Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19150

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
4,199,569	+		AO353_19145	0.29	-0.3
4,199,604	+				+1.4
4,199,604	+		AO353_19145	0.33	+0.2
4,199,604	+		AO353_19145	0.33	+1.0
4,199,605	-		AO353_19145	0.33	+0.8
4,199,605	-		AO353_19145	0.33	-0.8
4,199,605	-		AO353_19145	0.33	+1.3
4,199,605	-		AO353_19145	0.33	+0.2
4,199,605	-		AO353_19145	0.33	+0.7
4,199,605	-		AO353_19145	0.33	-0.6
4,199,605	-		AO353_19145	0.33	+0.3
4,199,607	+		AO353_19145	0.34	-1.3
4,199,607	+		AO353_19145	0.34	-1.1
4,199,608	-		AO353_19145	0.34	+1.4
4,199,868	+		AO353_19145	0.63	+1.7
4,199,868	+		AO353_19145	0.63	-1.5
4,199,869	-		AO353_19145	0.63	-0.2
4,199,869	-		AO353_19145	0.63	-1.4
4,200,203	-				-1.4
4,200,219	+				-0.0
4,200,219	+				+1.0
4,200,220	-				+0.5
4,200,220	-				-0.2
4,200,223	+				+2.0
4,200,223	+				-0.6
4,200,223	+				+1.3
4,200,223	+				+0.3
4,200,223	+				-0.2
4,200,223	+				+0.5
4,200,223	+				+0.7
4,200,223	+				-0.9
4,200,223	+				-0.7
4,200,223	+				-0.3
4,200,223	+				-1.7
4,200,224	-				-1.3
4,200,224	-				+0.5
4,200,224	-				+0.6
4,200,224	-				+1.3
4,200,224	-				+0.3
4,200,224	-				+0.2
4,200,224	-				-1.2
4,200,224	-				+0.2
4,200,227	+				-1.8
4,200,227	+				-0.1
4,200,228	-				-0.8
4,200,228	-				-0.6
4,200,228	-				+0.1
4,200,232	+				-1.0
4,200,242	+				+0.5
4,200,244	+				+0.8
4,200,244	+				-1.3
4,200,244	+				-0.1
4,200,244	+				-0.1
4,200,244	+				+0.3
4,200,244	+				-0.8
4,200,244	+				-0.0
4,200,244	+				-0.3
4,200,244	+				-1.2
4,200,245	-				+0.1
4,200,245	-				+0.2
4,200,245	-				+0.4
4,200,245	-				-1.6
4,200,245	-				-0.1
4,200,245	-				+0.5
4,200,245	-				-0.3
4,200,245	-				-1.0
4,200,245	-				-0.7
4,200,245	-				-0.4
4,200,246	+				-0.1
4,200,246	+				+1.0
4,200,246	+				+0.3
4,200,246	+				+0.7
4,200,246	+				+0.4
4,200,246	+				-0.0
4,200,246	+				+1.4
4,200,246	+				-0.3
4,200,246	+				-0.3
4,200,246	+				-0.1
4,200,246	+				-0.3
4,200,246	+				+0.3
4,200,246	+				+1.3
4,200,246	+				-0.3
4,200,246	+				-1.2
4,200,246	+				-1.2
4,200,246	+				+0.6
4,200,246	+				+1.1
4,200,247	-				-0.4
4,200,247	-				+0.5
4,200,247	-				+0.5
4,200,247	-				-0.3
4,200,247	-				+0.5
4,200,247	-				-0.4
4,200,247	-				-0.1
4,200,247	-				+1.0
4,200,247	-				-1.0
4,200,247	-				-2.0
4,200,247	-				-2.3
4,200,247	-				+0.4
4,200,247	-				-0.1
4,200,247	-				+2.0
4,200,247	-				-1.7
4,200,247	-				+0.4
4,200,280	+				-0.7
4,200,297	+				-1.1
4,200,298	-				-1.7
4,200,298	-				-0.2
4,200,310	+				+0.1
4,200,310	+				+0.3
4,200,310	+				-0.9
4,200,310	+				-0.9
4,200,311	-				+0.9
4,200,311	-				+0.1
4,200,311	-				+0.5
4,200,311	-				-1.5
4,200,311	-				-0.6
4,200,311	-				+0.1
4,200,345	+				+1.4
4,200,345	+				+0.3
4,200,346	-				+0.5
4,200,346	-				-0.7
4,200,349	+				+0.1
