Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11090

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
2,421,480	+		AO353_11080	0.55	-1.3
2,421,481	-		AO353_11080	0.55	-2.1
2,421,593	+		AO353_11080	0.63	-1.9
2,421,593	+		AO353_11080	0.63	-0.7
2,421,593	+		AO353_11080	0.63	-2.3
2,421,594	-		AO353_11080	0.63	-1.9
2,421,594	-		AO353_11080	0.63	-0.5
2,421,594	-		AO353_11080	0.63	+1.6
2,421,594	-		AO353_11080	0.63	-2.1
2,421,612	+		AO353_11080	0.64	-0.1
2,421,613	-		AO353_11080	0.64	-2.3
2,421,643	+		AO353_11080	0.66	-2.3
2,421,643	+		AO353_11080	0.66	-1.5
2,421,643	+		AO353_11080	0.66	-1.0
2,421,643	+		AO353_11080	0.66	+1.6
2,421,643	+		AO353_11080	0.66	-1.0
2,421,643	+		AO353_11080	0.66	+0.4
2,421,643	+		AO353_11080	0.66	-1.2
2,421,643	+		AO353_11080	0.66	+0.5
2,421,644	-		AO353_11080	0.66	-2.3
2,421,644	-		AO353_11080	0.66	-2.2
2,421,644	-		AO353_11080	0.66	-0.7
2,421,644	-		AO353_11080	0.66	-0.9
2,421,932	-		AO353_11080	0.86	-0.2
2,422,021	+				+0.5
2,422,022	-				-0.3
2,422,022	-				-1.5
2,422,099	+				-2.3
2,422,099	+				+1.0
2,422,099	+				-1.4
2,422,099	+				-1.3
2,422,099	+				-0.7
2,422,099	+				-1.3
2,422,100	-				+0.3
2,422,100	-				-3.2
2,422,100	-				-0.3
2,422,100	-				-0.8
2,422,100	-				+0.3
2,422,100	-				-0.1
2,422,100	-				-1.7
2,422,100	-				-1.6
2,422,100	-				-1.7
2,422,128	+				-1.6
2,422,128	+				-2.6
2,422,128	+				-2.7
2,422,128	+				-1.7
2,422,129	-				-0.4
2,422,129	-				-1.0
2,422,129	-				-2.1
2,422,129	-				+0.6
2,422,129	-				-0.1
2,422,129	-				-0.3
2,422,364	-		AO353_11085	0.73	-2.6
2,422,364	-		AO353_11085	0.73	-1.9
2,422,364	-		AO353_11085	0.73	-0.8
2,422,384	-		AO353_11085	0.79	-0.9
2,422,392	+		AO353_11085	0.82	+1.2
2,422,392	+		AO353_11085	0.82	+1.4
2,422,392	+		AO353_11085	0.82	-0.3
2,422,392	+		AO353_11085	0.82	-0.7
2,422,392	+		AO353_11085	0.82	-0.3
2,422,393	-		AO353_11085	0.82	+0.8
2,422,393	-		AO353_11085	0.82	+0.3
2,422,393	-		AO353_11085	0.82	-1.2
2,422,393	-		AO353_11085	0.82	-1.3
2,422,393	-		AO353_11085	0.82	-0.4
2,422,393	-		AO353_11085	0.82	-1.2
2,422,393	-		AO353_11085	0.82	+0.2
2,422,393	-		AO353_11085	0.82	-1.9
2,422,393	-		AO353_11085	0.82	-0.9
2,422,422	+				-3.1
2,422,422	+				-0.2
2,422,422	+				-1.0
2,422,422	+				-1.9
2,422,422	+				-1.7
2,422,422	+				-2.0
2,422,422	+				-0.7
2,422,422	+				-1.4
2,422,422	+				-2.5
2,422,422	+				-1.4
2,422,422	+				+1.2
2,422,422	+				+0.3
