Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12165

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
2,669,607	+		AO353_12155	0.46	+0.4
2,669,713	-		AO353_12155	0.63	+1.0
2,669,728	+		AO353_12155	0.66	-0.8
2,669,728	+		AO353_12155	0.66	+0.8
2,669,775	+		AO353_12155	0.73	+0.7
2,669,807	+		AO353_12155	0.79	-0.6
2,669,807	+		AO353_12155	0.79	+0.7
2,669,807	+		AO353_12155	0.79	-1.1
2,669,807	+		AO353_12155	0.79	-0.6
2,669,807	+		AO353_12155	0.79	+0.7
2,669,808	-		AO353_12155	0.79	+0.8
2,669,808	-		AO353_12155	0.79	+0.7
2,669,887	+				-1.3
2,669,887	+				-0.0
2,669,887	+				+1.5
2,669,887	+				-1.6
2,669,887	+				+0.6
2,669,887	+				+0.9
2,669,888	-				+0.8
2,669,888	-				+0.7
2,669,888	-				+0.1
2,669,888	-				-0.2
2,669,888	-				+0.6
2,669,888	-				-0.4
2,669,888	-				+0.6
2,669,888	-				+0.7
2,669,888	-				-0.4
2,669,888	-				-0.3
2,669,893	+				-1.0
2,669,893	+				-0.2
2,669,893	+				-2.4
2,669,893	+				-0.2
2,669,893	+				+0.7
2,669,893	+				-0.3
2,669,894	-				+0.4
2,669,894	-				-0.5
2,669,894	-				+0.6
2,669,894	-				-0.8
2,669,894	-				+0.5
2,669,894	-				+0.2
2,669,894	-				-0.9
2,669,894	-				+1.1
2,669,894	-				+2.3
2,669,894	-				+0.4
2,669,894	-				+1.4
2,669,943	+				+0.1
2,669,966	+				+0.5
2,670,103	-		AO353_12160	0.29	+0.5
2,670,127	+		AO353_12160	0.34	-0.9
2,670,127	+		AO353_12160	0.34	-0.2
2,670,127	+		AO353_12160	0.34	-0.4
2,670,127	+		AO353_12160	0.34	+0.0
2,670,127	+		AO353_12160	0.34	-0.0
2,670,127	+		AO353_12160	0.34	-0.1
2,670,127	+		AO353_12160	0.34	+0.4
2,670,127	+		AO353_12160	0.34	-0.6
2,670,128	-		AO353_12160	0.34	-0.2
2,670,128	-		AO353_12160	0.34	-0.0
2,670,128	-		AO353_12160	0.34	+1.1
2,670,128	-		AO353_12160	0.34	+0.4
2,670,128	-		AO353_12160	0.34	-1.1
2,670,128	-		AO353_12160	0.34	+1.0
2,670,128	-		AO353_12160	0.34	-0.5
2,670,128	-		AO353_12160	0.34	-0.2
2,670,128	-		AO353_12160	0.34	-0.3
2,670,128	-		AO353_12160	0.34	+0.1
2,670,131	+		AO353_12160	0.35	+0.3
2,670,131	+		AO353_12160	0.35	-0.4
2,670,131	+		AO353_12160	0.35	-0.1
2,670,131	+		AO353_12160	0.35	-0.3
2,670,131	+		AO353_12160	0.35	-0.8
2,670,131	+		AO353_12160	0.35	-0.9
2,670,131	+		AO353_12160	0.35	-0.4
2,670,131	+		AO353_12160	0.35	+2.3
2,670,132	-		AO353_12160	0.35	-0.1
2,670,132	-		AO353_12160	0.35	-0.9
2,670,132	-		AO353_12160	0.35	-0.7
2,670,132	-		AO353_12160	0.35	+1.3
2,670,132	-		AO353_12160	0.35	-0.7
2,670,132	-		AO353_12160	0.35	+0.1
