Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07675

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
1,689,891	+		AO353_07670	0.44	+0.3
1,689,891	+		AO353_07670	0.44	+0.5
1,689,891	+		AO353_07670	0.44	-0.2
1,689,892	-		AO353_07670	0.44	-0.3
1,689,892	-		AO353_07670	0.44	-0.5
1,689,892	-		AO353_07670	0.44	+0.2
1,689,892	-		AO353_07670	0.44	+0.3
1,689,892	-		AO353_07670	0.44	+0.9
1,689,892	-		AO353_07670	0.44	+1.6
1,689,892	-		AO353_07670	0.44	-0.6
1,689,892	-		AO353_07670	0.44	-1.1
1,689,892	-		AO353_07670	0.44	-0.6
1,689,892	-		AO353_07670	0.44	+0.5
1,689,892	-		AO353_07670	0.44	-0.0
1,690,233	+		AO353_07670	0.76	-0.6
1,690,233	+		AO353_07670	0.76	-0.1
1,690,233	+		AO353_07670	0.76	-0.5
1,690,297	+		AO353_07670	0.83	+1.3
1,690,371	+		AO353_07670	0.90	-0.2
1,690,371	+		AO353_07670	0.90	+0.0
1,690,371	+		AO353_07670	0.90	-0.6
1,690,371	+		AO353_07670	0.90	+0.2
1,690,371	+		AO353_07670	0.90	-0.4
1,690,371	+		AO353_07670	0.90	-1.3
1,690,371	+		AO353_07670	0.90	+0.5
1,690,371	+		AO353_07670	0.90	-0.4
1,690,372	-		AO353_07670	0.90	-0.8
1,690,372	-		AO353_07670	0.90	+0.0
1,690,372	-		AO353_07670	0.90	+1.2
1,690,372	-		AO353_07670	0.90	+1.0
1,690,372	-		AO353_07670	0.90	-1.3
1,690,372	-		AO353_07670	0.90	-2.6
1,690,373	+		AO353_07670	0.90	+1.9
1,690,373	+		AO353_07670	0.90	+1.5
1,690,373	+		AO353_07670	0.90	+0.0
1,690,373	+		AO353_07670	0.90	+0.1
1,690,373	+		AO353_07670	0.90	-0.1
1,690,373	+		AO353_07670	0.90	-0.2
1,690,374	-		AO353_07670	0.90	+0.3
1,690,374	-		AO353_07670	0.90	+1.1
1,690,374	-		AO353_07670	0.90	+1.8
1,690,426	+				+0.0
1,690,426	+				+0.0
1,690,426	+				-0.2
1,690,476	+				+0.4
1,690,477	-				-0.3
1,690,479	+				-1.0
1,690,479	+				+0.4
1,690,480	-				-0.5
1,690,548	+				-1.0
1,690,548	+				+0.4
1,690,670	+				+1.0
1,690,671	-				-0.0
1,690,671	-				-1.8
1,690,671	-				+0.1
1,690,671	-				+0.0
1,690,671	-				+0.3
1,690,707	+				+1.1
1,690,707	+				-0.0
1,690,707	+				+0.1
1,690,707	+				-0.6
1,690,707	+				-1.8
1,690,707	+				+0.3
1,690,708	-				+0.8
1,690,708	-				-1.1
1,690,708	-				-2.5
1,690,708	-				+1.0
1,690,721	+				-2.2
1,690,721	+				-1.1
1,690,721	+				-2.3
1,690,721	+				-2.1
1,690,721	+				-3.0
1,690,721	+				-1.1
1,690,721	+				-2.3
1,690,721	+				-2.7
1,690,722	-				-2.1
1,690,722	-				-2.9
1,690,722	-				-1.5
1,690,722	-				-1.4
1,690,722	-				-2.7
1,690,722	-				-0.0
