Experiment: D-Glucose (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS11880 and AZOBR_RS11885 are separated by 169 nucleotides AZOBR_RS11885 and AZOBR_RS11890 are separated by 81 nucleotides
AZOBR_RS11880: AZOBR_RS11880 - 1-aminocyclopropane-1-carboxylate deaminase, at 2,498,618 to 2,499,772
_RS11880
AZOBR_RS11885: AZOBR_RS11885 - glutamate--cysteine ligase, at 2,499,942 to 2,501,306
_RS11885
AZOBR_RS11890: AZOBR_RS11890 - 16S rRNA methyltransferase, at 2,501,388 to 2,502,182
_RS11890
Position (kb)
2499
2500
2501
2502 Strain fitness (log2 ratio)
-1
0
1
2 at 2498.997 kb on - strand, within AZOBR_RS11880 at 2499.236 kb on + strand, within AZOBR_RS11880 at 2499.236 kb on + strand, within AZOBR_RS11880 at 2499.237 kb on - strand, within AZOBR_RS11880 at 2499.321 kb on - strand, within AZOBR_RS11880 at 2499.321 kb on - strand, within AZOBR_RS11880 at 2499.572 kb on + strand, within AZOBR_RS11880 at 2499.572 kb on + strand, within AZOBR_RS11880 at 2499.572 kb on + strand, within AZOBR_RS11880 at 2499.572 kb on + strand, within AZOBR_RS11880 at 2499.572 kb on + strand, within AZOBR_RS11880 at 2499.573 kb on - strand, within AZOBR_RS11880 at 2499.573 kb on - strand, within AZOBR_RS11880 at 2499.573 kb on - strand, within AZOBR_RS11880 at 2499.579 kb on - strand, within AZOBR_RS11880 at 2499.771 kb on - strand at 2499.771 kb on - strand at 2499.947 kb on - strand at 2499.947 kb on - strand at 2499.952 kb on + strand at 2501.661 kb on + strand, within AZOBR_RS11890 at 2501.661 kb on + strand, within AZOBR_RS11890 at 2501.662 kb on - strand, within AZOBR_RS11890 at 2501.662 kb on - strand, within AZOBR_RS11890 at 2501.662 kb on - strand, within AZOBR_RS11890 at 2501.686 kb on + strand, within AZOBR_RS11890 at 2501.693 kb on + strand, within AZOBR_RS11890 at 2501.693 kb on + strand, within AZOBR_RS11890 at 2501.693 kb on + strand, within AZOBR_RS11890 at 2501.693 kb on + strand, within AZOBR_RS11890 at 2501.694 kb on - strand, within AZOBR_RS11890 at 2501.694 kb on - strand, within AZOBR_RS11890 at 2502.154 kb on + strand at 2502.154 kb on + strand at 2502.154 kb on + strand at 2502.154 kb on + strand at 2502.154 kb on + strand at 2502.214 kb on - strand at 2502.214 kb on - strand at 2502.215 kb on + strand at 2502.216 kb on - strand at 2502.216 kb on - strand at 2502.216 kb on - strand at 2502.221 kb on + strand at 2502.273 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) with ammonium chloride; anaerobic; 8 days remove 2,498,997 - AZOBR_RS11880 0.33 -1.0 2,499,236 + AZOBR_RS11880 0.54 -0.7 2,499,236 + AZOBR_RS11880 0.54 -0.8 2,499,237 - AZOBR_RS11880 0.54 +1.0 2,499,321 - AZOBR_RS11880 0.61 -0.1 2,499,321 - AZOBR_RS11880 0.61 -0.4 2,499,572 + AZOBR_RS11880 0.83 +1.1 2,499,572 + AZOBR_RS11880 0.83 +0.8 2,499,572 + AZOBR_RS11880 0.83 +0.0 2,499,572 + AZOBR_RS11880 0.83 +0.9 2,499,572 + AZOBR_RS11880 0.83 +0.2 2,499,573 - AZOBR_RS11880 0.83 -0.7 2,499,573 - AZOBR_RS11880 0.83 +0.7 2,499,573 - AZOBR_RS11880 0.83 -0.9 2,499,579 - AZOBR_RS11880 0.83 -0.2 2,499,771 - +0.1 2,499,771 - +0.1 2,499,947 - +0.3 2,499,947 - +0.7 2,499,952 + +0.4 2,501,661 + AZOBR_RS11890 0.34 +0.1 2,501,661 + AZOBR_RS11890 0.34 +0.2 2,501,662 - AZOBR_RS11890 0.34 +0.9 2,501,662 - AZOBR_RS11890 0.34 -0.0 2,501,662 - AZOBR_RS11890 0.34 -0.1 2,501,686 + AZOBR_RS11890 0.37 +2.0 2,501,693 + AZOBR_RS11890 0.38 +0.5 2,501,693 + AZOBR_RS11890 0.38 +1.5 2,501,693 + AZOBR_RS11890 0.38 -0.5 2,501,693 + AZOBR_RS11890 0.38 +1.3 2,501,694 - AZOBR_RS11890 0.38 +0.9 2,501,694 - AZOBR_RS11890 0.38 +0.5 2,502,154 + +0.5 2,502,154 + +1.2 2,502,154 + +1.8 2,502,154 + +0.8 2,502,154 + +0.1 2,502,214 - -0.1 2,502,214 - -0.2 2,502,215 + -0.9 2,502,216 - +0.2 2,502,216 - +0.3 2,502,216 - +0.2 2,502,221 + +0.3 2,502,273 + +0.6
Or see this region's nucleotide sequence