Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16880

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
3,733,196	+		AO353_16875	0.54	-0.6
3,733,196	+		AO353_16875	0.54	-0.3
3,733,197	-		AO353_16875	0.54	+0.6
3,733,382	+		AO353_16875	0.67	-1.2
3,733,382	+		AO353_16875	0.67	-0.5
3,733,382	+		AO353_16875	0.67	+1.0
3,733,383	-		AO353_16875	0.68	-0.3
3,733,388	+		AO353_16875	0.68	+0.2
3,733,389	-		AO353_16875	0.68	+0.8
3,733,389	-		AO353_16875	0.68	-0.5
3,733,496	+		AO353_16875	0.76	+0.3
3,733,496	+		AO353_16875	0.76	+1.6
3,733,534	+		AO353_16875	0.79	+0.7
3,733,534	+		AO353_16875	0.79	+0.2
3,733,534	+		AO353_16875	0.79	+0.1
3,733,534	+		AO353_16875	0.79	+1.2
3,733,535	-		AO353_16875	0.79	+1.0
3,733,535	-		AO353_16875	0.79	-0.6
3,733,535	-		AO353_16875	0.79	-0.7
3,733,688	+				+1.1
3,733,688	+				+0.1
3,733,688	+				+0.2
3,733,688	+				-0.5
3,733,688	+				+0.4
3,733,689	-				-1.3
3,733,689	-				-2.6
3,733,706	+				+1.5
3,733,706	+				+0.9
3,733,706	+				+1.2
3,733,706	+				+1.4
3,733,707	-				+1.2
3,733,707	-				+0.3
3,733,774	+				+0.4
3,733,775	-				+1.4
3,733,775	-				+2.0
3,733,775	-				-2.0
3,733,788	+				+0.5
3,733,788	+				+0.7
3,733,789	-				+0.8
3,733,819	+				-0.5
3,733,819	+				+0.8
3,733,819	+				+0.3
3,733,820	-				+1.6
3,733,820	-				+0.0
3,733,820	-				-0.0
3,733,910	-				+0.2
3,733,938	+				-0.5
3,733,950	+				-1.2
3,733,950	+				+0.8
3,733,951	-				-2.0
3,733,951	-				-1.6
3,733,995	-				+1.1
3,734,010	-				-2.9
3,734,020	+				+0.2
3,734,020	+				-0.1
3,734,021	-				+0.4
3,734,021	-				-0.6
3,734,021	-				-1.7
3,734,026	+				+0.1
3,734,026	+				+1.6
3,734,026	+				+0.9
3,734,027	-				+0.1
3,734,027	-				-0.5
3,734,030	+				-0.1
3,734,030	+				+1.0
3,734,030	+				-0.8
3,734,031	-				-0.2
3,734,031	-				+1.2
3,734,031	-				-1.7
3,734,031	-				+1.1
3,734,102	+				+2.9
3,734,102	+				+0.2
3,734,103	-				-0.8
3,734,152	+				-1.6
3,734,152	+				-0.9
3,734,152	+				-0.6
3,734,152	+				-0.3
3,734,152	+				+0.1
3,734,152	+				-2.3
3,734,153	-				-0.1
3,734,153	-				-2.5
3,734,153	-				-1.6
3,734,164	-				+0.7
3,734,228	+				-1.8
3,734,255	+				-1.3
3,734,255	+				+0.1
3,734,255	+				-1.6
3,734,255	+				-2.3
3,734,255	+				-1.2
3,734,255	+				-0.4
3,734,256	-				-1.6
3,734,256	-				-1.3
3,734,256	-				-2.7
3,734,257	+				+0.8
3,734,258	-				-1.1
3,734,313	+				-1.1
3,734,313	+				+0.2