1,690,722	-				+0.6
1,690,722	-				-1.5
1,690,722	-				-1.3
1,690,722	-				-2.4
1,690,758	+				-2.3
1,690,758	+				-1.0
1,690,758	+				-2.1
1,690,758	+				-0.9
1,690,758	+				-1.8
1,690,758	+				-1.1
1,690,759	-				-1.6
1,690,759	-				-1.2
1,690,759	-				-2.1
1,690,759	-				-2.9
1,690,759	-				-1.1
1,690,759	-				-1.2
1,690,759	-				-2.1
1,690,759	-				-2.4
1,690,759	-				-1.7
1,690,829	+		AO353_07675	0.11	+0.2
1,690,830	-		AO353_07675	0.11	-0.5
1,690,974	-		AO353_07675	0.24	-2.3
1,691,044	+		AO353_07675	0.31	-3.7
1,691,044	+		AO353_07675	0.31	-2.3
1,691,044	+		AO353_07675	0.31	-2.0
1,691,045	-		AO353_07675	0.31	-1.9
1,691,045	-		AO353_07675	0.31	-0.4
1,691,121	+		AO353_07675	0.38	-2.7
1,691,121	+		AO353_07675	0.38	-2.1
1,691,121	+		AO353_07675	0.38	-0.4
1,691,121	+		AO353_07675	0.38	-1.4
1,691,121	+		AO353_07675	0.38	-2.6
1,691,121	+		AO353_07675	0.38	-3.5
1,691,121	+		AO353_07675	0.38	-1.9
1,691,122	-		AO353_07675	0.38	-3.2
1,691,122	-		AO353_07675	0.38	-3.2
1,691,122	-		AO353_07675	0.38	-2.9
1,691,122	-		AO353_07675	0.38	-0.7
1,691,188	+		AO353_07675	0.44	-2.8
1,691,188	+		AO353_07675	0.44	-2.2
1,691,188	+		AO353_07675	0.44	-3.0
1,691,189	-		AO353_07675	0.44	-3.4
1,691,189	-		AO353_07675	0.44	-2.8
1,691,189	-		AO353_07675	0.44	-0.6
1,691,189	-		AO353_07675	0.44	-2.7
1,691,189	-		AO353_07675	0.44	-2.2
1,691,189	-		AO353_07675	0.44	-0.9
1,691,200	-		AO353_07675	0.45	-1.9
1,691,267	-		AO353_07675	0.51	+0.0
1,691,267	-		AO353_07675	0.51	-2.2
1,691,304	+		AO353_07675	0.54	-2.6
1,691,304	+		AO353_07675	0.54	-1.4
1,691,304	+		AO353_07675	0.54	-2.7
1,691,304	+		AO353_07675	0.54	-2.2
1,691,304	+		AO353_07675	0.54	+0.6
1,691,304	+		AO353_07675	0.54	-0.4
1,691,305	-		AO353_07675	0.54	-1.2
1,691,305	-		AO353_07675	0.54	-2.4
1,691,305	-		AO353_07675	0.54	-2.8
1,691,305	-		AO353_07675	0.54	-1.1
1,691,305	-		AO353_07675	0.54	-1.5
1,691,305	-		AO353_07675	0.54	-2.3
1,691,305	-		AO353_07675	0.54	+0.0
1,691,305	-		AO353_07675	0.54	-2.7
1,691,305	-		AO353_07675	0.54	-1.0
1,691,305	-		AO353_07675	0.54	+0.3
1,691,338	+		AO353_07675	0.57	-1.4
1,691,339	-		AO353_07675	0.57	-1.6
1,691,370	+		AO353_07675	0.60	-0.4
1,691,370	+		AO353_07675	0.60	-1.5
1,691,370	+		AO353_07675	0.60	+0.0
1,691,371	-		AO353_07675	0.60	-1.0
1,691,371	-		AO353_07675	0.60	-2.6
1,691,371	-		AO353_07675	0.60	-2.1
1,691,424	+		AO353_07675	0.65	-2.3
1,691,424	+		AO353_07675	0.65	-2.6
