Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17245

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
3,811,217	-		AO353_17240	0.13	+1.1
3,811,275	+		AO353_17240	0.19	+1.1
3,811,275	+		AO353_17240	0.19	-0.3
3,811,275	+		AO353_17240	0.19	+0.9
3,811,275	+		AO353_17240	0.19	-0.5
3,811,275	+		AO353_17240	0.19	-0.6
3,811,279	+		AO353_17240	0.20	+4.0
3,811,280	-		AO353_17240	0.20	+0.2
3,811,280	-		AO353_17240	0.20	+0.9
3,811,280	-		AO353_17240	0.20	+0.6
3,811,303	+		AO353_17240	0.22	+1.3
3,811,303	+		AO353_17240	0.22	+0.9
3,811,386	+		AO353_17240	0.32	-2.0
3,811,386	+		AO353_17240	0.32	-0.4
3,811,387	-		AO353_17240	0.32	-0.0
3,811,446	+		AO353_17240	0.38	-0.5
3,811,446	+		AO353_17240	0.38	+0.8
3,811,447	-		AO353_17240	0.38	-0.4
3,811,447	-		AO353_17240	0.38	-0.1
3,811,447	-		AO353_17240	0.38	-0.6
3,811,482	+		AO353_17240	0.42	+1.3
3,811,482	+		AO353_17240	0.42	-0.3
3,811,482	+		AO353_17240	0.42	+0.2
3,811,482	+		AO353_17240	0.42	+1.4
3,811,482	+		AO353_17240	0.42	-0.9
3,811,483	-		AO353_17240	0.42	+0.7
3,811,483	-		AO353_17240	0.42	+0.4
3,811,483	-		AO353_17240	0.42	-0.3
3,811,483	-		AO353_17240	0.42	+0.7
3,811,483	-		AO353_17240	0.42	-1.8
3,811,483	-		AO353_17240	0.42	-0.3
3,811,483	-		AO353_17240	0.42	-2.3
3,811,483	-		AO353_17240	0.42	+0.3
3,811,483	-		AO353_17240	0.42	-0.7
3,811,528	+		AO353_17240	0.47	-0.8
3,811,529	-		AO353_17240	0.48	-0.8
3,811,529	-		AO353_17240	0.48	-0.2
3,811,555	-		AO353_17240	0.50	+0.8
3,811,646	+		AO353_17240	0.61	+0.6
3,811,646	+		AO353_17240	0.61	-0.9
3,811,646	+		AO353_17240	0.61	+0.3
3,811,647	-		AO353_17240	0.61	-1.2
3,811,756	-		AO353_17240	0.73	+0.2
3,811,940	+				-0.1
3,811,940	+				+0.3
3,812,016	+				+0.2
3,812,016	+				-0.0
3,812,017	-				+0.1
3,812,056	+				-0.2
3,812,057	-				+0.5
3,812,084	+				-0.5
3,812,084	+				+0.2
3,812,084	+				+0.7
3,812,084	+				-0.2
3,812,084	+				-1.5
3,812,084	+				+0.3
3,812,085	-				-1.0
3,812,098	+				-0.6
3,812,107	-				-1.0
3,812,151	+				-0.5
3,812,151	+				+0.0
3,812,151	+				+0.1
3,812,151	+				-0.5
3,812,211	+				+0.3
3,812,211	+				+0.3
3,812,212	-				-0.9
3,812,212	-				+1.2
3,812,355	+		AO353_17245	0.16	+0.9
3,812,355	+		AO353_17245	0.16	+0.8
3,812,355	+		AO353_17245	0.16	-2.1
3,812,355	+		AO353_17245	0.16	+1.4
3,812,355	+		AO353_17245	0.16	-0.2
3,812,356	-		AO353_17245	0.16	+0.8
3,812,356	-		AO353_17245	0.16	+0.1
3,812,356	-		AO353_17245	0.16	+2.0
3,812,356	-		AO353_17245	0.16	+1.1
3,812,403	+		AO353_17245	0.20	+0.3
3,812,403	+		AO353_17245	0.20	-0.1
3,812,403	+		AO353_17245	0.20	+1.5
3,812,404	-		AO353_17245	0.20	-0.9
3,812,404	-		AO353_17245	0.20	-0.3
3,812,404	-		AO353_17245	0.20	+0.3
3,812,404	-		AO353_17245	0.20	-0.2
3,812,445	+		AO353_17245	0.23	+0.5
3,812,457	+		AO353_17245	0.24	-0.6
3,812,457	+		AO353_17245	0.24	-0.3
3,812,458	-		AO353_17245	0.24	+1.3
3,812,458	-		AO353_17245	0.24	+0.6
3,812,458	-		AO353_17245	0.24	+0.1
3,812,458	-		AO353_17245	0.24	-0.1
3,812,458	-		AO353_17245	0.24	-0.4
3,812,458	-		AO353_17245	0.24	-1.0
3,812,458	-		AO353_17245	0.24	-1.0
3,812,458	-		AO353_17245	0.24	+1.0
3,812,541	+		AO353_17245	0.31	-1.0
3,812,541	+		AO353_17245	0.31	-0.8
3,812,541	+		AO353_17245	0.31	-0.5
3,812,541	+		AO353_17245	0.31	-0.2
3,812,541	+		AO353_17245	0.31	-1.0
3,812,541	+		AO353_17245	0.31	+0.3
3,812,541	+		AO353_17245	0.31	-0.1
3,812,541	+		AO353_17245	0.31	+0.1
3,812,542	-		AO353_17245	0.31	+1.2
3,812,542	-		AO353_17245	0.31	+0.2
3,812,542	-		AO353_17245	0.31	-0.1