4,200,349	+				+0.4
4,200,349	+				+2.3
4,200,349	+				+0.6
4,200,349	+				-0.7
4,200,349	+				+0.5
4,200,349	+				-0.2
4,200,349	+				+1.0
4,200,349	+				-1.5
4,200,349	+				-0.3
4,200,349	+				-0.2
4,200,349	+				-0.2
4,200,350	-				+0.2
4,200,350	-				+1.7
4,200,350	-				+1.6
4,200,350	-				+1.3
4,200,350	-				-0.8
4,200,350	-				-0.1
4,200,350	-				+0.1
4,200,455	+				+0.6
4,200,455	+				+0.1
4,200,455	+				-1.1
4,200,455	+				-1.4
4,200,455	+				-0.9
4,200,455	+				-0.9
4,200,455	+				+1.4
4,200,455	+				+0.2
4,200,455	+				+0.8
4,200,455	+				-1.3
4,200,455	+				-2.1
4,200,455	+				+0.2
4,200,455	+				-1.3
4,200,455	+				-0.7
4,200,456	-				-0.2
4,200,456	-				+1.2
4,200,456	-				-2.1
4,200,456	-				+0.7
4,200,456	-				+0.1
4,200,456	-				-0.0
4,200,456	-				-0.3
4,200,456	-				-1.2
4,200,456	-				-0.3
4,200,456	-				+0.2
4,200,456	-				-0.0
4,200,456	-				+1.0
4,200,456	-				+0.0
4,200,456	-				-1.4
4,200,456	-				+0.6
4,200,456	-				-0.5
4,200,456	-				-0.3
4,200,456	-				-0.4
4,200,456	-				+0.2
4,200,469	-				-1.2
4,200,512	-				-0.6
4,200,520	+				+0.7
4,200,727	+		AO353_19150	0.18	-1.1
4,200,728	-		AO353_19150	0.18	+0.2
4,200,728	-		AO353_19150	0.18	+1.1
4,200,934	+		AO353_19150	0.35	-1.5
4,200,934	+		AO353_19150	0.35	+0.2
4,200,935	-		AO353_19150	0.35	-0.7
4,200,935	-		AO353_19150	0.35	+0.3
4,200,935	-		AO353_19150	0.35	+0.5
4,201,096	+		AO353_19150	0.48	+3.6
4,201,096	+		AO353_19150	0.48	-0.2
4,201,096	+		AO353_19150	0.48	+0.6
4,201,096	+		AO353_19150	0.48	-0.9
4,201,096	+		AO353_19150	0.48	-0.6
4,201,096	+		AO353_19150	0.48	+0.2
4,201,097	-		AO353_19150	0.48	-0.3
4,201,117	-		AO353_19150	0.50	+0.1
4,201,117	-		AO353_19150	0.50	+0.1
4,201,171	+		AO353_19150	0.55	+0.0
4,201,172	-		AO353_19150	0.55	+0.8
4,201,172	-		AO353_19150	0.55	+0.3
4,201,172	-		AO353_19150	0.55	+0.4
4,201,288	+		AO353_19150	0.64	-0.1
4,201,288	+		AO353_19150	0.64	+0.2
4,201,288	+		AO353_19150	0.64	+0.2
4,201,288	+		AO353_19150	0.64	+0.2
4,201,288	+		AO353_19150	0.64	-0.1
4,201,288	+		AO353_19150	0.64	+2.5
4,201,289	-		AO353_19150	0.64	+0.3
4,201,289	-		AO353_19150	0.64	+1.3
4,201,289	-		AO353_19150	0.64	-0.1
4,201,289	-		AO353_19150	0.64	-0.6
4,201,289	-		AO353_19150	0.64	+0.3
4,201,289	-		AO353_19150	0.64	-1.0
4,201,359	+		AO353_19150	0.70	+0.1
4,201,359	+		AO353_19150	0.70	+1.4
4,201,360	-		AO353_19150	0.70	+0.6
4,201,429	+		AO353_19150	0.76	-0.7
4,201,429	+		AO353_19150	0.76	-0.4
4,201,429	+		AO353_19150	0.76	-1.2
4,201,429	+		AO353_19150	0.76	-0.1
4,201,429	+		AO353_19150	0.76	-0.0
4,201,429	+		AO353_19150	0.76	+0.4
4,201,429	+		AO353_19150	0.76	-0.7
4,201,429	+		AO353_19150	0.76	-0.2
4,201,430	-		AO353_19150	0.76	-0.9
4,201,430	-		AO353_19150	0.76	-0.0
4,201,430	-		AO353_19150	0.76	+0.2
4,201,430	-		AO353_19150	0.76	-0.2