2,422,422	+				-1.8
2,422,422	+				-2.3
2,422,422	+				-1.1
2,422,422	+				-0.7
2,422,422	+				-0.7
2,422,422	+				-1.9
2,422,423	-				+0.8
2,422,423	-				-2.1
2,422,423	-				-2.5
2,422,423	-				-1.0
2,422,423	-				-1.8
2,422,423	-				-0.2
2,422,423	-				-0.3
2,422,423	-				+0.8
2,422,423	-				-3.1
2,422,423	-				-1.5
2,422,423	-				-1.4
2,422,423	-				-2.0
2,422,423	-				-1.8
2,422,423	-				+0.4
2,422,423	-				-0.1
2,422,423	-				-1.2
2,422,423	-				-0.5
2,422,438	+				-0.4
2,422,438	+				-2.0
2,422,438	+				-1.2
2,422,438	+				+0.8
2,422,438	+				-1.7
2,422,438	+				-1.7
2,422,438	+				-2.3
2,422,438	+				-1.0
2,422,438	+				-0.9
2,422,438	+				+1.0
2,422,438	+				-1.2
2,422,438	+				-0.8
2,422,438	+				-1.0
2,422,438	+				-1.5
2,422,438	+				-1.2
2,422,438	+				+1.2
2,422,438	+				-0.0
2,422,439	-				+0.5
2,422,439	-				-1.5
2,422,439	-				+0.8
2,422,439	-				-0.4
2,422,439	-				+1.0
2,422,439	-				+0.3
2,422,439	-				-2.0
2,422,439	-				-0.3
2,422,439	-				-0.2
2,422,439	-				-1.1
2,422,439	-				-1.4
2,422,439	-				-1.1
2,422,439	-				-0.4
2,422,439	-				-0.0
2,422,439	-				-0.2
2,422,467	+				+0.1
2,422,467	+				-1.7
2,422,468	-				-1.7
2,422,468	-				-1.1
2,422,468	-				+1.1
2,422,532	+				-0.0
2,422,532	+				-0.5
2,422,532	+				-1.9
2,422,533	-				-1.8
2,422,533	-				-2.0
2,422,533	-				-1.1
2,422,533	-				+0.5
2,422,533	-				-2.1
2,422,533	-				-1.3
2,422,533	-				-1.3
2,422,533	-				-1.4
2,422,533	-				-0.5
2,422,599	+		AO353_11090	0.12	-0.2
2,422,600	-		AO353_11090	0.12	-1.4
2,422,888	+		AO353_11090	0.38	-0.9
2,422,889	-		AO353_11090	0.38	-0.5
2,422,900	-		AO353_11090	0.39	-1.6
2,423,145	+		AO353_11090	0.61	+0.5
2,423,146	-		AO353_11090	0.61	-0.5
2,423,148	+		AO353_11090	0.61	-1.3
2,423,148	+		AO353_11090	0.61	+0.9
2,423,149	-		AO353_11090	0.61	-1.6
2,423,149	-		AO353_11090	0.61	-0.7
2,423,149	-		AO353_11090	0.61	-0.9
2,423,165	+		AO353_11090	0.62	-2.0
2,423,165	+		AO353_11090	0.62	-0.6
2,423,173	+		AO353_11090	0.63	-0.7
2,423,173	+		AO353_11090	0.63	-1.0
2,423,173	+		AO353_11090	0.63	-1.0
2,423,173	+		AO353_11090	0.63	-0.9
2,423,173	+		AO353_11090	0.63	-0.4
2,423,173	+		AO353_11090	0.63	-0.6
2,423,174	-		AO353_11090	0.63	-0.1
2,423,174	-		AO353_11090	0.63	-2.0
2,423,174	-		AO353_11090	0.63	-0.0
2,423,174	-		AO353_11090	0.63	+0.3
2,423,175	+		AO353_11090	0.63	-1.9
2,423,175	+		AO353_11090	0.63	-0.7
2,423,175	+		AO353_11090	0.63	-0.5
