Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16835

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
3,725,709	+		AO353_16830	0.15	-0.6
3,725,709	+		AO353_16830	0.15	+0.3
3,725,709	+		AO353_16830	0.15	+0.9
3,725,709	+		AO353_16830	0.15	+0.5
3,725,709	+		AO353_16830	0.15	+1.5
3,725,709	+		AO353_16830	0.15	+0.6
3,725,709	+		AO353_16830	0.15	+0.6
3,725,710	-		AO353_16830	0.15	+0.0
3,725,710	-		AO353_16830	0.15	-1.0
3,725,710	-		AO353_16830	0.15	-1.2
3,725,710	-		AO353_16830	0.15	+1.2
3,725,710	-		AO353_16830	0.15	+1.4
3,725,710	-		AO353_16830	0.15	-0.1
3,725,710	-		AO353_16830	0.15	-0.9
3,725,710	-		AO353_16830	0.15	+0.0
3,725,710	-		AO353_16830	0.15	-1.1
3,725,738	+		AO353_16830	0.19	-0.5
3,725,738	+		AO353_16830	0.19	+3.0
3,725,738	+		AO353_16830	0.19	+1.0
3,725,738	+		AO353_16830	0.19	+1.1
3,725,738	+		AO353_16830	0.19	-0.2
3,725,738	+		AO353_16830	0.19	-0.3
3,725,738	+		AO353_16830	0.19	-0.6
3,725,738	+		AO353_16830	0.19	+2.0
3,725,738	+		AO353_16830	0.19	+1.1
3,725,738	+		AO353_16830	0.19	+0.8
3,725,739	-		AO353_16830	0.19	+0.1
3,725,739	-		AO353_16830	0.19	+4.2
3,725,739	-		AO353_16830	0.19	-0.5
3,725,739	-		AO353_16830	0.19	+2.7
3,725,739	-		AO353_16830	0.19	+0.3
3,725,739	-		AO353_16830	0.19	+0.4
3,725,739	-		AO353_16830	0.19	+0.7
3,725,742	+		AO353_16830	0.20	+1.3
3,725,742	+		AO353_16830	0.20	+0.7
3,725,742	+		AO353_16830	0.20	+0.7
3,725,742	+		AO353_16830	0.20	-0.1
3,725,742	+		AO353_16830	0.20	+2.0
3,725,742	+		AO353_16830	0.20	-0.4
3,725,742	+		AO353_16830	0.20	+0.5
3,725,742	+		AO353_16830	0.20	-0.9
3,725,742	+		AO353_16830	0.20	+1.1
3,725,742	+		AO353_16830	0.20	+0.5
3,725,742	+		AO353_16830	0.20	+0.2
3,725,742	+		AO353_16830	0.20	+0.9
3,725,742	+		AO353_16830	0.20	+0.4
3,725,742	+		AO353_16830	0.20	-0.3
3,725,742	+		AO353_16830	0.20	+0.1
3,725,743	-		AO353_16830	0.20	-0.5
3,725,743	-		AO353_16830	0.20	-0.2
3,725,743	-		AO353_16830	0.20	+0.2
3,725,743	-		AO353_16830	0.20	+1.4
3,725,743	-		AO353_16830	0.20	+1.1
3,725,743	-		AO353_16830	0.20	+0.1
3,725,743	-		AO353_16830	0.20	-0.9
3,725,743	-		AO353_16830	0.20	+1.5
3,725,743	-		AO353_16830	0.20	+0.2
3,725,743	-		AO353_16830	0.20	-0.8
3,725,743	-		AO353_16830	0.20	+0.5
3,725,743	-		AO353_16830	0.20	+0.3
3,725,743	-		AO353_16830	0.20	+1.6
3,725,743	-		AO353_16830	0.20	-0.5
3,725,743	-		AO353_16830	0.20	+1.0
3,725,743	-		AO353_16830	0.20	-0.6
3,725,743	-		AO353_16830	0.20	+0.1
3,725,743	-		AO353_16830	0.20	+0.9
3,725,853	+		AO353_16830	0.34	-0.8
3,725,854	-		AO353_16830	0.34	+1.1
3,725,854	-		AO353_16830	0.34	-2.0
3,725,865	+		AO353_16830	0.36	-0.1
3,725,865	+		AO353_16830	0.36	+0.6
