Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19690

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
4,316,746	+		AO353_19680	0.89	+0.8
4,316,747	-		AO353_19680	0.89	-0.9
4,316,900	-				+0.6
4,316,908	-				-0.9
4,316,996	+				-0.7
4,316,996	+				-0.9
4,316,996	+				+0.4
4,316,996	+				+0.9
4,316,996	+				-1.4
4,316,996	+				+0.6
4,316,996	+				+0.8
4,316,997	-				-0.6
4,316,997	-				+0.9
4,316,997	-				+0.1
4,316,997	-				-0.3
4,316,997	-				-0.2
4,316,999	+				+0.4
4,316,999	+				-0.1
4,316,999	+				-0.7
4,316,999	+				-1.8
4,317,000	-				-0.0
4,317,000	-				-0.4
4,317,000	-				-0.4
4,317,103	-				+1.3
4,317,126	+				+0.0
4,317,127	-				-1.2
4,317,130	+				-1.2
4,317,130	+				-0.2
4,317,130	+				-0.4
4,317,130	+				+0.6
4,317,131	-				+0.9
4,317,131	-				+0.4
4,317,131	-				+1.5
4,317,131	-				-0.8
4,317,131	-				+0.1
4,317,131	-				+0.5
4,317,131	-				-0.6
4,317,156	+				-0.9
4,317,156	+				+0.6
4,317,156	+				-0.9
4,317,157	-				+1.5
4,317,157	-				+0.6
4,317,159	-				+1.2
4,317,176	+				-1.4
4,317,176	+				-1.4
4,317,176	+				+0.2
4,317,176	+				+1.3
4,317,396	+		AO353_19685	0.47	+1.0
4,317,396	+		AO353_19685	0.47	-0.2
4,317,396	+		AO353_19685	0.47	+0.2
4,317,397	-		AO353_19685	0.47	-0.9
4,317,397	-		AO353_19685	0.47	-0.9
4,317,511	-		AO353_19685	0.73	-1.4
4,317,582	-		AO353_19685	0.89	+0.3
4,317,627	+				-0.2
4,317,628	-				-0.8
4,317,628	-				-1.8
4,317,693	+				-0.8
4,317,693	+				+1.6
4,317,693	+				+0.7
4,317,693	+				+0.6
4,317,693	+				-0.1
4,317,693	+				+0.4
4,317,694	-				-0.1
4,317,759	+				-0.6
4,317,759	+				+0.9
4,317,759	+				+0.9
4,317,759	+				+0.2
4,317,759	+				-0.3
4,317,839	+				+0.6
4,317,840	-				-1.2
4,317,840	-				-0.4
4,317,840	-				+0.5
4,317,840	-				-0.7
4,317,840	-				+0.5
4,317,908	+				+1.9
4,317,908	+				-0.6
4,317,908	+				+0.3
4,317,908	+				-0.9
4,317,908	+				-0.1
4,317,908	+				-1.1
4,317,909	-				-0.4
4,317,909	-				+1.3
4,317,909	-				-1.5
4,317,909	-				+0.2
4,317,909	-				+1.3
4,317,909	-				-0.1
4,317,909	-				-0.6
4,317,909	-				-0.7
4,317,909	-				-1.9
4,317,909	-				+0.3
4,317,909	-				-1.0
4,317,909	-				-0.5
4,317,909	-				-0.1
4,317,974	+				-0.4
4,317,974	+				-0.4
4,317,974	+				-0.1
4,317,974	+				-0.1
4,317,974	+				-1.6
4,317,974	+				-0.1
4,317,974	+				-1.1
4,317,975	-				-1.4
4,317,975	-				+0.2
4,317,975	-				-1.9
4,317,975	-				+0.4
4,317,975	-				-0.1
4,317,975	-				-0.3
4,317,984	+				+0.2
4,317,984	+				+0.1
4,317,984	+				+0.7
4,317,984	+				-0.7
4,317,985	-				-0.9
4,318,031	+				-0.9
4,318,031	+				-0.5
4,318,031	+				+0.9
4,318,031	+				+0.8
4,318,032	-				+1.9
4,318,032	-				+2.9
4,318,065	+				+0.6
4,318,065	+				-0.6
4,318,065	+				+0.3
4,318,066	-				-0.3
4,318,066	-				-0.2
4,318,066	-				+0.1
4,318,066	-				+0.0
4,318,066	-				-0.4
4,318,310	+		AO353_19690	0.16	+0.1
4,318,310	+		AO353_19690	0.16	+0.9
4,318,311	-		AO353_19690	0.16	-1.9
4,318,331	+		AO353_19690	0.16	-0.4
4,318,331	+		AO353_19690	0.16	-0.9
4,318,332	-		AO353_19690	0.16	-0.9
4,318,332	-		AO353_19690	0.16	-0.4