3,734,314	-				-1.1
3,734,369	+		AO353_16880	0.12	-2.6
3,734,369	+		AO353_16880	0.12	-2.8
3,734,369	+		AO353_16880	0.12	+0.1
3,734,369	+		AO353_16880	0.12	-2.9
3,734,369	+		AO353_16880	0.12	-2.2
3,734,369	+		AO353_16880	0.12	-1.2
3,734,369	+		AO353_16880	0.12	-0.3
3,734,369	+		AO353_16880	0.12	-1.6
3,734,370	-		AO353_16880	0.12	-0.6
3,734,370	-		AO353_16880	0.12	-1.0
3,734,370	-		AO353_16880	0.12	-1.9
3,734,370	-		AO353_16880	0.12	-2.6
3,734,370	-		AO353_16880	0.12	-1.1
3,734,370	-		AO353_16880	0.12	+0.8
3,734,370	-		AO353_16880	0.12	-0.3
3,734,370	-		AO353_16880	0.12	-1.3
3,734,370	-		AO353_16880	0.12	-2.7
3,734,370	-		AO353_16880	0.12	+1.2
3,734,513	+		AO353_16880	0.20	-1.2
3,734,718	+		AO353_16880	0.30	-2.6
3,734,718	+		AO353_16880	0.30	-1.1
3,734,719	-		AO353_16880	0.30	-1.4
3,734,719	-		AO353_16880	0.30	-1.3
3,734,735	-		AO353_16880	0.31	-1.2
3,734,735	-		AO353_16880	0.31	+0.2
3,734,735	-		AO353_16880	0.31	-2.4
3,734,784	+		AO353_16880	0.34	-1.6
3,734,784	+		AO353_16880	0.34	-2.0
3,734,784	+		AO353_16880	0.34	-2.6
3,734,784	+		AO353_16880	0.34	-0.6
3,734,785	-		AO353_16880	0.34	-2.6
3,734,785	-		AO353_16880	0.34	-0.3
3,734,785	-		AO353_16880	0.34	-2.4
3,734,785	-		AO353_16880	0.34	+0.5
3,734,785	-		AO353_16880	0.34	-1.5
3,734,811	+		AO353_16880	0.35	-1.1
3,734,811	+		AO353_16880	0.35	-0.6
3,734,811	+		AO353_16880	0.35	-2.6
3,734,811	+		AO353_16880	0.35	-0.7
3,734,811	+		AO353_16880	0.35	-1.4
3,734,811	+		AO353_16880	0.35	-1.5
3,734,811	+		AO353_16880	0.35	-1.1
3,734,812	-		AO353_16880	0.35	-0.3
3,734,812	-		AO353_16880	0.35	-2.3
3,734,867	+		AO353_16880	0.38	-2.6
3,734,867	+		AO353_16880	0.38	-2.4
3,734,867	+		AO353_16880	0.38	-1.4
3,734,867	+		AO353_16880	0.38	-0.9
3,734,867	+		AO353_16880	0.38	-1.3
3,734,867	+		AO353_16880	0.38	-1.2
3,734,867	+		AO353_16880	0.38	-0.2
3,734,868	-		AO353_16880	0.38	-0.7
3,734,868	-		AO353_16880	0.38	-0.3
3,734,868	-		AO353_16880	0.38	-2.3
3,734,868	-		AO353_16880	0.38	-1.7
3,734,868	-		AO353_16880	0.38	-0.8
3,734,868	-		AO353_16880	0.38	-1.3
3,734,868	-		AO353_16880	0.38	-0.2
3,734,948	+		AO353_16880	0.43	-2.7
3,734,948	+		AO353_16880	0.43	-0.9
3,734,948	+		AO353_16880	0.43	-1.2
3,734,948	+		AO353_16880	0.43	-1.2
3,734,949	-		AO353_16880	0.43	-4.0
3,734,949	-		AO353_16880	0.43	-1.3
3,734,949	-		AO353_16880	0.43	-1.1
3,734,949	-		AO353_16880	0.43	-1.8