2,423,176	-		AO353_11090	0.63	-0.0
2,423,176	-		AO353_11090	0.63	-0.5
2,423,176	-		AO353_11090	0.63	-1.3
2,423,439	+		AO353_11090	0.87	-2.7
2,423,439	+		AO353_11090	0.87	+1.0
2,423,439	+		AO353_11090	0.87	-1.4
2,423,439	+		AO353_11090	0.87	-2.0
2,423,439	+		AO353_11090	0.87	-3.3
2,423,439	+		AO353_11090	0.87	-0.2
2,423,439	+		AO353_11090	0.87	+0.6
2,423,439	+		AO353_11090	0.87	-0.3
2,423,439	+		AO353_11090	0.87	-0.9
2,423,440	-		AO353_11090	0.87	-2.6
2,423,440	-		AO353_11090	0.87	-1.3
2,423,440	-		AO353_11090	0.87	+0.1
2,423,440	-		AO353_11090	0.87	-0.1
2,423,440	-		AO353_11090	0.87	-0.7
2,423,440	-		AO353_11090	0.87	+0.9
2,423,440	-		AO353_11090	0.87	-1.9
2,423,464	+		AO353_11090	0.89	-0.5
2,423,465	-		AO353_11090	0.89	-0.3
2,423,494	+				-0.8
2,423,494	+				-1.3
2,423,494	+				+1.4
2,423,494	+				-1.9
2,423,494	+				-0.0
2,423,494	+				-3.0
2,423,494	+				-1.3
2,423,494	+				-0.4
2,423,494	+				-1.4
2,423,494	+				-2.4
2,423,494	+				-1.5
2,423,495	-				-1.4
2,423,495	-				-1.5
2,423,495	-				-0.1
2,423,495	-				-1.3
2,423,495	-				-2.1
2,423,495	-				-1.6
2,423,495	-				+0.0
2,423,495	-				-2.2
2,423,495	-				-1.5
2,423,495	-				-0.3
2,423,495	-				-2.1
2,423,495	-				-1.4
2,423,495	-				-0.7
2,423,609	+				-0.7
2,423,609	+				+0.5
2,423,609	+				-0.4
2,423,609	+				-0.7
2,423,610	-				-0.2
2,423,610	-				-0.0
2,423,610	-				+0.4
2,423,610	-				-0.9
2,423,742	+				+0.2
2,423,742	+				+0.6
2,423,742	+				-0.0
2,423,742	+				-1.3
2,423,766	+				-0.9
2,423,766	+				-0.9
2,423,766	+				-0.5
2,423,767	-				-0.4
2,423,806	-				+1.5
2,423,816	+				+0.0
2,423,816	+				+0.5
2,423,831	-				+0.1
2,423,858	+				+0.3
2,423,858	+				-0.3
2,423,858	+				+0.5
2,423,858	+				+0.3
2,423,858	+				-0.5
2,423,859	-				-0.5
2,423,859	-				+0.8
2,423,859	-				+1.0
2,423,859	-				+1.6
2,423,862	+				+0.5
2,423,862	+				+1.8
2,423,863	-				+1.5
2,423,863	-				+0.1
2,423,863	-				+0.5
2,423,954	+				-0.6
2,423,955	-				-1.3
2,423,955	-				+0.4
2,423,955	-				+1.6
2,423,966	-				+1.0
2,423,978	+				-0.8
2,423,978	+				+0.2
2,423,978	+				+0.8
2,423,978	+				+1.6
2,423,979	-				+1.0
2,423,979	-				+0.8
2,423,979	-				+0.5
2,423,979	-				-0.4
2,423,982	+				-0.0
2,423,982	+				+0.1
2,423,982	+				-0.1
2,423,982	+				+0.3
2,423,982	+				+0.8
2,423,982	+				+0.9
2,423,982	+				-1.3
2,423,982	+				+0.9
2,423,982	+				+0.2
2,423,983	-				+0.1
2,423,983	-				+0.1
