Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07710

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
1,698,033	-		AO353_07705	0.62	-1.5
1,698,078	-		AO353_07705	0.64	-1.3
1,698,146	+		AO353_07705	0.67	-2.3
1,698,146	+		AO353_07705	0.67	-2.2
1,698,146	+		AO353_07705	0.67	-2.2
1,698,146	+		AO353_07705	0.67	-2.0
1,698,146	+		AO353_07705	0.67	-3.2
1,698,147	-		AO353_07705	0.68	-3.5
1,698,147	-		AO353_07705	0.68	+0.7
1,698,147	-		AO353_07705	0.68	-1.0
1,698,147	-		AO353_07705	0.68	-1.6
1,698,147	-		AO353_07705	0.68	-3.2
1,698,442	+		AO353_07705	0.83	-1.2
1,698,443	-		AO353_07705	0.83	-1.4
1,698,443	-		AO353_07705	0.83	-1.8
1,698,443	-		AO353_07705	0.83	-1.8
1,698,510	-		AO353_07705	0.86	-2.9
1,698,595	+				-2.5
1,698,595	+				-1.7
1,698,595	+				+0.8
1,698,595	+				-2.3
1,698,595	+				-1.8
1,698,595	+				-3.4
1,698,595	+				-0.4
1,698,595	+				-1.6
1,698,595	+				-2.0
1,698,595	+				-0.8
1,698,595	+				-3.2
1,698,595	+				-0.2
1,698,595	+				-2.6
1,698,595	+				-3.1
1,698,596	-				-0.4
1,698,596	-				-1.5
1,698,596	-				-2.6
1,698,596	-				-1.4
1,698,596	-				-1.6
1,698,596	-				-1.7
1,698,596	-				-1.7
1,698,596	-				-1.7
1,698,596	-				-3.3
1,698,596	-				-2.2
1,698,612	+				-0.8
1,698,612	+				+0.0
1,698,612	+				-1.8
1,698,612	+				-1.1
1,698,612	+				-1.9
1,698,613	-				-1.9
1,698,634	+				-2.4
1,698,634	+				+0.9
1,698,634	+				-1.5
1,698,634	+				-2.0
1,698,635	-				-1.6
1,698,635	-				+0.8
1,698,775	-				-0.7
1,698,836	-				-0.1
1,698,836	-				-1.4
1,698,836	-				+0.9
1,698,836	-				-1.1
1,698,836	-				+0.3
1,698,836	-				+0.2
1,698,836	-				+0.5
1,698,898	+				-1.5
1,698,898	+				-2.3
1,698,898	+				-1.2
1,698,898	+				-1.0
1,698,899	-				-1.1
1,698,899	-				-0.7
1,698,899	-				+0.2
1,698,899	-				-0.2
1,698,899	-				-0.2
1,698,899	-				-1.0
1,698,899	-				-0.5
1,698,907	+				-0.2
1,698,907	+				-2.6
1,698,907	+				-1.6
1,698,907	+				-2.8
1,698,907	+				-1.4
1,698,907	+				+2.4
1,698,907	+				-3.4
1,698,908	-				+0.7
1,698,908	-				-0.5
1,698,908	-				-0.7
1,698,908	-				-1.7
1,698,908	-				+0.6
1,698,908	-				+0.4
1,698,908	-				-0.7
1,698,908	-				-0.7
1,698,982	+				-3.4
1,698,982	+				-1.1
1,698,982	+				-3.0
1,698,982	+				-2.3
1,698,983	-				-0.6
1,698,983	-				+2.1
1,698,983	-				-1.8
1,698,983	-				+1.2
1,698,983	-				-0.7
1,698,983	-				+0.6
1,699,021	+				-3.0
1,699,021	+				-1.8
1,699,022	-				-1.3
1,699,041	-				-1.3
