Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20035 and BWI76_RS20040 are separated by 15 nucleotides BWI76_RS20040 and BWI76_RS20045 are separated by 11 nucleotides BWI76_RS20045 and BWI76_RS20050 are separated by 105 nucleotides BWI76_RS20050 and BWI76_RS20055 overlap by 24 nucleotides
BWI76_RS20035: BWI76_RS20035 - hypothetical protein, at 4,197,551 to 4,198,531
_RS20035
BWI76_RS20040: BWI76_RS20040 - tricarboxylic transport membrane protein, at 4,198,547 to 4,198,978
_RS20040
BWI76_RS20045: BWI76_RS20045 - hypothetical protein, at 4,198,990 to 4,200,510
_RS20045
BWI76_RS20050: BWI76_RS20050 - hypothetical protein, at 4,200,616 to 4,201,239
_RS20050
BWI76_RS20055: BWI76_RS20055 - 2-succinylbenzoate-CoA ligase, at 4,201,216 to 4,202,607
_RS20055
Position (kb) 4198
4199
4200
4201 Strain fitness (log2 ratio) -1
0
1 at 4198.263 kb on + strand, within BWI76_RS20035 at 4198.393 kb on + strand, within BWI76_RS20035 at 4198.677 kb on + strand, within BWI76_RS20040 at 4198.697 kb on + strand, within BWI76_RS20040 at 4198.737 kb on - strand, within BWI76_RS20040 at 4198.909 kb on - strand, within BWI76_RS20040 at 4199.204 kb on - strand, within BWI76_RS20045 at 4199.237 kb on + strand, within BWI76_RS20045 at 4199.343 kb on - strand, within BWI76_RS20045 at 4199.825 kb on + strand, within BWI76_RS20045 at 4200.145 kb on - strand, within BWI76_RS20045 at 4200.169 kb on - strand, within BWI76_RS20045 at 4200.844 kb on + strand, within BWI76_RS20050
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,198,263 + BWI76_RS20035 0.73 +0.7 4,198,393 + BWI76_RS20035 0.86 -1.2 4,198,677 + BWI76_RS20040 0.30 -0.5 4,198,697 + BWI76_RS20040 0.35 -0.9 4,198,737 - BWI76_RS20040 0.44 +0.7 4,198,909 - BWI76_RS20040 0.84 +0.2 4,199,204 - BWI76_RS20045 0.14 +1.2 4,199,237 + BWI76_RS20045 0.16 +0.6 4,199,343 - BWI76_RS20045 0.23 -0.3 4,199,825 + BWI76_RS20045 0.55 +0.2 4,200,145 - BWI76_RS20045 0.76 +1.3 4,200,169 - BWI76_RS20045 0.78 +0.7 4,200,844 + BWI76_RS20050 0.37 -0.8
Or see this region's nucleotide sequence