2,423,983	-				-1.6
2,423,983	-				+1.1
2,423,983	-				+0.8
2,423,983	-				-0.6
2,423,983	-				-0.8
2,423,983	-				+0.9
2,423,983	-				-0.4
2,423,983	-				-0.0
2,423,984	+				-0.6
2,423,984	+				+3.0
2,423,984	+				+0.0
2,423,984	+				-0.2
2,423,984	+				+0.2
2,423,985	-				+0.8
2,423,985	-				+0.0
2,423,985	-				+0.3
2,423,985	-				+1.1
2,423,985	-				+1.7
2,424,011	+				-1.2
2,424,011	+				+0.8
2,424,023	+				+1.0
2,424,023	+				+1.1
2,424,023	+				+0.8
2,424,023	+				-0.9
2,424,023	+				+0.5
2,424,024	-				+0.5
2,424,024	-				+0.7
2,424,024	-				+0.0
2,424,034	-				+0.6
2,424,034	-				+2.8
2,424,048	+				-0.1
2,424,048	+				-0.3
2,424,048	+				-1.5
2,424,048	+				+1.3
2,424,048	+				-0.8
2,424,048	+				-0.0
2,424,048	+				-0.4
2,424,048	+				+0.3
2,424,049	-				+0.1
2,424,049	-				+0.8
2,424,049	-				-1.4
2,424,049	-				+0.8
2,424,049	-				+1.1
2,424,049	-				-0.3
2,424,049	-				+0.2
2,424,055	+				-0.5
2,424,055	+				-0.3
2,424,055	+				+0.5
2,424,055	+				-2.0
2,424,055	+				-1.1
2,424,055	+				-1.6
2,424,055	+				-1.4
2,424,055	+				+0.3
2,424,055	+				+1.2
2,424,055	+				-0.6
2,424,055	+				-2.0
2,424,055	+				+0.6
2,424,056	-				-0.6
2,424,056	-				-0.4
2,424,056	-				+0.9
2,424,056	-				-0.4
2,424,056	-				-0.2
2,424,056	-				+0.6
2,424,056	-				+0.1
2,424,056	-				+0.2
2,424,056	-				+0.6
2,424,056	-				+0.3
2,424,056	-				-0.2
2,424,056	-				-0.6
2,424,056	-				+0.3
2,424,056	-				-0.8
2,424,059	+				+0.4
2,424,059	+				+1.2
2,424,059	+				-0.6
2,424,059	+				-0.0
2,424,059	+				+0.5
2,424,059	+				+1.1
2,424,059	+				-0.7
2,424,059	+				-1.6
2,424,059	+				+0.6
2,424,059	+				+1.2
2,424,060	-				+1.5
2,424,060	-				-1.7
2,424,060	-				-1.1
2,424,060	-				+1.4
2,424,060	-				-0.4
2,424,060	-				+1.8
2,424,060	-				+0.2
2,424,060	-				-0.0
2,424,060	-				+0.5
2,424,060	-				-0.9
2,424,060	-				+0.1
2,424,060	-				+1.0
2,424,060	-				-0.8
2,424,060	-				+2.2
2,424,060	-				+0.0
2,424,060	-				-1.9
2,424,060	-				+0.1
2,424,060	-				+1.4
2,424,097	-				-0.0
2,424,097	-				+0.4
2,424,136	+		AO353_11095	0.13	-0.3
2,424,136	+		AO353_11095	0.13	+0.5
2,424,136	+		AO353_11095	0.13	-0.9
2,424,136	+		AO353_11095	0.13	-0.7
2,424,136	+		AO353_11095	0.13	+1.8
2,424,136	+		AO353_11095	0.13	-1.1
2,424,136	+		AO353_11095	0.13	-0.1
2,424,137	-		AO353_11095	0.13	+0.3
2,424,137	-		AO353_11095	0.13	-0.7
2,424,137	-		AO353_11095	0.13	+1.0