4,201,430	-		AO353_19150	0.76	+1.2
4,201,430	-		AO353_19150	0.76	+0.6
4,201,430	-		AO353_19150	0.76	-1.8
4,201,430	-		AO353_19150	0.76	-1.7
4,201,430	-		AO353_19150	0.76	+0.2
4,201,430	-		AO353_19150	0.76	-0.6
4,201,430	-		AO353_19150	0.76	-2.1
4,201,455	+		AO353_19150	0.78	-0.1
4,201,455	+		AO353_19150	0.78	-0.2
4,201,455	+		AO353_19150	0.78	-1.3
4,201,455	+		AO353_19150	0.78	+0.3
4,201,455	+		AO353_19150	0.78	+1.0
4,201,455	+		AO353_19150	0.78	+0.0
4,201,455	+		AO353_19150	0.78	+1.5
4,201,456	-		AO353_19150	0.78	+1.5
4,201,456	-		AO353_19150	0.78	+1.0
4,201,456	-		AO353_19150	0.78	+0.2
4,201,456	-		AO353_19150	0.78	-0.4
4,201,471	+		AO353_19150	0.79	+0.6
4,201,471	+		AO353_19150	0.79	-0.3
4,201,471	+		AO353_19150	0.79	-1.8
4,201,472	-		AO353_19150	0.79	-0.7
4,201,472	-		AO353_19150	0.79	+0.4
4,201,472	-		AO353_19150	0.79	-0.3
4,201,472	-		AO353_19150	0.79	+0.1
4,201,474	+		AO353_19150	0.80	+0.5
4,201,474	+		AO353_19150	0.80	+0.0
4,201,474	+		AO353_19150	0.80	-0.1
4,201,474	+		AO353_19150	0.80	-1.8
4,201,474	+		AO353_19150	0.80	-0.6
4,201,475	-		AO353_19150	0.80	-1.2
4,201,475	-		AO353_19150	0.80	-1.5
4,201,475	-		AO353_19150	0.80	-0.9
4,201,522	+		AO353_19150	0.83	+0.1
4,201,523	-		AO353_19150	0.84	+2.0
4,201,544	+		AO353_19150	0.85	-0.9
4,201,545	-		AO353_19150	0.85	+0.3
4,201,759	+				+0.5
4,201,759	+				-0.4
4,201,759	+				-1.2
4,201,759	+				+1.1
4,201,759	+				+0.9
4,201,759	+				-0.5
4,201,759	+				-0.5
4,201,759	+				-0.2
4,201,759	+				+0.5
4,201,760	-				-0.7
4,201,760	-				-1.2
4,201,760	-				-0.1
4,201,760	-				-0.1
4,201,760	-				+1.6
4,201,760	-				+0.3
4,201,760	-				-0.9
4,201,766	+				+0.5
4,201,767	-				-0.7
4,201,767	-				-0.8
4,201,767	-				-0.6
4,201,771	+				-0.3
4,201,771	+				-0.9
4,201,772	-				+0.3
4,201,867	+				-0.4
4,201,883	+				+0.7
4,201,883	+				-2.0
4,201,883	+				+0.1
4,201,883	+				-1.2
4,201,883	+				-0.7
4,201,883	+				-1.5
4,201,883	+				-1.5
4,201,883	+				-1.1
4,201,883	+				+0.2
4,201,883	+				-0.8
4,201,883	+				-0.4
4,201,883	+				+0.2
4,201,883	+				+0.6
4,201,883	+				-2.2
4,201,883	+				+1.1
4,201,883	+				+0.4
4,201,883	+				-3.2
4,201,883	+				+1.2
4,201,883	+				-0.3
4,201,884	-				-0.1
4,201,884	-				-0.5
4,201,884	-				+0.7
4,201,884	-				+0.4
4,201,884	-				+0.2
4,201,884	-				-0.4
4,201,884	-				+0.9
4,201,884	-				+2.7
4,201,884	-				-0.1
4,201,910	+				-1.1
4,201,910	+				+0.7
4,201,910	+				-0.6
4,201,911	-				+0.2
4,201,911	-				+1.7
4,201,939	+				-0.1
4,201,939	+				-0.6
4,201,939	+				-0.1
4,201,939	+				+0.3
4,201,939	+				+0.5
4,201,940	-				-1.2
4,201,940	-				+0.4
4,201,940	-				+1.0
4,202,003	+		AO353_19155	0.14	+0.2
4,202,003	+		AO353_19155	0.14	-0.3
4,202,003	+		AO353_19155	0.14	-0.4
4,202,003	+		AO353_19155	0.14	+0.5
4,202,004	-		AO353_19155	0.15	+1.5
4,202,004	-		AO353_19155	0.15	-0.4