1,699,041	-				-2.8
1,699,178	-				-2.7
1,699,180	+				-2.0
1,699,180	+				-3.7
1,699,181	-				+0.0
1,699,255	+		AO353_07710	0.13	-3.3
1,699,297	+		AO353_07710	0.15	-1.6
1,699,345	+		AO353_07710	0.17	-0.8
1,699,360	+		AO353_07710	0.18	-1.1
1,699,360	+		AO353_07710	0.18	-1.5
1,699,360	+		AO353_07710	0.18	-1.4
1,699,360	+		AO353_07710	0.18	-2.4
1,699,360	+		AO353_07710	0.18	-1.1
1,699,360	+		AO353_07710	0.18	-1.4
1,699,360	+		AO353_07710	0.18	-3.6
1,699,360	+		AO353_07710	0.18	-1.8
1,699,360	+		AO353_07710	0.18	-1.2
1,699,361	-		AO353_07710	0.18	-2.4
1,699,361	-		AO353_07710	0.18	-0.8
1,699,361	-		AO353_07710	0.18	-2.9
1,699,361	-		AO353_07710	0.18	+0.5
1,699,376	+		AO353_07710	0.19	-2.6
1,699,377	-		AO353_07710	0.19	-1.6
1,699,377	-		AO353_07710	0.19	-2.8
1,699,377	-		AO353_07710	0.19	-2.3
1,699,447	+		AO353_07710	0.22	-2.9
1,699,447	+		AO353_07710	0.22	-1.2
1,699,448	-		AO353_07710	0.22	-1.2
1,699,448	-		AO353_07710	0.22	+0.0
1,699,448	-		AO353_07710	0.22	-2.1
1,699,489	+		AO353_07710	0.24	-3.1
1,699,489	+		AO353_07710	0.24	-1.8
1,699,489	+		AO353_07710	0.24	-3.4
1,699,489	+		AO353_07710	0.24	-0.8
1,699,490	-		AO353_07710	0.24	-2.0
1,699,490	-		AO353_07710	0.24	-1.5
1,699,490	-		AO353_07710	0.24	-3.7
1,699,760	+		AO353_07710	0.37	-1.1
1,699,827	+		AO353_07710	0.41	-3.2
1,699,877	+		AO353_07710	0.43	-2.2
1,699,877	+		AO353_07710	0.43	-2.3
1,699,877	+		AO353_07710	0.43	-1.8
1,699,878	-		AO353_07710	0.43	-1.2
1,699,878	-		AO353_07710	0.43	-3.2
1,699,878	-		AO353_07710	0.43	-1.5
1,699,924	+		AO353_07710	0.45	-0.7
1,699,924	+		AO353_07710	0.45	-3.4
1,699,924	+		AO353_07710	0.45	-1.9
1,699,924	+		AO353_07710	0.45	-2.2
1,699,924	+		AO353_07710	0.45	-2.1
1,699,924	+		AO353_07710	0.45	-2.7
1,699,924	+		AO353_07710	0.45	-4.3
1,699,924	+		AO353_07710	0.45	-3.4
1,699,925	-		AO353_07710	0.45	-0.7
1,699,925	-		AO353_07710	0.45	-1.9
1,699,925	-		AO353_07710	0.45	-1.3
1,699,925	-		AO353_07710	0.45	+1.0
1,699,925	-		AO353_07710	0.45	-2.4
1,699,925	-		AO353_07710	0.45	-2.5
1,699,925	-		AO353_07710	0.45	-3.2
1,699,925	-		AO353_07710	0.45	-1.6
1,699,925	-		AO353_07710	0.45	-4.6
1,699,993	+		AO353_07710	0.49	+0.3
1,699,993	+		AO353_07710	0.49	+0.0
1,699,993	+		AO353_07710	0.49	-3.5
1,699,993	+		AO353_07710	0.49	-0.5
1,699,993	+		AO353_07710	0.49	-0.7
1,699,993	+		AO353_07710	0.49	-3.2
1,699,993	+		AO353_07710	0.49	-1.6
1,699,993	+		AO353_07710	0.49	-0.5
1,699,993	+		AO353_07710	0.49	-3.0
