Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17225

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
3,807,530	+		AO353_17220	0.32	-1.9
3,807,531	-		AO353_17220	0.32	+1.4
3,807,531	-		AO353_17220	0.32	-0.6
3,807,548	+		AO353_17220	0.33	+1.0
3,807,548	+		AO353_17220	0.33	-0.1
3,807,548	+		AO353_17220	0.33	-0.4
3,807,548	+		AO353_17220	0.33	+1.2
3,807,549	-		AO353_17220	0.33	-0.8
3,807,549	-		AO353_17220	0.33	+0.3
3,807,549	-		AO353_17220	0.33	-1.5
3,807,549	-		AO353_17220	0.33	+0.4
3,807,602	+		AO353_17220	0.37	-2.2
3,807,603	-		AO353_17220	0.37	+0.2
3,807,603	-		AO353_17220	0.37	-1.8
3,807,603	-		AO353_17220	0.37	+1.9
3,807,844	+		AO353_17220	0.56	-0.8
3,807,844	+		AO353_17220	0.56	-0.4
3,807,844	+		AO353_17220	0.56	+0.3
3,807,845	-		AO353_17220	0.56	-0.5
3,807,845	-		AO353_17220	0.56	-0.3
3,807,847	+		AO353_17220	0.56	-0.4
3,807,848	-		AO353_17220	0.56	+1.0
3,807,887	+		AO353_17220	0.59	+1.1
3,807,887	+		AO353_17220	0.59	-0.8
3,807,888	-		AO353_17220	0.59	+1.0
3,807,888	-		AO353_17220	0.59	+0.6
3,807,888	-		AO353_17220	0.59	-0.1
3,807,902	+		AO353_17220	0.60	-0.8
3,807,902	+		AO353_17220	0.60	+0.2
3,807,902	+		AO353_17220	0.60	-0.7
3,807,902	+		AO353_17220	0.60	+0.7
3,807,902	+		AO353_17220	0.60	+2.2
3,807,902	+		AO353_17220	0.60	-1.2
3,807,902	+		AO353_17220	0.60	+0.6
3,807,902	+		AO353_17220	0.60	+0.3
3,807,902	+		AO353_17220	0.60	-1.3
3,807,902	+		AO353_17220	0.60	+0.7
3,807,902	+		AO353_17220	0.60	-1.9
3,807,902	+		AO353_17220	0.60	+0.7
3,807,902	+		AO353_17220	0.60	+0.4
3,807,902	+		AO353_17220	0.60	+0.8
3,807,902	+		AO353_17220	0.60	+0.2
3,807,902	+		AO353_17220	0.60	+0.5
3,807,902	+		AO353_17220	0.60	+0.9
3,807,903	-		AO353_17220	0.60	+0.1
3,807,903	-		AO353_17220	0.60	+0.1
3,807,903	-		AO353_17220	0.60	+0.3
3,807,903	-		AO353_17220	0.60	-0.5
3,807,903	-		AO353_17220	0.60	+0.2
3,807,903	-		AO353_17220	0.60	-0.5
3,807,903	-		AO353_17220	0.60	+0.2
3,807,903	-		AO353_17220	0.60	+0.1
3,807,903	-				+1.2
3,807,903	-		AO353_17220	0.60	-0.7
3,807,903	-		AO353_17220	0.60	-0.5
3,807,903	-		AO353_17220	0.60	-0.2
3,807,903	-		AO353_17220	0.60	-2.3
3,807,903	-		AO353_17220	0.60	+0.1
3,807,903	-		AO353_17220	0.60	+0.0
3,807,903	-		AO353_17220	0.60	-0.6
3,807,903	-		AO353_17220	0.60	-0.9
3,807,903	-		AO353_17220	0.60	-0.2
3,807,903	-		AO353_17220	0.60	-1.0
3,807,903	-		AO353_17220	0.60	+0.2
3,807,903	-		AO353_17220	0.60	+0.2
3,807,904	+		AO353_17220	0.61	-0.2