4,202,004	-		AO353_19155	0.15	+0.5
4,202,004	-		AO353_19155	0.15	+0.2
4,202,004	-		AO353_19155	0.15	-0.0
4,202,051	+		AO353_19155	0.27	-0.7
4,202,051	+		AO353_19155	0.27	-0.5
4,202,051	+		AO353_19155	0.27	+1.2
4,202,051	+		AO353_19155	0.27	-0.6
4,202,051	+		AO353_19155	0.27	-2.7
4,202,051	+		AO353_19155	0.27	-1.2
4,202,051	+		AO353_19155	0.27	-1.4
4,202,051	+		AO353_19155	0.27	-0.3
4,202,052	-		AO353_19155	0.27	+0.7
4,202,052	-		AO353_19155	0.27	-0.4
4,202,052	-		AO353_19155	0.27	-0.3
4,202,052	-		AO353_19155	0.27	-0.7
4,202,052	-		AO353_19155	0.27	-0.4
4,202,052	-		AO353_19155	0.27	+0.1
4,202,052	-		AO353_19155	0.27	-0.3
4,202,052	-		AO353_19155	0.27	-0.3
4,202,052	-		AO353_19155	0.27	+0.1
4,202,078	+		AO353_19155	0.33	-1.2
4,202,078	+		AO353_19155	0.33	+0.5
4,202,078	+		AO353_19155	0.33	+0.0
4,202,078	+		AO353_19155	0.33	-0.3
4,202,078	+		AO353_19155	0.33	-1.0
4,202,079	-		AO353_19155	0.34	-0.3
4,202,079	-		AO353_19155	0.34	+2.0
4,202,079	-		AO353_19155	0.34	+0.8
4,202,156	+		AO353_19155	0.53	-0.1
4,202,156	+		AO353_19155	0.53	-1.0
4,202,156	+		AO353_19155	0.53	+0.4
4,202,156	+		AO353_19155	0.53	+0.6
4,202,156	+		AO353_19155	0.53	-0.9
4,202,156	+		AO353_19155	0.53	+0.1
4,202,156	+		AO353_19155	0.53	-0.6
4,202,156	+		AO353_19155	0.53	-0.3
4,202,156	+		AO353_19155	0.53	+2.4
4,202,156	+		AO353_19155	0.53	-0.7
4,202,157	-		AO353_19155	0.53	+2.2
4,202,157	-		AO353_19155	0.53	-0.6
4,202,157	-		AO353_19155	0.53	+0.0
4,202,157	-		AO353_19155	0.53	-0.9
4,202,157	-		AO353_19155	0.53	+0.5
4,202,157	-		AO353_19155	0.53	+0.4
4,202,157	-		AO353_19155	0.53	-1.2
4,202,262	+		AO353_19155	0.80	-0.7
4,202,262	+		AO353_19155	0.80	+0.1
4,202,262	+		AO353_19155	0.80	-0.9
4,202,262	+		AO353_19155	0.80	-0.2
4,202,262	+		AO353_19155	0.80	+0.3
4,202,262	+		AO353_19155	0.80	-0.4
4,202,262	+		AO353_19155	0.80	+0.2
4,202,262	+		AO353_19155	0.80	-0.1
4,202,262	+		AO353_19155	0.80	-0.6
4,202,263	-		AO353_19155	0.80	+0.1
4,202,263	-		AO353_19155	0.80	-0.7
4,202,263	-		AO353_19155	0.80	-0.0
4,202,263	-		AO353_19155	0.80	+2.0
4,202,263	-		AO353_19155	0.80	-0.4
4,202,263	-		AO353_19155	0.80	+1.2
4,202,297	+		AO353_19155	0.89	-0.2
4,202,340	-				-1.6
4,202,340	-				-0.8
4,202,478	+				-1.4
4,202,478	+				-1.0
4,202,478	+				+0.8
4,202,479	-				+0.4
4,202,479	-				+0.6
4,202,479	-				+2.0
4,202,541	-				+1.7
4,202,562	+		AO353_19160	0.21	+0.6
4,202,562	+		AO353_19160	0.21	-2.2
4,202,584	+		AO353_19160	0.26	+0.4
4,202,584	+		AO353_19160	0.26	+1.2
4,202,584	+		AO353_19160	0.26	+1.1
4,202,584	+		AO353_19160	0.26	-0.5
4,202,584	+		AO353_19160	0.26	+0.8
4,202,584	+		AO353_19160	0.26	+0.2
4,202,584	+		AO353_19160	0.26	-0.5
4,202,585	-		AO353_19160	0.26	-0.3
4,202,585	-		AO353_19160	0.26	-1.9
4,202,614	+		AO353_19160	0.32	+0.5
4,202,665	-		AO353_19160	0.43	+0.9