1,699,993	+		AO353_07710	0.49	-1.5
1,699,993	+		AO353_07710	0.49	-2.8
1,699,994	-		AO353_07710	0.49	-4.0
1,699,994	-		AO353_07710	0.49	-2.2
1,699,994	-		AO353_07710	0.49	-3.7
1,699,994	-		AO353_07710	0.49	+1.5
1,699,994	-		AO353_07710	0.49	-1.5
1,699,994	-		AO353_07710	0.49	-1.1
1,699,994	-		AO353_07710	0.49	-1.6
1,699,994	-		AO353_07710	0.49	-0.5
1,700,101	+		AO353_07710	0.54	-0.4
1,700,102	-		AO353_07710	0.54	-2.2
1,700,117	+		AO353_07710	0.55	-3.2
1,700,117	+		AO353_07710	0.55	-1.4
1,700,117	+		AO353_07710	0.55	-1.4
1,700,117	+		AO353_07710	0.55	-2.2
1,700,117	+		AO353_07710	0.55	-3.0
1,700,117	+		AO353_07710	0.55	-0.5
1,700,118	-		AO353_07710	0.55	-1.8
1,700,118	-		AO353_07710	0.55	-2.7
1,700,118	-		AO353_07710	0.55	-0.9
1,700,118	-		AO353_07710	0.55	-2.7
1,700,118	-		AO353_07710	0.55	-1.8
1,700,221	+		AO353_07710	0.60	-0.4
1,700,314	+		AO353_07710	0.64	-2.7
1,700,314	+		AO353_07710	0.64	-2.9
1,700,314	+		AO353_07710	0.64	-2.5
1,700,315	-		AO353_07710	0.64	-1.7
1,700,315	-		AO353_07710	0.64	-0.4
1,700,315	-		AO353_07710	0.64	-1.3
1,700,317	+		AO353_07710	0.64	-1.6
1,700,317	+		AO353_07710	0.64	-1.4
1,700,317	+		AO353_07710	0.64	-3.0
1,700,318	-		AO353_07710	0.64	-1.5
1,700,318	-		AO353_07710	0.64	-2.9
1,700,318	-		AO353_07710	0.64	+0.4
1,700,381	+		AO353_07710	0.67	-0.7
1,700,381	+		AO353_07710	0.67	-1.8
1,700,382	-		AO353_07710	0.68	-0.5
1,700,417	+		AO353_07710	0.69	-2.7
1,700,418	-		AO353_07710	0.69	-1.6
1,700,487	-		AO353_07710	0.73	-0.8
1,700,596	+		AO353_07710	0.78	-3.2
1,700,597	-		AO353_07710	0.78	-2.4
1,700,917	+				-0.5
1,700,917	+				-0.7
1,700,917	+				-3.0
1,700,917	+				-2.6
1,700,917	+				-2.7
1,700,917	+				-2.7
1,700,917	+				-0.5
1,700,918	-				-0.5
1,700,918	-				-1.9
1,700,918	-				-1.5
1,700,918	-				-3.6
1,700,918	-				-1.0
1,700,918	-				-1.1
1,700,918	-				-3.6
1,700,920	+				-1.1
1,700,920	+				-0.4
1,700,920	+				-0.4
1,700,920	+				-3.4
1,700,920	+				-2.2
1,700,921	-				-3.3
1,700,921	-				-3.6
1,700,930	-				-2.2
1,700,962	+				-1.8
1,701,067	+				-2.3
1,701,067	+				-1.1
1,701,067	+				-3.2
1,701,068	-				-3.2
1,701,068	-				-1.5
1,701,121	+		AO353_07715	0.10	-2.8
1,701,121	+		AO353_07715	0.10	-0.7
1,701,122	-		AO353_07715	0.11	-2.5
1,701,122	-		AO353_07715	0.11	-0.5
1,701,208	+		AO353_07715	0.27	-1.2
1,701,208	+		AO353_07715	0.27	-3.3
1,701,208	+		AO353_07715	0.27	-2.2
1,701,208	+		AO353_07715	0.27	-2.0
