Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19705 and AZOBR_RS19710 are separated by 162 nucleotides
AZOBR_RS19705: AZOBR_RS19705 - permease, at 1,191,283 to 1,193,064
_RS19705
AZOBR_RS19710: AZOBR_RS19710 - 2 5-didehydrogluconate reductase, at 1,193,227 to 1,194,051
_RS19710
Position (kb)
1193
1194
1195 Strain fitness (log2 ratio)
-2
-1
0
1 at 1192.975 kb on + strand at 1193.063 kb on - strand at 1193.063 kb on - strand at 1193.158 kb on - strand at 1193.158 kb on - strand at 1193.501 kb on + strand, within AZOBR_RS19710 at 1193.501 kb on + strand, within AZOBR_RS19710 at 1193.501 kb on + strand, within AZOBR_RS19710 at 1193.504 kb on + strand, within AZOBR_RS19710 at 1193.505 kb on - strand, within AZOBR_RS19710 at 1193.505 kb on - strand, within AZOBR_RS19710 at 1193.505 kb on - strand, within AZOBR_RS19710 at 1193.564 kb on + strand, within AZOBR_RS19710 at 1193.573 kb on + strand, within AZOBR_RS19710 at 1193.760 kb on - strand, within AZOBR_RS19710 at 1193.760 kb on - strand, within AZOBR_RS19710 at 1193.819 kb on + strand, within AZOBR_RS19710 at 1193.819 kb on + strand, within AZOBR_RS19710 at 1193.819 kb on + strand, within AZOBR_RS19710 at 1193.820 kb on - strand, within AZOBR_RS19710 at 1193.820 kb on - strand, within AZOBR_RS19710 at 1193.912 kb on + strand, within AZOBR_RS19710 at 1193.912 kb on + strand, within AZOBR_RS19710 at 1193.912 kb on + strand, within AZOBR_RS19710 at 1193.913 kb on - strand, within AZOBR_RS19710 at 1194.091 kb on - strand at 1194.091 kb on - strand at 1194.091 kb on - strand at 1194.091 kb on - strand at 1194.640 kb on - strand at 1195.033 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 1,192,975 + -0.6 1,193,063 - -0.9 1,193,063 - +0.3 1,193,158 - -0.5 1,193,158 - +0.1 1,193,501 + AZOBR_RS19710 0.33 +0.4 1,193,501 + AZOBR_RS19710 0.33 +0.4 1,193,501 + AZOBR_RS19710 0.33 +0.2 1,193,504 + AZOBR_RS19710 0.34 -0.0 1,193,505 - AZOBR_RS19710 0.34 +0.4 1,193,505 - AZOBR_RS19710 0.34 +0.7 1,193,505 - AZOBR_RS19710 0.34 +0.1 1,193,564 + AZOBR_RS19710 0.41 +1.1 1,193,573 + AZOBR_RS19710 0.42 +0.4 1,193,760 - AZOBR_RS19710 0.65 +0.3 1,193,760 - AZOBR_RS19710 0.65 +0.1 1,193,819 + AZOBR_RS19710 0.72 +0.8 1,193,819 + AZOBR_RS19710 0.72 -0.0 1,193,819 + AZOBR_RS19710 0.72 -2.4 1,193,820 - AZOBR_RS19710 0.72 +0.2 1,193,820 - AZOBR_RS19710 0.72 +0.2 1,193,912 + AZOBR_RS19710 0.83 +0.5 1,193,912 + AZOBR_RS19710 0.83 -0.6 1,193,912 + AZOBR_RS19710 0.83 -0.2 1,193,913 - AZOBR_RS19710 0.83 -0.1 1,194,091 - +0.1 1,194,091 - +0.7 1,194,091 - +0.8 1,194,091 - +0.4 1,194,640 - -1.4 1,195,033 - +0.9
Or see this region's nucleotide sequence