3,807,904	+		AO353_17220	0.61	-0.9
3,807,904	+		AO353_17220	0.61	+1.8
3,807,904	+		AO353_17220	0.61	+0.6
3,807,904	+		AO353_17220	0.61	-0.4
3,807,914	+		AO353_17220	0.61	-1.1
3,807,914	+		AO353_17220	0.61	-1.0
3,807,914	+		AO353_17220	0.61	+0.9
3,807,914	+				+2.2
3,807,914	+		AO353_17220	0.61	-1.3
3,807,915	-		AO353_17220	0.61	+0.4
3,807,915	-		AO353_17220	0.61	+1.7
3,807,915	-		AO353_17220	0.61	-0.2
3,807,915	-		AO353_17220	0.61	+0.2
3,807,915	-		AO353_17220	0.61	-1.7
3,807,915	-		AO353_17220	0.61	-0.1
3,807,915	-		AO353_17220	0.61	-0.6
3,807,956	+		AO353_17220	0.65	-0.2
3,807,983	+		AO353_17220	0.67	+0.3
3,807,983	+		AO353_17220	0.67	-0.3
3,807,983	+		AO353_17220	0.67	+0.6
3,807,983	+		AO353_17220	0.67	+0.4
3,807,983	+		AO353_17220	0.67	-1.0
3,807,983	+		AO353_17220	0.67	-0.5
3,807,983	+		AO353_17220	0.67	+0.9
3,807,983	+		AO353_17220	0.67	-0.4
3,807,983	+		AO353_17220	0.67	+0.5
3,807,983	+		AO353_17220	0.67	+0.7
3,807,983	+		AO353_17220	0.67	-0.7
3,807,983	+		AO353_17220	0.67	-0.1
3,807,983	+		AO353_17220	0.67	-1.9
3,807,983	+		AO353_17220	0.67	-0.5
3,807,983	+		AO353_17220	0.67	-1.7
3,807,983	+		AO353_17220	0.67	-1.9
3,807,984	-		AO353_17220	0.67	+0.7
3,807,984	-		AO353_17220	0.67	-2.4
3,807,984	-		AO353_17220	0.67	+0.0
3,807,984	-		AO353_17220	0.67	-0.6
3,807,984	-		AO353_17220	0.67	+0.5
3,807,984	-		AO353_17220	0.67	+0.5
3,807,984	-		AO353_17220	0.67	+0.2
3,807,984	-		AO353_17220	0.67	+0.7
3,807,984	-		AO353_17220	0.67	-0.9
3,807,984	-		AO353_17220	0.67	+0.6
3,807,984	-		AO353_17220	0.67	-0.8
3,807,984	-		AO353_17220	0.67	+0.2
3,807,984	-		AO353_17220	0.67	-0.3
3,807,984	-		AO353_17220	0.67	-1.1
3,807,985	+		AO353_17220	0.67	-0.4
3,807,985	+		AO353_17220	0.67	+0.4
3,807,985	+		AO353_17220	0.67	+0.2
3,807,985	+		AO353_17220	0.67	-0.6
3,807,985	+		AO353_17220	0.67	+0.2
3,807,985	+		AO353_17220	0.67	+1.7
3,807,985	+		AO353_17220	0.67	+0.0
3,807,985	+		AO353_17220	0.67	-1.0
3,807,985	+		AO353_17220	0.67	+1.5
3,807,985	+		AO353_17220	0.67	-0.7
3,807,985	+		AO353_17220	0.67	+0.1
3,807,985	+		AO353_17220	0.67	-0.5
3,807,985	+		AO353_17220	0.67	+0.4
3,807,985	+		AO353_17220	0.67	+0.4
3,807,985	+		AO353_17220	0.67	+0.3
3,807,985	+		AO353_17220	0.67	+0.1
3,807,985	+		AO353_17220	0.67	-0.4
3,807,985	+		AO353_17220	0.67	+0.0
3,807,986	-		AO353_17220	0.67	-0.6
3,807,986	-		AO353_17220	0.67	+0.8
3,807,986	-		AO353_17220	0.67	-1.4
3,807,986	-		AO353_17220	0.67	-0.2
3,807,986	-		AO353_17220	0.67	+0.9