3,734,949	-		AO353_16880	0.43	-0.2
3,734,949	-		AO353_16880	0.43	+0.4
3,734,949	-		AO353_16880	0.43	-0.3
3,734,995	+		AO353_16880	0.45	-2.0
3,735,005	+		AO353_16880	0.46	-1.6
3,735,005	+		AO353_16880	0.46	-1.9
3,735,005	+		AO353_16880	0.46	-2.2
3,735,005	+		AO353_16880	0.46	-2.2
3,735,006	-		AO353_16880	0.46	-0.1
3,735,006	-		AO353_16880	0.46	-2.0
3,735,131	+		AO353_16880	0.52	-0.8
3,735,131	+		AO353_16880	0.52	-0.6
3,735,131	+		AO353_16880	0.52	-1.3
3,735,132	-		AO353_16880	0.52	-2.5
3,735,146	+		AO353_16880	0.53	-2.0
3,735,146	+		AO353_16880	0.53	-1.5
3,735,146	+		AO353_16880	0.53	-1.8
3,735,146	+		AO353_16880	0.53	-3.3
3,735,146	+		AO353_16880	0.53	-1.8
3,735,147	-		AO353_16880	0.53	-2.3
3,735,147	-		AO353_16880	0.53	-0.9
3,735,147	-		AO353_16880	0.53	-1.3
3,735,147	-		AO353_16880	0.53	-0.8
3,735,147	-		AO353_16880	0.53	-1.2
3,735,147	-		AO353_16880	0.53	-1.1
3,735,147	-		AO353_16880	0.53	-0.5
3,735,147	-		AO353_16880	0.53	-1.1
3,735,185	+		AO353_16880	0.55	+0.4
3,735,185	+		AO353_16880	0.55	-0.4
3,735,185	+		AO353_16880	0.55	-1.1
3,735,186	-		AO353_16880	0.55	-0.9
3,735,186	-		AO353_16880	0.55	-1.1
3,735,186	-		AO353_16880	0.55	-0.1
3,735,186	-		AO353_16880	0.55	-0.9
3,735,186	-		AO353_16880	0.55	+1.2
3,735,273	-		AO353_16880	0.60	-1.8
3,735,273	-		AO353_16880	0.60	-1.0
3,735,310	+		AO353_16880	0.62	+1.0
3,735,311	-		AO353_16880	0.62	-2.2
3,735,404	+		AO353_16880	0.66	-1.9
3,735,404	+		AO353_16880	0.66	-2.1
3,735,404	+		AO353_16880	0.66	-2.2
3,735,405	-		AO353_16880	0.67	-0.1
3,735,405	-		AO353_16880	0.67	+0.1
3,735,421	-		AO353_16880	0.67	-2.6
3,735,421	-		AO353_16880	0.67	-0.8
3,735,565	+		AO353_16880	0.75	-0.6
3,735,565	+		AO353_16880	0.75	-1.9
3,735,565	+		AO353_16880	0.75	-1.8
3,735,565	+		AO353_16880	0.75	-2.7
3,735,565	+		AO353_16880	0.75	-3.6
3,735,566	-		AO353_16880	0.75	-1.6
3,735,566	-		AO353_16880	0.75	-1.8
3,735,566	-		AO353_16880	0.75	-1.9
3,735,566	-		AO353_16880	0.75	-0.8
3,735,707	+		AO353_16880	0.82	-1.5
3,735,707	+		AO353_16880	0.82	-1.2
3,735,708	-		AO353_16880	0.82	-0.7
3,735,758	+		AO353_16880	0.85	-1.7
3,735,758	+		AO353_16880	0.85	-4.1
3,735,758	+		AO353_16880	0.85	-0.6
3,735,759	-		AO353_16880	0.85	-1.7
3,735,759	-		AO353_16880	0.85	-1.0
3,735,774	-		AO353_16880	0.86	-0.1
3,735,799	+		AO353_16880	0.87	-3.2
3,735,800	-		AO353_16880	0.87	-1.0
3,735,800	-		AO353_16880	0.87	-1.3
