812 + Dsui_0084 0.87 -2.1 82,816 - Dsui_0084 0.87 -5.3 82,840 - Dsui_0084 0.89 -5.6 82,910 + -0.1 82,927 - -6.5 82,937 - -6.2 82,937 - -5.7 82,945 - -5.7 82,968 - -5.2 83,002 - -6.1 83,008 + -2.1 83,034 + -0.7 83,116 - +0.2 83,133 - +0.0 83,150 - -0.1 83,168 + -0.7 83,168 + -0.1 83,168 + -1.5 83,168 + -1.1 83,168 + +0.9 83,168 + -0.1 83,168 + -0.1 83,168 + -0.1 83,168 + +0.9 83,176 - +0.0 83,176 - +0.0 83,176 - -0.2 83,176 - -0.2 83,176 - -0.0 83,176 - +0.1 83,176 - -0.1 83,176 - -0.1 83,202 - +0.2 83,263 + +0.9 83,290 + -0.1 83,298 - +0.0 83,298 - +0.0 83,298 - -0.0 83,298 - +0.1 83,303 - +0.1 83,356 + -0.1 83,356 + -0.1 83,371 - -0.1 83,371 - +0.1 83,405 + +0.9 83,407 + -0.7 83,407 + -0.7 83,413 - -1.1 83,413 - -1.0 83,415 - -2.5 83,415 - -2.9 83,415 - -2.7 83,426 + -1.5 83,535 - Dsui_0085 0.17 -4.7 83,577 - Dsui_0085 0.21 -3.9 83,607 - Dsui_0085 0.24 -4.1 83,630 - Dsui_0085 0.26 -3.8 83,654 + Dsui_0085 0.28 +0.9 83,655 - Dsui_0085 0.28 -3.0 83,659 + Dsui_0085 0.29 +0.9 83,659 + Dsui_0085 0.29 -0.1 83,665 - Dsui_0085 0.29 -5.4 83,667 - Dsui_0085 0.30 -5.7 83,747 + Dsui_0085 0.37 -0.7 83,762 + Dsui_0085 0.38 +0.9 83,773 + Dsui_0085 0.39 +0.9 83,795 + Dsui_0085 0.41 +0.9 83,796 - Dsui_0085 0.41 -5.5 83,802 + Dsui_0085 0.42 -0.1 83,804 - Dsui_0085 0.42 -5.9 83,864 - Dsui_0085 0.48 -5.4 83,885 + Dsui_0085 0.50 -1.1 83,893 + Dsui_0085 0.50 -0.7 83,893 + Dsui_0085 0.50 +0.9 83,894 - Dsui_0085 0.50 -4.6 83,895 + Dsui_0085 0.50 -0.1 83,901 - Dsui_0085 0.51 -5.0 83,916 - Dsui_0085 0.52 -5.6 83,939 + Dsui_0085 0.54 +0.9 83,939 + Dsui_0085 0.54 +0.9 83,947 - Dsui_0085 0.55 -5.4 83,947 - Dsui_0085 0.55 -4.7 83,947 - Dsui_0085 0.55 -5.9 83,947 - Dsui_0085 0.55 -4.7 83,947 - Dsui_0085 0.55 -5.4 83,947 - Dsui_0085 0.55 -3.4 83,958 + +0.9 83,958 + Dsui_0085 0.56 -0.1 83,964 - Dsui_0085 0.57 -5.7 83,966 - Dsui_0085 0.57 -6.0 84,009 + Dsui_0085 0.61 +0.9 84,024 + Dsui_0085 0.62 -0.7 84,024 + Dsui_0085 0.62 +0.9 84,024 + +0.9 84,032 - Dsui_0085 0.63 -4.7 84,032 - Dsui_0085 0.63 -4.9 84,032 - Dsui_0085 0.63 -3.8 84,032 - Dsui_0085 0.63 -4.8 84,032 - Dsui_0085 0.63 -5.0 84,084 + Dsui_0085 0.68 +0.9 84,102 + Dsui_0085 0.69 +0.9 84,108 - Dsui_0085 0.70 -4.7 84,110 - Dsui_0085 0.70 -5.7 84,124 + Dsui_0085 0.71 -2.3 84,145 + Dsui_0085 0.73 +0.9 84,160 + Dsui_0085 0.75 +0.9 84,160 + Dsui_0085 0.75 -1.1 84,168 - Dsui_0085 0.75 -5.9 84,168 - Dsui_0085 0.75 -5.5 84,219 + Dsui_0085 0.80 -1.1 84,219 + Dsui_0085 0.80 +0.9 84,219 + Dsui_0085 0.80 -0.1 84,219 + Dsui_0085 0.80 +0.9 84,219 + Dsui_0085 0.80 +0.9 84,219 + Dsui_0085 0.80 +0.9 84,219 + Dsui_0085 0.80 -1.1 84,219 + Dsui_0085 0.80 +0.9 84,227 - Dsui_0085 0.81 -2.5 84,227 - Dsui_0085 0.81 -5.1 84,227 - Dsui_0085 0.81 -2.8 84,227 - Dsui_0085 0.81 -5.8 84,227 - Dsui_0085 0.81 -5.2 84,227 - Dsui_0085 0.81 -4.9 84,292 - Dsui_0085 0.87 -4.7 84,293 - Dsui_0085 0.87 -5.9 84,308 + Dsui_0085 0.88 -1.1 84,345 + -0.7 84,347 + +0.9 84,347 + +0.9 84,354 - -5.0 84,355 - -3.6 84,378 + -0.1 84,382 + +0.9 84,404 + +0.9 84,412 - -5.4 84,425 + +0.9 84,439 + +0.9 84,439 + -0.1 84,447 - -0.4 84,447 - -0.5 84,483 + -1.1 84,483 + +0.9 84,491 - -6.3 84,491 - -5.6 84,491 - -5.4 84,501 + +0.9 84,545 + -0.1 84,545 + +0.9 84,581 - Dsui_0086 0.13 -4.8 84,690 + Dsui_0086 0.25 +0.9 84,765 - Dsui_0086 0.32 -6.5 84,773 + Dsui_0086 0.33 -1.1 84,804 + Dsui_0086 0.36 +0.9 84,804 + Dsui_0086 0.36 -0.1 84,843 - Dsui_0086 0.40 -5.4 84,858 + Dsui_0086 0.42 +0.9 84,858 + Dsui_0086 0.42 -0.7 84,907 + Dsui_0086 0.47 +0.9 84,959 - Dsui_0086 0.52 -5.5 84,977 + Dsui_0086 0.54 -0.7 84,985 - Dsui_0086 0.55 -5.3 84,985 - Dsui_0086 0.55 -4.8 85,022 + Dsui_0086 0.59 -0.7 85,022 + Dsui_0086 0.59 -0.1 85,030 - Dsui_0086 0.60 -3.2 85,030 - Dsui_0086 0.60 -5.2 85,030 - Dsui_0086 0.60 -3.1 85,030 - Dsui_0086 0.60 -3.5 85,030 - Dsui_0086 0.60 -6.1 85,030 - Dsui_0086 0.60 -5.9 85,040 + +0.9 85,048 - Dsui_0086 0.62 -7.2 85,073 + Dsui_0086 0.64 -1.7 85,073 + Dsui_0086 0.64 -0.1 85,164 - Dsui_0086 0.73 -6.1 85,187 + Dsui_0086 0.76 +0.9 85,218 - Dsui_0086 0.79 -4.8 85,231 + Dsui_0086 0.80 +0.9 85,326 - -5.3 85,422 - +0.1
Or see this region's nucleotide sequence