3,807,986	-		AO353_17220	0.67	-0.8
3,807,986	-		AO353_17220	0.67	+0.7
3,807,986	-		AO353_17220	0.67	+1.6
3,807,986	-		AO353_17220	0.67	+0.2
3,807,986	-		AO353_17220	0.67	-1.3
3,807,986	-		AO353_17220	0.67	-1.1
3,807,986	-		AO353_17220	0.67	+0.9
3,807,986	-		AO353_17220	0.67	+1.0
3,807,986	-		AO353_17220	0.67	-1.6
3,807,986	-		AO353_17220	0.67	-0.8
3,807,986	-		AO353_17220	0.67	-1.1
3,807,986	-		AO353_17220	0.67	-0.1
3,807,986	-		AO353_17220	0.67	+0.2
3,808,166	+		AO353_17220	0.81	-0.8
3,808,166	+		AO353_17220	0.81	-0.0
3,808,166	+		AO353_17220	0.81	+0.8
3,808,167	-		AO353_17220	0.81	-0.2
3,808,167	-		AO353_17220	0.81	+1.6
3,808,167	-		AO353_17220	0.81	+0.2
3,808,241	+		AO353_17220	0.87	+2.0
3,808,280	+		AO353_17220	0.90	+0.7
3,808,280	+		AO353_17220	0.90	-0.6
3,808,281	-		AO353_17220	0.90	+0.5
3,808,281	-		AO353_17220	0.90	-0.3
3,808,281	-		AO353_17220	0.90	+0.3
3,808,325	+				-0.5
3,808,326	-				-0.7
3,808,326	-				-0.7
3,808,331	+				-0.9
3,808,331	+				+0.3
3,808,331	+				-0.6
3,808,332	-				+1.0
3,808,332	-				-0.4
3,808,332	-				-0.2
3,808,332	-				+0.5
3,808,332	-				+0.4
3,808,332	-				+0.8
3,808,332	-				-1.6
3,808,332	-				-1.3
3,808,394	+				+0.3
3,808,395	-				+0.9
3,808,463	+				-0.7
3,808,463	+				-1.1
3,808,463	+				+1.6
3,808,463	+				-0.8
3,808,463	+				+0.1
3,808,463	+				-1.0
3,808,463	+				+0.3
3,808,464	-				+0.8
3,808,464	-				-1.5
3,808,464	-				-1.3
3,808,464	-				-0.4
3,808,464	-				-0.9
3,808,498	-				-1.4
3,808,498	-				-2.3
3,808,514	+				-1.0
3,808,515	-				-0.8
3,808,767	+		AO353_17225	0.22	+0.5
3,808,767	+		AO353_17225	0.22	-0.5
3,808,767	+		AO353_17225	0.22	-0.5
3,808,767	+		AO353_17225	0.22	-2.3
3,808,768	-		AO353_17225	0.22	+0.6
3,808,925	+		AO353_17225	0.34	+0.2
3,808,925	+		AO353_17225	0.34	+0.1
3,808,925	+		AO353_17225	0.34	-1.2
3,808,925	+		AO353_17225	0.34	+0.5
3,808,926	-		AO353_17225	0.34	-1.5
3,808,926	-		AO353_17225	0.34	-0.4
3,808,926	-		AO353_17225	0.34	-0.4
3,809,374	+		AO353_17225	0.67	-0.1
3,809,374	+		AO353_17225	0.67	-0.1
3,809,374	+		AO353_17225	0.67	+0.1
3,809,374	+		AO353_17225	0.67	+0.5
3,809,374	+		AO353_17225	0.67	+0.7
3,809,375	-		AO353_17225	0.67	-1.1
3,809,500	+		AO353_17225	0.76	-1.5
3,809,501	-		AO353_17225	0.76	-0.0
3,809,501	-		AO353_17225	0.76	+0.2
3,809,501	-		AO353_17225	0.76	+0.1
3,809,501	-		AO353_17225	0.76	+1.0
3,809,504	+		AO353_17225	0.76	-1.1
3,809,504	+		AO353_17225	0.76	-1.9
3,809,504	+		AO353_17225	0.76	-0.5
