Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18275

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
4,029,047	+		AO353_18265	0.88	-0.9
4,029,047	+		AO353_18265	0.88	+0.7
4,029,047	+		AO353_18265	0.88	+0.9
4,029,047	+		AO353_18265	0.88	+0.2
4,029,047	+		AO353_18265	0.88	+0.1
4,029,048	-		AO353_18265	0.88	-0.7
4,029,048	-		AO353_18265	0.88	-0.1
4,029,090	+				+1.4
4,029,091	-				+0.2
4,029,091	-				+0.0
4,029,174	+				-0.3
4,029,174	+				-0.9
4,029,174	+				-1.1
4,029,175	-				-0.1
4,029,175	-				+0.9
4,029,175	-				+1.0
4,029,175	-				+2.5
4,029,177	+				-0.0
4,029,178	-				+0.5
4,029,178	-				-0.3
4,029,178	-				+1.6
4,029,178	-				-0.5
4,029,181	+				+0.3
4,029,181	+				+1.0
4,029,181	+				+0.5
4,029,181	+				-1.1
4,029,181	+				+0.7
4,029,181	+				-0.3
4,029,181	+				+0.3
4,029,181	+				-0.7
4,029,181	+				-1.3
4,029,181	+				+0.4
4,029,181	+				+1.3
4,029,181	+				-0.9
4,029,182	-				+0.8
4,029,182	-				+1.0
4,029,182	-				+0.8
4,029,182	-				-1.6
4,029,182	-				-0.1
4,029,182	-				+0.0
4,029,182	-				-1.4
4,029,182	-				-0.9
4,029,182	-				+0.9
4,029,182	-				+0.3
4,029,183	+				+0.4
4,029,183	+				-0.9
4,029,183	+				+0.2
4,029,183	+				+0.1
4,029,183	+				+0.2
4,029,183	+				-1.0
4,029,183	+				+0.3
4,029,183	+				-1.3
4,029,183	+				-1.1
4,029,183	+				+0.5
4,029,183	+				-0.9
4,029,183	+				-0.1
4,029,183	+				+0.3
4,029,183	+				+1.1
4,029,183	+				+0.1
4,029,183	+				+0.6
4,029,183	+				+0.5
4,029,183	+				-0.8
4,029,183	+				+0.1
4,029,183	+				-0.2
4,029,183	+				-1.3
4,029,183	+				-1.0
4,029,183	+				+0.1
4,029,183	+				+0.3
4,029,183	+				+0.0
4,029,183	+				+0.1
4,029,183	+				-2.5
4,029,184	-				-0.3
4,029,184	-				+0.2
4,029,184	-				-0.2
4,029,184	-				+1.1
4,029,184	-				+0.2
4,029,184	-				+0.3
4,029,184	-				-2.0
4,029,184	-				-0.3
4,029,184	-				+0.9
4,029,184	-				-1.2
4,029,184	-				-0.5
4,029,184	-				-0.0
4,029,184	-				-1.9
4,029,184	-				-0.3
4,029,184	-				+0.1
4,029,184	-				-0.2
4,029,184	-				-0.9
4,029,184	-				-0.7
4,029,184	-				-1.3
4,029,184	-				-1.9
4,029,184	-				+0.7
4,029,184	-				-1.0
4,029,184	-				-0.9
4,029,184	-				+1.2
4,029,184	-				+0.1
4,029,184	-				-1.7
4,029,184	-				+0.9
4,029,184	-				-1.6
4,029,184	-				-0.3
4,029,184	-				-0.1
4,029,184	-				+0.2
4,029,184	-				+0.6
4,029,184	-				-1.2
4,029,184	-				-1.1
4,029,184	-				+0.2
4,029,184	-				+0.7
4,029,184	-				-0.1
4,029,184	-				-0.9
4,029,236	-				+0.7
4,029,261	+				-0.2
4,029,261	+				-0.0
4,029,261	+				+0.9
4,029,273	+				+0.4
4,029,273	+				+0.2
4,029,273	+				-0.1
4,029,274	-				-0.4
4,029,285	+				+1.3
4,029,323	+				-2.1
4,029,323	+				+0.7
4,029,323	+				-0.7
4,029,323	+				+0.5
4,029,324	-				-1.3
4,029,324	-				-0.1
4,029,324	-				+0.2
4,029,324	-				-1.2
4,029,358	-				-0.9
4,029,358	-				+0.1
4,029,577	+		AO353_18270	0.40	+0.5
4,029,578	-		AO353_18270	0.40	-0.0