4,318,332	-		AO353_19690	0.16	+0.4
4,318,332	-		AO353_19690	0.16	+0.0
4,318,332	-		AO353_19690	0.16	+1.1
4,318,343	+		AO353_19690	0.16	-0.9
4,318,343	+		AO353_19690	0.16	+0.6
4,318,343	+		AO353_19690	0.16	-0.1
4,318,343	+		AO353_19690	0.16	-0.9
4,318,343	+		AO353_19690	0.16	+0.6
4,318,344	-		AO353_19690	0.16	-0.5
4,318,344	-		AO353_19690	0.16	+0.5
4,318,344	-		AO353_19690	0.16	-1.1
4,318,344	-		AO353_19690	0.16	+0.0
4,318,344	-		AO353_19690	0.16	-1.7
4,318,344	-		AO353_19690	0.16	+1.0
4,318,344	-		AO353_19690	0.16	+1.2
4,318,344	-		AO353_19690	0.16	+1.5
4,318,344	-		AO353_19690	0.16	-0.2
4,318,345	+		AO353_19690	0.17	-0.2
4,318,345	+		AO353_19690	0.17	+0.1
4,318,345	+		AO353_19690	0.17	+0.4
4,318,345	+		AO353_19690	0.17	-0.8
4,318,346	-		AO353_19690	0.17	+1.2
4,318,418	+		AO353_19690	0.18	-1.8
4,318,418	+		AO353_19690	0.18	-2.1
4,318,418	+		AO353_19690	0.18	-0.2
4,318,418	+		AO353_19690	0.18	+2.6
4,318,418	+		AO353_19690	0.18	-0.3
4,318,418	+		AO353_19690	0.18	+0.1
4,318,419	-		AO353_19690	0.19	+1.4
4,318,419	-		AO353_19690	0.19	+0.4
4,318,419	-		AO353_19690	0.19	-1.4
4,318,419	-		AO353_19690	0.19	-0.4
4,318,419	-		AO353_19690	0.19	-0.2
4,318,419	-		AO353_19690	0.19	+0.1
4,318,419	-		AO353_19690	0.19	+0.3
4,318,419	-		AO353_19690	0.19	+0.5
4,318,419	-		AO353_19690	0.19	-0.9
4,318,419	-				-0.9
4,318,782	-		AO353_19690	0.28	-2.0
4,318,902	-		AO353_19690	0.32	-1.3
4,318,902	-		AO353_19690	0.32	+1.1
4,318,902	-		AO353_19690	0.32	-0.9
4,318,904	+		AO353_19690	0.32	+0.7
4,318,904	+		AO353_19690	0.32	+0.8
4,318,904	+		AO353_19690	0.32	-1.2
4,318,905	-		AO353_19690	0.32	-0.1
4,318,905	-		AO353_19690	0.32	+0.4
4,318,905	-		AO353_19690	0.32	-0.0
4,318,905	-		AO353_19690	0.32	-0.5
4,318,905	-		AO353_19690	0.32	-1.1
4,318,905	-		AO353_19690	0.32	-0.1
4,318,905	-		AO353_19690	0.32	+2.1
4,318,958	+		AO353_19690	0.33	+0.7
4,318,958	+		AO353_19690	0.33	-0.1
4,318,958	+		AO353_19690	0.33	+0.9
4,318,958	+		AO353_19690	0.33	+0.9
4,318,958	+		AO353_19690	0.33	+0.5
4,318,958	+		AO353_19690	0.33	-0.6
4,318,958	+		AO353_19690	0.33	-0.3
4,318,958	+		AO353_19690	0.33	+0.6
4,318,959	-		AO353_19690	0.33	-0.5
4,318,959	-		AO353_19690	0.33	-0.6
4,319,048	-		AO353_19690	0.36	-0.1
4,319,054	+		AO353_19690	0.36	-0.4
4,319,054	+		AO353_19690	0.36	+0.5
4,319,054	+		AO353_19690	0.36	-1.3
4,319,054	+		AO353_19690	0.36	-1.1
4,319,054	+		AO353_19690	0.36	+1.9
4,319,055	-		AO353_19690	0.36	-0.2
4,319,055	-		AO353_19690	0.36	-0.4
4,319,201	+		AO353_19690	0.40	+0.9
4,319,202	-		AO353_19690	0.40	-0.5
4,319,339	+		AO353_19690	0.43	-0.4
4,319,340	-		AO353_19690	0.44	+1.2
4,319,394	-		AO353_19690	0.45	+1.7
4,319,394	-		AO353_19690	0.45	+1.2
4,319,411	+		AO353_19690	0.45	-0.3
4,319,411	+		AO353_19690	0.45	+0.0
4,319,411	+		AO353_19690	0.45	+1.9
4,319,412	-		AO353_19690	0.45	-0.5
4,319,412	-		AO353_19690	0.45	-0.3
4,319,732	+		AO353_19690	0.54	+0.5
4,319,732	+		AO353_19690	0.54	-0.9
4,319,732	+		AO353_19690	0.54	-0.2
4,319,733	-		AO353_19690	0.54	+0.7
4,319,733	-		AO353_19690	0.54	-0.3