3,809,504	+		AO353_17225	0.76	-0.9
3,809,504	+		AO353_17225	0.76	-2.3
3,809,505	-		AO353_17225	0.76	+0.5
3,809,505	-		AO353_17225	0.76	+0.3
3,809,505	-		AO353_17225	0.76	-0.2
3,809,505	-		AO353_17225	0.76	-0.1
3,809,505	-		AO353_17225	0.76	+0.6
3,809,677	+		AO353_17225	0.89	+0.3
3,809,677	+		AO353_17225	0.89	+0.4
3,809,677	+		AO353_17225	0.89	+0.3
3,809,677	+		AO353_17225	0.89	+1.2
3,809,677	+		AO353_17225	0.89	-0.0
3,809,677	+		AO353_17225	0.89	-0.6
3,809,677	+		AO353_17225	0.89	+0.1
3,809,678	-		AO353_17225	0.89	-0.4
3,809,678	-		AO353_17225	0.89	+1.0
3,809,678	-		AO353_17225	0.89	-0.5
3,809,678	-		AO353_17225	0.89	-0.3
3,809,678	-		AO353_17225	0.89	-0.2
3,809,760	+				-0.5
3,809,760	+				+0.4
3,809,761	-				-0.2
3,809,848	+				+0.7
3,809,848	+				-1.2
3,809,849	-				+1.2
3,809,849	-				+0.9
3,809,849	-				+0.2
3,809,849	-				-0.3
3,809,849	-				+0.0
3,809,849	-				+0.4
3,809,849	-				-1.4
3,809,874	+				-0.4
3,809,874	+				-0.5
3,809,875	-				+0.2
3,809,875	-				-0.4
3,809,875	-				-0.5
3,809,942	+		AO353_17230	0.13	+1.2
3,809,942	+		AO353_17230	0.13	+0.8
3,809,942	+		AO353_17230	0.13	-0.7
3,809,942	+		AO353_17230	0.13	+0.6
3,809,942	+		AO353_17230	0.13	-0.7
3,809,942	+		AO353_17230	0.13	+0.9
3,809,942	+		AO353_17230	0.13	-0.5
3,809,942	+		AO353_17230	0.13	-1.6
3,809,942	+		AO353_17230	0.13	-1.2
3,809,942	+		AO353_17230	0.13	-0.3
3,809,942	+		AO353_17230	0.13	-0.4
3,809,942	+		AO353_17230	0.13	+1.2
3,809,942	+		AO353_17230	0.13	+0.4
3,809,942	+		AO353_17230	0.13	-0.2
3,809,942	+		AO353_17230	0.13	-1.1
3,809,942	+		AO353_17230	0.13	+0.6
3,809,943	-		AO353_17230	0.13	+0.6
3,809,943	-		AO353_17230	0.13	+0.0
3,809,943	-		AO353_17230	0.13	+0.2
3,809,943	-		AO353_17230	0.13	-0.6
3,809,943	-		AO353_17230	0.13	+1.1
3,809,943	-		AO353_17230	0.13	-0.1
3,809,943	-		AO353_17230	0.13	+0.0
3,809,943	-		AO353_17230	0.13	+0.6
3,809,943	-		AO353_17230	0.13	-0.8
3,809,943	-		AO353_17230	0.13	-0.6
3,809,943	-		AO353_17230	0.13	-0.3
3,809,986	+		AO353_17230	0.18	+0.2
3,810,236	+		AO353_17230	0.50	-0.4
3,810,236	+		AO353_17230	0.50	+0.5
3,810,309	-		AO353_17230	0.59	-0.2
3,810,387	+		AO353_17230	0.69	+0.4
3,810,387	+		AO353_17230	0.69	-1.6
3,810,388	-		AO353_17230	0.69	-0.4
3,810,552	+		AO353_17230	0.89	-0.5
3,810,552	+		AO353_17230	0.89	-0.2
3,810,552	+		AO353_17230	0.89	-0.3
3,810,552	+		AO353_17230	0.89	+0.4
3,810,632	+				-0.7
3,810,667	+				-0.8
3,810,667	+				-0.6
3,810,667	+				-1.8