2,670,132	-		AO353_12160	0.35	+0.2
2,670,132	-		AO353_12160	0.35	-0.1
2,670,132	-		AO353_12160	0.35	-0.8
2,670,132	-		AO353_12160	0.35	-1.6
2,670,132	-		AO353_12160	0.35	-1.1
2,670,132	-		AO353_12160	0.35	+0.4
2,670,240	+		AO353_12160	0.56	+0.2
2,670,240	+		AO353_12160	0.56	-0.6
2,670,240	+		AO353_12160	0.56	-0.6
2,670,240	+		AO353_12160	0.56	-0.8
2,670,240	+		AO353_12160	0.56	+0.2
2,670,240	+		AO353_12160	0.56	+0.4
2,670,240	+		AO353_12160	0.56	+0.8
2,670,241	-		AO353_12160	0.57	-1.3
2,670,241	-		AO353_12160	0.57	+0.6
2,670,307	+		AO353_12160	0.70	+1.9
2,670,307	+		AO353_12160	0.70	-0.0
2,670,307	+		AO353_12160	0.70	-0.8
2,670,307	+		AO353_12160	0.70	+1.5
2,670,308	-		AO353_12160	0.70	-0.3
2,670,308	-		AO353_12160	0.70	+1.8
2,670,308	-		AO353_12160	0.70	+0.4
2,670,308	-		AO353_12160	0.70	+0.3
2,670,308	-		AO353_12160	0.70	+0.3
2,670,308	-		AO353_12160	0.70	+1.1
2,670,308	-		AO353_12160	0.70	-0.4
2,670,308	-		AO353_12160	0.70	-2.0
2,670,308	-		AO353_12160	0.70	+0.2
2,670,367	-		AO353_12160	0.81	-0.9
2,670,367	-		AO353_12160	0.81	+0.8
2,670,367	-		AO353_12160	0.81	-0.1
2,670,373	+		AO353_12160	0.83	+0.9
2,670,399	+		AO353_12160	0.88	+0.1
2,670,400	-		AO353_12160	0.88	+0.0
2,670,400	-		AO353_12160	0.88	-1.0
2,670,474	+				+0.4
2,670,499	+				-0.6
2,670,499	+				-0.7
2,670,499	+				+0.9
2,670,500	-				-0.5
2,670,500	-				+0.6
2,670,500	-				+1.3
2,670,510	+				-0.7
2,670,510	+				+0.1
2,670,510	+				+2.3
2,670,510	+				+0.1
2,670,510	+				-1.3
2,670,510	+				-0.9
2,670,511	-				+0.3
2,670,511	-				-0.9
2,670,511	-				-0.3
2,670,511	-				+0.4
2,670,511	-				-0.8
2,670,554	+				-0.5
2,670,554	+				-1.0
2,670,554	+				-0.1
2,670,554	+				-0.7
2,670,554	+				+1.1
2,670,554	+				-0.4
2,670,554	+				+1.2
2,670,554	+				+0.5
2,670,554	+				+0.5
2,670,555	-				-1.0
2,670,555	-				+0.9
2,670,555	-				+0.3
2,670,555	-				+0.7
2,670,578	+				+0.2
2,670,614	-				+0.3
2,670,654	+		AO353_12165	0.13	+0.1
2,670,654	+		AO353_12165	0.13	-0.3
2,670,654	+		AO353_12165	0.13	-1.8
2,670,841	+		AO353_12165	0.46	+0.1
2,670,841	+		AO353_12165	0.46	-0.7
2,670,842	-		AO353_12165	0.46	-0.5
2,670,900	+		AO353_12165	0.56	+1.1
2,670,900	+		AO353_12165	0.56	-1.1
2,670,900	+		AO353_12165	0.56	-2.1
2,670,900	+		AO353_12165	0.56	+0.6
2,670,900	+		AO353_12165	0.56	-0.1
2,670,900	+		AO353_12165	0.56	+1.2
2,670,900	+		AO353_12165	0.56	+0.2
2,670,901	-		AO353_12165	0.56	+0.6
2,670,901	-		AO353_12165	0.56	+0.8