3,725,865	+		AO353_16830	0.36	+1.1
3,725,866	-		AO353_16830	0.36	-1.4
3,725,866	-		AO353_16830	0.36	+0.1
3,725,866	-		AO353_16830	0.36	+1.3
3,725,866	-		AO353_16830	0.36	+0.5
3,725,866	-		AO353_16830	0.36	-0.5
3,725,866	-		AO353_16830	0.36	+0.1
3,725,866	-		AO353_16830	0.36	-1.2
3,725,932	+		AO353_16830	0.45	+0.7
3,725,932	+		AO353_16830	0.45	+0.3
3,725,932	+		AO353_16830	0.45	-1.1
3,725,932	+		AO353_16830	0.45	-0.5
3,725,933	-		AO353_16830	0.45	+0.7
3,725,933	-		AO353_16830	0.45	-1.6
3,725,953	+		AO353_16830	0.47	-0.0
3,725,953	+		AO353_16830	0.47	-1.2
3,725,953	+		AO353_16830	0.47	+0.5
3,725,953	+		AO353_16830	0.47	-0.9
3,725,953	+		AO353_16830	0.47	+0.2
3,725,954	-		AO353_16830	0.48	-1.1
3,725,954	-		AO353_16830	0.48	-0.1
3,725,954	-		AO353_16830	0.48	-1.0
3,726,070	+		AO353_16830	0.63	-0.3
3,726,071	-		AO353_16830	0.63	+0.5
3,726,203	+		AO353_16830	0.80	-1.2
3,726,203	+		AO353_16830	0.80	+0.2
3,726,203	+		AO353_16830	0.80	-1.0
3,726,203	+		AO353_16830	0.80	+0.7
3,726,203	+		AO353_16830	0.80	-0.8
3,726,204	-		AO353_16830	0.81	+0.9
3,726,204	-		AO353_16830	0.81	-0.5
3,726,204	-		AO353_16830	0.81	-1.3
3,726,229	+		AO353_16830	0.84	-0.4
3,726,229	+		AO353_16830	0.84	-0.0
3,726,229	+		AO353_16830	0.84	-0.1
3,726,230	-		AO353_16830	0.84	+1.2
3,726,230	-		AO353_16830	0.84	+0.2
3,726,230	-		AO353_16830	0.84	+0.4
3,726,230	-		AO353_16830	0.84	+0.7
3,726,253	+		AO353_16830	0.87	-0.3
3,726,253	+		AO353_16830	0.87	-0.8
3,726,253	+		AO353_16830	0.87	-0.6
3,726,253	+		AO353_16830	0.87	+1.4
3,726,253	+		AO353_16830	0.87	+0.2
3,726,254	-		AO353_16830	0.87	+1.4
3,726,254	-		AO353_16830	0.87	+0.5
3,726,254	-		AO353_16830	0.87	+1.2
3,726,254	-		AO353_16830	0.87	+0.5
3,726,254	-		AO353_16830	0.87	-0.3
3,726,254	-		AO353_16830	0.87	+0.4
3,726,254	-		AO353_16830	0.87	-0.5
3,726,303	+				-1.7
3,726,429	+				+1.0
3,726,461	-				+0.0
3,726,509	+				+1.8
3,726,509	+				-0.2
3,726,510	-				-1.1
3,726,510	-				+0.8
3,726,528	+				-0.4
3,726,529	-				+0.4
3,726,554	+				-0.3
3,726,555	-				-0.7
3,726,586	+				-0.2
3,726,586	+				-0.5
3,726,586	+				-1.4
3,726,586	+				-2.5
3,726,586	+				-1.2
3,726,586	+				-1.5
3,726,586	+				-2.2
3,726,587	-				-2.8
3,726,587	-				-2.1
3,726,587	-				-1.5
3,726,587	-				-2.5
3,726,587	-				-1.2
3,726,587	-				-1.1
3,726,805	+		AO353_16835	0.35	-1.0
3,727,055	+		AO353_16835	0.73	-1.5
3,727,055	+		AO353_16835	0.73	-0.0
3,727,100	-		AO353_16835	0.80	-1.5
3,727,251	+				+1.6
3,727,266	+				-0.1
3,727,267	-				-2.6
3,727,267	-				-1.6
3,727,275	+				+0.6
3,727,297	+				-0.2
3,727,297	+				+0.1
3,727,297	+				-0.5
3,727,298	-				+0.8
3,727,298	-				+1.7
3,727,298	-				+0.4