3,812,542	-		AO353_17245	0.31	-0.0
3,812,542	-		AO353_17245	0.31	-2.3
3,812,542	-		AO353_17245	0.31	+1.4
3,812,559	+		AO353_17245	0.32	+0.2
3,812,559	+		AO353_17245	0.32	-0.9
3,812,634	+		AO353_17245	0.38	+0.5
3,812,634	+		AO353_17245	0.38	-1.9
3,812,634	+		AO353_17245	0.38	+0.9
3,812,634	+		AO353_17245	0.38	-1.9
3,812,634	+		AO353_17245	0.38	-0.9
3,812,635	-		AO353_17245	0.38	+1.2
3,812,635	-		AO353_17245	0.38	-2.5
3,812,635	-		AO353_17245	0.38	+0.0
3,812,635	-		AO353_17245	0.38	-1.3
3,812,635	-		AO353_17245	0.38	+0.2
3,812,698	+		AO353_17245	0.43	+0.2
3,812,698	+		AO353_17245	0.43	+0.0
3,812,699	-		AO353_17245	0.43	-1.0
3,812,699	-		AO353_17245	0.43	-0.1
3,812,699	-		AO353_17245	0.43	+0.4
3,812,712	+		AO353_17245	0.44	+0.8
3,812,712	+		AO353_17245	0.44	+0.1
3,812,712	+		AO353_17245	0.44	-0.7
3,812,712	+		AO353_17245	0.44	-0.9
3,812,712	+		AO353_17245	0.44	-0.7
3,812,712	+		AO353_17245	0.44	+1.8
3,812,713	-		AO353_17245	0.45	-1.9
3,812,713	-		AO353_17245	0.45	+0.9
3,812,713	-		AO353_17245	0.45	+0.2
3,812,713	-		AO353_17245	0.45	+1.3
3,812,713	-		AO353_17245	0.45	+0.3
3,812,713	-		AO353_17245	0.45	+0.4
3,812,713	-		AO353_17245	0.45	-0.3
3,812,713	-		AO353_17245	0.45	-0.1
3,812,713	-		AO353_17245	0.45	-0.3
3,812,772	+		AO353_17245	0.49	+0.6
3,812,772	+		AO353_17245	0.49	-1.4
3,812,772	+		AO353_17245	0.49	+1.4
3,812,773	-		AO353_17245	0.49	+0.7
3,812,867	-				+0.6
3,812,886	+		AO353_17245	0.58	+0.4
3,813,149	+		AO353_17245	0.79	+0.6
3,813,149	+		AO353_17245	0.79	+1.0
3,813,149	+		AO353_17245	0.79	-0.1
3,813,149	+		AO353_17245	0.79	+1.1
3,813,150	-		AO353_17245	0.79	-0.2
3,813,150	-		AO353_17245	0.79	+0.5
3,813,150	-		AO353_17245	0.79	-1.6
3,813,150	-		AO353_17245	0.79	+0.8
3,813,150	-		AO353_17245	0.79	-0.3
3,813,150	-		AO353_17245	0.79	+0.9
3,813,150	-		AO353_17245	0.79	+0.0
3,813,150	-		AO353_17245	0.79	-1.1
3,813,273	+		AO353_17245	0.89	-0.4
3,813,273	+		AO353_17245	0.89	-0.1
3,813,273	+		AO353_17245	0.89	+1.5
3,813,273	+		AO353_17245	0.89	-0.7
3,813,274	-		AO353_17245	0.89	+0.8
3,813,274	-		AO353_17245	0.89	+1.1
3,813,312	-				-0.2
3,813,371	+				+0.3
3,813,371	+				-0.8
3,813,371	+				-1.3
3,813,371	+				+0.8
3,813,371	+				+0.4
3,813,371	+				+0.2
3,813,371	+				+0.8
3,813,372	-				+2.0
3,813,372	-				-0.4
3,813,372	-				-0.8
3,813,372	-				-0.6
3,813,428	+				-0.6
3,813,428	+				-1.2
3,813,429	-				-1.3
3,813,429	-				+1.3
3,813,429	-				-0.4
3,813,429	-				+0.2
3,813,429	-				+0.3
3,813,429	-				+0.7
3,813,571	+				-1.1
3,813,571	+				-0.2
3,813,572	-				+0.4
3,813,572	-				+0.5
3,813,572	-				+0.6
3,813,572	-				+0.1
3,813,572	-				-0.6
3,813,572	-				-0.1
3,813,572	-				+2.2
3,813,688	+				+1.3
3,813,688	+				-0.8
3,813,693	-				+0.5
3,813,693	-				+1.0
3,813,705	+				+0.7
3,813,706	-				-0.7
3,813,741	+				+1.8
3,813,742	-				+0.6
3,813,745	-				+1.1
3,813,769	+				+0.2
3,813,830	+				-0.0
3,813,897	-				-0.7
3,814,028	+				-0.7
3,814,029	-				-0.4
3,814,029	-				-0.7
3,814,029	-				-1.1
3,814,040	+				+0.3
3,814,157	-		AO353_17250	0.48	+0.2
3,814,157	-		AO353_17250	0.48	-2.8
3,814,232	+		AO353_17250	0.78	-1.0
3,814,232	+		AO353_17250	0.78	-1.3
3,814,233	-		AO353_17250	0.78	+0.3
3,814,252	+		AO353_17250	0.85	-0.1
3,814,252	+		AO353_17250	0.85	-0.6
3,814,253	-		AO353_17250	0.86	+1.2
3,814,341	+				+0.2
3,814,342	-				-0.6
3,814,356	+				-0.1
3,814,356	+				+0.4
3,814,357	-				+0.3
3,814,357	-				-0.6
3,814,357	-				-1.1
3,814,357	-				-0.7
3,814,357	-				+0.7