4,320,104	+				+2.3
4,320,105	-		AO353_19690	0.64	+0.4
4,320,105	-		AO353_19690	0.64	+0.9
4,320,281	+		AO353_19690	0.69	+0.1
4,320,281	+		AO353_19690	0.69	-0.5
4,320,281	+		AO353_19690	0.69	-1.4
4,320,281	+		AO353_19690	0.69	-0.6
4,320,281	+		AO353_19690	0.69	-1.1
4,320,282	-		AO353_19690	0.69	+0.6
4,320,282	-		AO353_19690	0.69	-0.4
4,320,282	-		AO353_19690	0.69	-0.6
4,320,282	-		AO353_19690	0.69	-0.3
4,320,575	+		AO353_19690	0.77	-0.3
4,320,575	+		AO353_19690	0.77	+0.9
4,320,576	-		AO353_19690	0.77	-0.9
4,320,576	-		AO353_19690	0.77	-0.5
4,320,576	-		AO353_19690	0.77	-0.2
4,320,576	-		AO353_19690	0.77	+0.4
4,320,576	-		AO353_19690	0.77	-0.5
4,320,576	-		AO353_19690	0.77	-0.4
4,320,576	-		AO353_19690	0.77	-0.4
4,320,576	-		AO353_19690	0.77	+0.7
4,320,719	+		AO353_19690	0.81	-0.6
4,320,720	-		AO353_19690	0.81	-0.1
4,320,753	-		AO353_19690	0.82	-0.2
4,320,995	+		AO353_19690	0.88	-0.8
4,320,996	-		AO353_19690	0.88	-0.6
4,320,996	-		AO353_19690	0.88	+0.1
4,321,037	+		AO353_19690	0.90	-0.4
4,321,037	+		AO353_19690	0.90	-1.2
4,321,038	-		AO353_19690	0.90	+0.5
4,321,139	+				-0.5
4,321,175	+				+0.7
4,321,175	+				-1.2
4,321,175	+				-0.2
4,321,175	+				+0.4
4,321,175	+				+0.3
4,321,175	+				+0.4
4,321,175	+				-0.1
4,321,175	+				-0.4
4,321,176	-				-0.9
4,321,176	-				+1.2
4,321,176	-				-0.4
4,321,176	-				-0.4
4,321,176	-				+0.9
4,321,181	+				-0.4
4,321,181	+				+0.8
4,321,182	-				+0.8
4,321,182	-				-1.4
4,321,182	-				-1.2
4,321,182	-				-0.9
4,321,182	-				-0.6
4,321,182	-				-1.3
4,321,228	+				-0.4
4,321,286	+				-0.1
4,321,287	-				+0.6
4,321,346	+				-0.9
4,321,346	+				-0.9
4,321,416	-				-0.6
4,321,439	+				-0.8
4,321,632	-		AO353_19695	0.16	-0.1
4,321,632	-		AO353_19695	0.16	-1.4
4,321,632	-		AO353_19695	0.16	+0.9
4,321,660	+		AO353_19695	0.19	+0.4
4,321,660	+		AO353_19695	0.19	+1.2
4,321,826	+		AO353_19695	0.34	+0.5
4,321,826	+		AO353_19695	0.34	-1.5
4,321,826	+		AO353_19695	0.34	+0.1
4,321,827	-		AO353_19695	0.34	-1.6
4,321,827	-		AO353_19695	0.34	+0.2
4,321,827	-		AO353_19695	0.34	+1.1
4,321,827	-		AO353_19695	0.34	-1.5
4,321,827	-		AO353_19695	0.34	+0.1
4,321,827	-		AO353_19695	0.34	-1.3
4,321,827	-		AO353_19695	0.34	+0.5
4,321,827	-		AO353_19695	0.34	-0.4
4,321,827	-		AO353_19695	0.34	+1.1
4,321,827	-		AO353_19695	0.34	+0.8
4,321,883	+		AO353_19695	0.39	+1.2
4,321,883	+		AO353_19695	0.39	+0.6
4,321,883	+		AO353_19695	0.39	-0.9
4,321,883	+		AO353_19695	0.39	-0.3
4,321,883	+		AO353_19695	0.39	-0.6
4,321,884	-		AO353_19695	0.39	-0.6
4,321,884	-		AO353_19695	0.39	+0.4
4,321,884	-		AO353_19695	0.39	-0.4
4,322,369	+		AO353_19695	0.83	+1.3
4,322,369	+		AO353_19695	0.83	+0.6
4,322,369	+		AO353_19695	0.83	+1.1
4,322,370	-		AO353_19695	0.83	+0.6
4,322,401	+		AO353_19695	0.86	+0.4
4,322,401	+		AO353_19695	0.86	+0.6
4,322,402	-		AO353_19695	0.86	+0.8
4,322,402	-		AO353_19695	0.86	+0.4
4,322,402	-		AO353_19695	0.86	-0.2
4,322,402	-		AO353_19695	0.86	+0.7
4,322,402	-		AO353_19695	0.86	+0.3
4,322,402	-		AO353_19695	0.86	+0.9
4,322,402	-		AO353_19695	0.86	+0.1