2,670,901	-		AO353_12165	0.56	-0.5
2,670,901	-		AO353_12165	0.56	+1.5
2,670,902	+		AO353_12165	0.56	+0.0
2,670,902	+		AO353_12165	0.56	+0.8
2,670,903	-		AO353_12165	0.56	-1.2
2,670,903	-		AO353_12165	0.56	-0.2
2,670,905	+		AO353_12165	0.57	+1.6
2,670,905	+		AO353_12165	0.57	-0.7
2,670,905	+		AO353_12165	0.57	+1.6
2,670,906	-		AO353_12165	0.57	+0.3
2,670,921	+		AO353_12165	0.59	-1.7
2,670,921	+		AO353_12165	0.59	-0.9
2,670,921	+		AO353_12165	0.59	-0.3
2,670,922	-		AO353_12165	0.60	-0.4
2,670,922	-		AO353_12165	0.60	+0.4
2,671,147	+				+0.1
2,671,147	+				-0.7
2,671,147	+				-0.0
2,671,147	+				+1.0
2,671,147	+				-0.3
2,671,147	+				-1.2
2,671,147	+				+0.6
2,671,147	+				+1.1
2,671,147	+				-0.6
2,671,147	+				-1.3
2,671,147	+				-1.9
2,671,148	-				+0.7
2,671,148	-				-0.7
2,671,148	-				-0.2
2,671,148	-				+0.7
2,671,148	-				-0.0
2,671,148	-				-0.5
2,671,151	+				+0.1
2,671,151	+				+0.9
2,671,151	+				+0.3
2,671,151	+				+0.5
2,671,151	+				+0.3
2,671,151	+				+1.0
2,671,151	+				+1.4
2,671,151	+				+0.3
2,671,151	+				-0.6
2,671,151	+				+0.6
2,671,152	-				+0.9
2,671,152	-				-0.1
2,671,152	-				+0.2
2,671,152	-				+0.2
2,671,152	-				-1.9
2,671,152	-				-0.9
2,671,152	-				+1.1
2,671,152	-				-0.3
2,671,152	-				-0.7
2,671,195	+				+0.7
2,671,195	+				-0.3
2,671,195	+				+0.7
2,671,195	+				-0.1
2,671,195	+				+1.3
2,671,195	+				+0.3
2,671,195	+				-0.9
2,671,195	+				+0.4
2,671,196	-				-0.3
2,671,196	-				-1.2
2,671,196	-				+0.6
2,671,196	-				-0.3
2,671,196	-				+0.3
2,671,196	-				-0.9
2,671,197	+				+0.1
2,671,198	-				-0.2
2,671,198	-				-1.5
2,671,203	+				-0.7
2,671,203	+				-1.0
2,671,203	+				+0.6
2,671,203	+				-2.8
2,671,203	+				+0.4
2,671,203	+				-0.3
2,671,203	+				+1.1
2,671,203	+				-0.6
2,671,204	-				+0.8
2,671,204	-				+1.3
2,671,204	-				+0.8
2,671,204	-				+0.6
2,671,212	+				+1.0
2,671,213	-				-0.8
2,671,213	-				+0.8
2,671,213	-				-0.8
2,671,215	+				-0.2
2,671,215	+				-2.2
2,671,215	+				-1.2
2,671,215	+				+0.8
2,671,215	+				+0.9
2,671,215	+				+0.7
2,671,215	+				+0.5
2,671,215	+				+0.6
2,671,215	+				+1.7
2,671,215	+				-0.5
2,671,216	-				-1.4
2,671,216	-				+0.8
2,671,216	-				+0.9
2,671,216	-				-1.1
2,671,216	-				-0.7
2,671,216	-				+0.3
2,671,216	-				+1.3
2,671,216	-				+0.7
2,671,216	-				-0.1
2,671,216	-				-0.2
2,671,216	-				+0.1
2,671,216	-				+1.3
2,671,216	-				+1.3
2,671,216	-				+0.2