4,029,578	-		AO353_18270	0.40	+0.4
4,029,578	-		AO353_18270	0.40	+0.5
4,029,608	-		AO353_18270	0.45	-0.5
4,029,608	-		AO353_18270	0.45	-1.7
4,029,649	+		AO353_18270	0.53	+1.8
4,029,650	-		AO353_18270	0.53	+2.5
4,029,732	+		AO353_18270	0.68	+1.0
4,029,750	+		AO353_18270	0.71	+0.1
4,029,750	+		AO353_18270	0.71	+0.8
4,029,750	+		AO353_18270	0.71	-0.1
4,029,751	-		AO353_18270	0.71	+0.6
4,029,751	-		AO353_18270	0.71	+0.5
4,029,751	-		AO353_18270	0.71	-1.4
4,029,751	-		AO353_18270	0.71	-0.2
4,029,751	-		AO353_18270	0.71	+1.9
4,029,751	-		AO353_18270	0.71	-0.1
4,029,751	-		AO353_18270	0.71	-0.3
4,029,751	-		AO353_18270	0.71	+0.7
4,029,875	+				+0.9
4,029,875	+				+0.4
4,029,875	+				+0.2
4,029,875	+				-0.4
4,029,875	+				+0.5
4,029,875	+				-0.1
4,029,875	+				-0.9
4,029,875	+				-0.3
4,029,876	-				-0.9
4,029,876	-				-0.0
4,029,876	-				+0.3
4,029,876	-				-0.0
4,029,876	-				-1.3
4,029,876	-				+0.1
4,029,876	-				-1.2
4,029,876	-				+1.1
4,029,878	+				+0.3
4,029,878	+				-0.9
4,029,878	+				-2.5
4,029,878	+				+0.5
4,029,878	+				+0.5
4,029,878	+				-1.1
4,029,879	-				-0.0
4,029,879	-				-1.0
4,029,879	-				+3.7
4,030,049	+		AO353_18275	0.17	+0.3
4,030,049	+		AO353_18275	0.17	+1.1
4,030,049	+		AO353_18275	0.17	+0.2
4,030,049	+		AO353_18275	0.17	-0.5
4,030,049	+		AO353_18275	0.17	+0.8
4,030,049	+		AO353_18275	0.17	-0.0
4,030,050	-		AO353_18275	0.17	-0.4
4,030,050	-		AO353_18275	0.17	+0.4
4,030,050	-		AO353_18275	0.17	+0.8
4,030,053	+		AO353_18275	0.17	+0.6
4,030,053	+		AO353_18275	0.17	-0.9
4,030,053	+		AO353_18275	0.17	+0.3
4,030,053	+		AO353_18275	0.17	-1.1
4,030,053	+		AO353_18275	0.17	-0.5
4,030,053	+		AO353_18275	0.17	-0.2
4,030,053	+		AO353_18275	0.17	-0.1
4,030,053	+		AO353_18275	0.17	+0.3
4,030,054	-		AO353_18275	0.17	-0.0
4,030,054	-		AO353_18275	0.17	-0.9
4,030,054	-		AO353_18275	0.17	-1.0
4,030,054	-		AO353_18275	0.17	+0.8
4,030,054	-		AO353_18275	0.17	-0.7
4,030,054	-		AO353_18275	0.17	-0.0
4,030,054	-		AO353_18275	0.17	+0.3
4,030,054	-		AO353_18275	0.17	-1.0
4,030,080	+		AO353_18275	0.21	-2.6
4,030,080	+		AO353_18275	0.21	-0.5
4,030,176	+		AO353_18275	0.33	+0.9
4,030,177	-		AO353_18275	0.33	+0.1
4,030,177	-		AO353_18275	0.33	+0.9
4,030,177	-		AO353_18275	0.33	-0.0
4,030,177	-		AO353_18275	0.33	-1.5
4,030,211	+		AO353_18275	0.37	-1.4
4,030,216	+		AO353_18275	0.38	+1.1
4,030,216	+		AO353_18275	0.38	-0.4
4,030,216	+		AO353_18275	0.38	-0.3
4,030,285	+		AO353_18275	0.46	+1.2
4,030,286	-		AO353_18275	0.46	+0.3
4,030,329	+		AO353_18275	0.52	+0.2
4,030,329	+		AO353_18275	0.52	-1.3
4,030,387	+		AO353_18275	0.59	-0.7
4,030,387	+		AO353_18275	0.59	-0.7
4,030,388	-		AO353_18275	0.59	-0.1
4,030,388	-		AO353_18275	0.59	-1.0
4,030,388	-		AO353_18275	0.59	+1.1
4,030,388	-		AO353_18275	0.59	+0.4
4,030,388	-		AO353_18275	0.59	-0.4
4,030,521	+		AO353_18275	0.75	+0.3
4,030,559	+		AO353_18275	0.80	+0.5
4,030,560	-		AO353_18275	0.80	-0.6