2,424,137	-		AO353_11095	0.13	-0.5
2,424,139	+		AO353_11095	0.13	+1.2
2,424,139	+		AO353_11095	0.13	-1.1
2,424,139	+		AO353_11095	0.13	-0.8
2,424,139	+		AO353_11095	0.13	-2.0
2,424,139	+		AO353_11095	0.13	-0.1
2,424,139	+		AO353_11095	0.13	-0.1
2,424,139	+		AO353_11095	0.13	-0.9
2,424,139	+		AO353_11095	0.13	-2.0
2,424,139	+		AO353_11095	0.13	-0.7
2,424,139	+		AO353_11095	0.13	+0.2
2,424,140	-		AO353_11095	0.13	+0.0
2,424,140	-		AO353_11095	0.13	+0.3
2,424,140	-		AO353_11095	0.13	+0.4
2,424,140	-		AO353_11095	0.13	+2.0
2,424,140	-		AO353_11095	0.13	-0.3
2,424,140	-		AO353_11095	0.13	+0.2
2,424,140	-		AO353_11095	0.13	+0.5
2,424,140	-		AO353_11095	0.13	+1.0
2,424,231	+		AO353_11095	0.23	-1.2
2,424,231	+		AO353_11095	0.23	-0.9
2,424,231	+		AO353_11095	0.23	-0.5
2,424,231	+		AO353_11095	0.23	-0.1
2,424,231	+		AO353_11095	0.23	-1.1
2,424,231	+		AO353_11095	0.23	-0.5
2,424,232	-		AO353_11095	0.23	+0.6
2,424,232	-		AO353_11095	0.23	+0.7
2,424,232	-		AO353_11095	0.23	+0.6
2,424,232	-		AO353_11095	0.23	+0.0
2,424,232	-		AO353_11095	0.23	-0.3
2,424,233	+		AO353_11095	0.23	-1.6
2,424,233	+		AO353_11095	0.23	+0.3
2,424,234	-		AO353_11095	0.23	+1.2
2,424,234	-		AO353_11095	0.23	-0.9
2,424,234	-		AO353_11095	0.23	-0.4
2,424,273	+		AO353_11095	0.28	+0.2
2,424,273	+		AO353_11095	0.28	-1.2
2,424,273	+		AO353_11095	0.28	-0.4
2,424,273	+		AO353_11095	0.28	-1.2
2,424,273	+		AO353_11095	0.28	+0.3
2,424,273	+		AO353_11095	0.28	-0.5
2,424,274	-		AO353_11095	0.28	+0.9
2,424,274	-		AO353_11095	0.28	+0.4
2,424,274	-		AO353_11095	0.28	+0.5
2,424,274	-		AO353_11095	0.28	+0.3
2,424,274	-		AO353_11095	0.28	-0.5
2,424,274	-		AO353_11095	0.28	+2.3
2,424,274	-		AO353_11095	0.28	-0.3
2,424,274	-		AO353_11095	0.28	+1.2
2,424,346	+		AO353_11095	0.36	+0.3
2,424,347	-		AO353_11095	0.36	-0.4
2,424,370	-		AO353_11095	0.38	-0.9
2,424,420	+		AO353_11095	0.44	+0.2
2,424,420	+		AO353_11095	0.44	-0.8
2,424,420	+		AO353_11095	0.44	-0.9
2,424,420	+		AO353_11095	0.44	+1.5
2,424,421	-		AO353_11095	0.44	+0.5
2,424,421	-		AO353_11095	0.44	-0.9
2,424,421	-		AO353_11095	0.44	+1.1
2,424,421	-		AO353_11095	0.44	-1.0
2,424,502	+		AO353_11095	0.53	+0.2
2,424,502	+		AO353_11095	0.53	+0.4
2,424,502	+		AO353_11095	0.53	-2.0
2,424,503	-		AO353_11095	0.53	+0.2
2,424,503	-		AO353_11095	0.53	+1.6
2,424,503	-		AO353_11095	0.53	+0.8
2,424,503	-		AO353_11095	0.53	+0.7
2,424,503	-		AO353_11095	0.53	-0.1