1,701,208	+		AO353_07715	0.27	-1.6
1,701,208	+		AO353_07715	0.27	-2.2
1,701,209	-		AO353_07715	0.27	-0.4
1,701,209	-		AO353_07715	0.27	-2.1
1,701,209	-		AO353_07715	0.27	-2.8
1,701,209	-		AO353_07715	0.27	-1.7
1,701,209	-		AO353_07715	0.27	-2.8
1,701,209	-		AO353_07715	0.27	-1.8
1,701,235	+		AO353_07715	0.32	-2.1
1,701,242	-		AO353_07715	0.33	-0.2
1,701,242	-		AO353_07715	0.33	-2.8
1,701,242	-		AO353_07715	0.33	-0.8
1,701,346	+		AO353_07715	0.53	-0.5
1,701,346	+		AO353_07715	0.53	-0.7
1,701,347	-		AO353_07715	0.53	-1.1
1,701,347	-		AO353_07715	0.53	-3.0
1,701,347	-		AO353_07715	0.53	-1.8
1,701,347	-		AO353_07715	0.53	-2.3
1,701,347	-		AO353_07715	0.53	-2.3
1,701,347	-		AO353_07715	0.53	+1.0
1,701,422	-		AO353_07715	0.67	-1.5
1,701,433	+		AO353_07715	0.69	-1.8
1,701,433	+		AO353_07715	0.69	+0.3
1,701,433	+		AO353_07715	0.69	-1.9
1,701,434	-		AO353_07715	0.69	-3.2
1,701,434	-		AO353_07715	0.69	-0.7
1,701,434	-		AO353_07715	0.69	-2.5
1,701,434	-		AO353_07715	0.69	-1.5
1,701,448	+		AO353_07715	0.72	-3.0
1,701,449	-		AO353_07715	0.72	-2.0
1,701,514	+		AO353_07715	0.84	-1.9
1,701,514	+		AO353_07715	0.84	-1.3
1,701,514	+		AO353_07715	0.84	-1.8
1,701,514	+		AO353_07715	0.84	-0.2
1,701,514	+		AO353_07715	0.84	-1.3
1,701,514	+		AO353_07715	0.84	-2.2
1,701,514	+		AO353_07715	0.84	-1.3
1,701,514	+		AO353_07715	0.84	-2.0
1,701,514	+		AO353_07715	0.84	-2.3
1,701,514	+		AO353_07715	0.84	-0.4
1,701,515	-		AO353_07715	0.85	-0.8
1,701,515	-		AO353_07715	0.85	-0.2
1,701,515	-		AO353_07715	0.85	-0.8
1,701,515	-		AO353_07715	0.85	-1.9
1,701,515	-		AO353_07715	0.85	-1.0
1,701,515	-		AO353_07715	0.85	-2.4
1,701,515	-		AO353_07715	0.85	-1.1
1,701,515	-		AO353_07715	0.85	-0.2
1,701,515	-		AO353_07715	0.85	-2.4
1,701,515	-		AO353_07715	0.85	-0.4
1,701,515	-		AO353_07715	0.85	-2.3
1,701,515	-		AO353_07715	0.85	-2.1
1,701,605	-				-1.6
1,701,605	-				-0.8
1,701,605	-				-1.5
1,701,667	+				-1.0
1,701,668	-				-0.9
1,701,668	-				-1.1
1,701,677	+				-3.1
1,701,677	+				-2.2
1,701,678	-				+1.0
1,701,678	-				-0.2
1,701,736	+				-1.4
1,701,737	-				-0.8
1,701,852	-		AO353_07720	0.18	-1.0
1,701,873	-		AO353_07720	0.20	-2.5
1,701,954	-		AO353_07720	0.28	-1.6
1,701,954	-		AO353_07720	0.28	-1.0
1,701,954	-		AO353_07720	0.28	-3.0
1,701,954	-		AO353_07720	0.28	-0.2
1,701,954	-		AO353_07720	0.28	-2.7
1,701,972	-		AO353_07720	0.30	-0.8
1,701,993	+		AO353_07720	0.32	-3.1
1,701,994	-		AO353_07720	0.33	-1.0