4,030,671	+				-0.5
4,030,671	+				+1.7
4,030,671	+				+0.1
4,030,671	+				-0.9
4,030,671	+				+0.3
4,030,672	-				-1.4
4,030,681	-				+0.5
4,030,681	-				+1.1
4,030,681	-				-0.1
4,030,710	+				-1.0
4,030,710	+				+0.9
4,030,710	+				-1.5
4,030,711	-				-0.3
4,030,844	+		AO353_18280	0.12	+0.1
4,030,844	+		AO353_18280	0.12	-0.0
4,030,844	+		AO353_18280	0.12	+0.6
4,030,845	-		AO353_18280	0.12	-0.0
4,030,850	+		AO353_18280	0.13	+0.6
4,030,850	+		AO353_18280	0.13	+0.8
4,030,850	+				+2.1
4,030,850	+		AO353_18280	0.13	-0.9
4,030,850	+		AO353_18280	0.13	+0.4
4,030,850	+		AO353_18280	0.13	-1.3
4,030,851	-		AO353_18280	0.13	-0.3
4,030,851	-		AO353_18280	0.13	-0.0
4,030,851	-		AO353_18280	0.13	+0.3
4,030,851	-		AO353_18280	0.13	+1.8
4,030,851	-		AO353_18280	0.13	+0.6
4,030,851	-		AO353_18280	0.13	-0.3
4,030,851	-		AO353_18280	0.13	-0.1
4,030,851	-		AO353_18280	0.13	-0.8
4,030,851	-		AO353_18280	0.13	-0.6
4,030,902	+		AO353_18280	0.18	-0.5
4,030,902	+		AO353_18280	0.18	+0.5
4,030,902	+		AO353_18280	0.18	-0.3
4,030,902	+		AO353_18280	0.18	+1.2
4,030,902	+		AO353_18280	0.18	+0.1
4,030,903	-		AO353_18280	0.19	+0.6
4,031,158	+		AO353_18280	0.46	-0.9
4,031,158	+		AO353_18280	0.46	-0.2
4,031,159	-		AO353_18280	0.46	-0.9
4,031,159	-		AO353_18280	0.46	-1.0
4,031,257	+		AO353_18280	0.57	+0.9
4,031,257	+		AO353_18280	0.57	-0.5
4,031,257	+		AO353_18280	0.57	-1.3
4,031,257	+		AO353_18280	0.57	-1.6
4,031,257	+				+1.8
4,031,257	+		AO353_18280	0.57	-0.1
4,031,258	-		AO353_18280	0.57	+1.1
4,031,258	-		AO353_18280	0.57	-0.3
4,031,258	-				+2.8
4,031,258	-		AO353_18280	0.57	-0.9
4,031,258	-		AO353_18280	0.57	-0.3
4,031,258	-		AO353_18280	0.57	-0.1
4,031,258	-		AO353_18280	0.57	+0.7
4,031,258	-		AO353_18280	0.57	+0.4
4,031,258	-		AO353_18280	0.57	-0.3
4,031,258	-		AO353_18280	0.57	-0.2
4,031,388	+		AO353_18280	0.71	-0.9
4,031,388	+		AO353_18280	0.71	-0.3
4,031,389	-		AO353_18280	0.71	-0.3
4,031,407	+		AO353_18280	0.73	-1.0
4,031,408	-		AO353_18280	0.73	+0.3
4,031,408	-		AO353_18280	0.73	-0.6
4,031,408	-		AO353_18280	0.73	-1.3
4,031,539	-		AO353_18280	0.87	+0.8
4,031,539	-		AO353_18280	0.87	-0.2
4,031,540	+		AO353_18280	0.87	-1.6
4,031,540	+		AO353_18280	0.87	+0.1
4,031,540	+		AO353_18280	0.87	-1.0
4,031,540	+		AO353_18280	0.87	+0.4
4,031,540	+				-0.9
4,031,540	+		AO353_18280	0.87	+0.2
4,031,540	+		AO353_18280	0.87	-0.9
4,031,540	+				+0.3
4,031,540	+		AO353_18280	0.87	-0.2
4,031,541	-		AO353_18280	0.88	+1.3
4,031,541	-		AO353_18280	0.88	-0.3
4,031,541	-		AO353_18280	0.88	-2.0
4,031,541	-		AO353_18280	0.88	+0.4
4,031,541	-		AO353_18280	0.88	+0.3
4,031,541	-		AO353_18280	0.88	-1.2
4,031,614	+				-1.1
4,031,614	+				-1.2
4,031,614	+				-0.7
4,031,614	+				-0.8
4,031,614	+				+1.5
4,031,614	+				+0.2
4,031,615	-				+0.7
4,031,615	-				-0.1
4,031,674	+				+0.2
4,031,674	+				-0.3
4,031,674	+				+0.4
4,031,674	+				+0.9
4,031,675	-				-0.5