3,735,878	+				-0.5
3,735,878	+				-0.7
3,735,878	+				-0.2
3,735,878	+				-2.4
3,735,879	-				-0.5
3,735,879	-				+0.2
3,735,879	-				-0.9
3,735,879	-				-0.5
3,735,879	-				-2.2
3,735,879	-				-1.8
3,735,879	-				-1.1
3,735,879	-				-1.6
3,736,024	+				-2.6
3,736,032	+				-2.5
3,736,033	-				-3.3
3,736,033	-				-2.9
3,736,033	-				-2.2
3,736,033	-				+1.2
3,736,033	-				+2.0
3,736,033	-				-1.8
3,736,033	-				-0.6
3,736,033	-				-1.8
3,736,033	-				-1.8
3,736,040	+				-0.1
3,736,040	+				-0.0
3,736,040	+				+0.7
3,736,040	+				+0.2
3,736,040	+				-0.3
3,736,040	+				-1.8
3,736,040	+				-0.1
3,736,040	+				-0.1
3,736,040	+				-0.3
3,736,040	+				-1.6
3,736,041	-				+0.4
3,736,041	-				+1.1
3,736,041	-				-0.8
3,736,041	-				+0.2
3,736,041	-				+0.4
3,736,103	+				-0.5
3,736,103	+				+0.8
3,736,103	+				-0.2
3,736,103	+				+0.2
3,736,103	+				-0.7
3,736,103	+				+1.2
3,736,103	+				-0.1
3,736,103	+				+0.8
3,736,104	-				-0.2
3,736,104	-				-0.4
3,736,104	-				-0.5
3,736,104	-				+0.4
3,736,171	+		AO353_16885	0.21	+0.4
3,736,171	+		AO353_16885	0.21	+0.4
3,736,172	-		AO353_16885	0.21	-0.1
3,736,172	-		AO353_16885	0.21	-0.5
3,736,172	-		AO353_16885	0.21	-0.0
3,736,211	+		AO353_16885	0.33	+0.9
3,736,211	+		AO353_16885	0.33	+0.1
3,736,212	-		AO353_16885	0.34	-0.4
3,736,212	-		AO353_16885	0.34	-0.4
3,736,345	+		AO353_16885	0.74	+1.1
3,736,345	+		AO353_16885	0.74	-0.8
3,736,346	-		AO353_16885	0.75	-0.2
3,736,364	+		AO353_16885	0.80	+0.5
3,736,364	+		AO353_16885	0.80	+0.4
3,736,364	+		AO353_16885	0.80	-0.2
3,736,364	+		AO353_16885	0.80	-1.0
3,736,364	+		AO353_16885	0.80	-1.6
3,736,365	-		AO353_16885	0.80	+0.4
3,736,365	-		AO353_16885	0.80	+0.4
3,736,365	-		AO353_16885	0.80	+1.0
3,736,365	-		AO353_16885	0.80	-0.7
3,736,434	+				-0.8
3,736,434	+				-0.8
3,736,434	+				+1.7
3,736,434	+				+0.1
3,736,435	-				-0.2
3,736,435	-				-1.8
3,736,490	+				-0.9
3,736,490	+				-1.5
3,736,491	-				+0.6
3,736,515	+				+4.3
3,736,515	+				-0.8
3,736,516	-				+0.1
3,736,516	-				-0.0
3,736,557	+				-0.8
3,736,557	+				-0.9
3,736,577	-				-0.3
3,736,670	-				+1.0
3,736,670	-				-1.1
3,736,733	+				-0.0
3,736,785	+				-0.1
3,736,786	-				+1.1
3,736,803	+				+1.4
3,736,803	+				+0.1
3,736,803	+				-1.3
3,736,804	-				+0.3
3,736,804	-				+0.2
3,736,804	-				-0.4
3,736,832	+				+0.9
3,736,833	-				+1.1
3,736,929	-				+0.8