3,727,302	+				-0.8
3,727,302	+				+0.4
3,727,302	+				-1.0
3,727,302	+				+0.0
3,727,302	+				-1.2
3,727,302	+				-1.6
3,727,302	+				+0.8
3,727,302	+				+0.5
3,727,302	+				-0.1
3,727,302	+				-0.7
3,727,302	+				+0.0
3,727,302	+				-0.5
3,727,302	+				-0.0
3,727,302	+				-1.1
3,727,302	+				-1.1
3,727,302	+				+0.2
3,727,302	+				+0.2
3,727,302	+				+1.0
3,727,302	+				+1.0
3,727,303	-				-0.2
3,727,303	-				-0.1
3,727,303	-				-0.8
3,727,303	-				-1.6
3,727,303	-				+0.7
3,727,616	+		AO353_16840	0.86	+0.2
3,727,617	-		AO353_16840	0.87	-1.7
3,727,617	-		AO353_16840	0.87	-0.1
3,727,664	-				+0.1
3,727,759	+		AO353_16845	0.10	-0.9
3,727,759	+		AO353_16845	0.10	+0.2
3,727,759	+		AO353_16845	0.10	-1.1
3,727,759	+		AO353_16845	0.10	-0.4
3,727,759	+		AO353_16845	0.10	-0.6
3,727,759	+		AO353_16845	0.10	+0.1
3,727,759	+		AO353_16845	0.10	-0.9
3,727,760	-		AO353_16845	0.11	-2.3
3,727,760	-		AO353_16845	0.11	-0.3
3,727,769	+		AO353_16845	0.12	-1.3
3,727,770	-		AO353_16845	0.12	+0.1
3,727,783	+		AO353_16845	0.13	-1.0
3,727,783	+		AO353_16845	0.13	-0.6
3,727,869	+		AO353_16845	0.22	-1.5
3,727,869	+		AO353_16845	0.22	-1.3
3,727,870	-		AO353_16845	0.22	-1.5
3,727,871	+		AO353_16845	0.23	+0.4
3,727,871	+		AO353_16845	0.23	-2.8
3,727,871	+		AO353_16845	0.23	+0.1
3,727,871	+		AO353_16845	0.23	+0.0
3,727,871	+		AO353_16845	0.23	+1.8
3,727,871	+		AO353_16845	0.23	-0.9
3,727,871	+		AO353_16845	0.23	+0.2
3,727,871	+		AO353_16845	0.23	-0.7
3,727,871	+		AO353_16845	0.23	-1.8
3,727,871	+		AO353_16845	0.23	-1.5
3,727,871	+		AO353_16845	0.23	+0.8
3,727,871	+		AO353_16845	0.23	-2.2
3,727,871	+		AO353_16845	0.23	+0.9
3,727,872	-		AO353_16845	0.23	-2.2
3,727,872	-		AO353_16845	0.23	+0.5
3,727,872	-		AO353_16845	0.23	-0.4
3,727,872	-		AO353_16845	0.23	-0.2
3,727,872	-		AO353_16845	0.23	+0.2
3,727,872	-		AO353_16845	0.23	-0.1
3,727,872	-		AO353_16845	0.23	-0.4
3,727,872	-		AO353_16845	0.23	-1.1
3,727,872	-		AO353_16845	0.23	-0.8
3,727,872	-		AO353_16845	0.23	-0.3
3,727,872	-		AO353_16845	0.23	-1.9
3,727,872	-		AO353_16845	0.23	-0.1
3,727,872	-		AO353_16845	0.23	-0.7
3,727,872	-		AO353_16845	0.23	-0.6
3,727,940	+		AO353_16845	0.30	-1.3
3,727,941	-		AO353_16845	0.30	-1.9
3,727,941	-		AO353_16845	0.30	-0.5
3,728,118	+		AO353_16845	0.49	-0.6
3,728,118	+		AO353_16845	0.49	-0.6
3,728,118	+		AO353_16845	0.49	-0.3
3,728,118	+		AO353_16845	0.49	-0.1
3,728,118	+		AO353_16845	0.49	+0.8
3,728,119	-		AO353_16845	0.49	-1.6
3,728,119	-		AO353_16845	0.49	-2.8
3,728,119	-		AO353_16845	0.49	+0.4
3,728,119	-		AO353_16845	0.49	-1.9
3,728,155	-		AO353_16845	0.53	-2.4
3,728,173	+		AO353_16845	0.55	-0.2