1,691,424	+		AO353_07675	0.65	-1.2
1,691,424	+		AO353_07675	0.65	-1.6
1,691,424	+		AO353_07675	0.65	+0.0
1,691,458	+		AO353_07675	0.68	-0.7
1,691,544	-		AO353_07675	0.76	-3.7
1,691,571	+		AO353_07675	0.79	-1.5
1,691,571	+		AO353_07675	0.79	+0.2
1,691,601	+		AO353_07675	0.81	-2.6
1,691,601	+		AO353_07675	0.81	-0.8
1,691,601	+		AO353_07675	0.81	-3.9
1,691,601	+		AO353_07675	0.81	-3.7
1,691,602	-		AO353_07675	0.81	-1.8
1,691,602	-		AO353_07675	0.81	-0.6
1,691,797	+				-3.2
1,691,797	+				-1.8
1,691,797	+				-2.8
1,691,797	+				-2.1
1,691,798	-				-2.7
1,691,873	+				-2.3
1,691,873	+				-1.8
1,691,873	+				-3.0
1,691,873	+				-1.6
1,691,873	+				-0.8
1,691,873	+				-2.9
1,691,873	+				-1.2
1,691,873	+				-2.2
1,691,873	+				-2.1
1,691,873	+				-3.0
1,691,873	+				+0.6
1,691,873	+				-3.2
1,691,873	+				-2.5
1,691,873	+				-2.9
1,691,873	+				-2.8
1,691,874	-				-1.3
1,691,874	-				-0.2
1,691,874	-				+0.0
1,691,874	-				-1.3
1,691,874	-				-0.4
1,691,874	-				-0.3
1,691,874	-				-0.4
1,691,874	-				-0.2
1,691,874	-				-1.8
1,691,874	-				-2.3
1,691,874	-				+0.2
1,691,877	+				-0.8
1,691,877	+				-1.8
1,691,877	+				-2.1
1,691,877	+				-1.4
1,691,877	+				-2.2
1,691,877	+				-3.7
1,691,877	+				-2.0
1,691,878	-				-0.2
1,691,878	-				-0.7
1,691,878	-				-0.7
1,691,878	-				+0.5
1,691,878	-				+0.8
1,691,878	-				-0.8
1,691,878	-				-1.8
1,691,881	+				-1.7
1,691,881	+				-1.6
1,691,881	+				-1.0
1,691,881	+				-2.8
1,691,882	-				-0.9
1,691,882	-				+1.5
1,691,882	-				-1.1
1,691,882	-				-0.1
1,691,894	+				-3.3
1,691,894	+				-2.7
1,691,894	+				-0.4
1,691,894	+				-4.2
1,691,894	+				-1.5
1,691,894	+				-1.4
1,691,894	+				-2.1
1,691,894	+				-3.3
1,691,895	-				+0.0
1,691,895	-				-1.2
1,691,895	-				-1.7
1,691,895	-				-1.4
1,691,895	-				-0.4
1,691,895	-				-0.7
1,691,895	-				+0.2
1,691,898	+				-1.1
1,692,008	+				-1.3
1,692,008	+				+0.4
1,692,008	+				-1.0
1,692,009	-				-1.8
1,692,009	-				-2.7
1,692,009	-				-0.4
1,692,050	+				-2.7
1,692,051	-				-1.8
1,692,083	+				-2.7
1,692,083	+				-1.7
1,692,083	+				-1.6
1,692,083	+				-1.0
1,692,083	+				-2.6
1,692,083	+				-3.7
1,692,084	-				-3.8
1,692,084	-				-1.6
1,692,084	-				-2.1
1,692,104	-				-2.7
1,692,175	+				-2.9
1,692,175	+				-2.4
1,692,176	-				-0.7
1,692,176	-				-1.4
1,692,201	-				-1.2
1,692,201	-				-0.7
1,692,299	+		AO353_07680	0.16	-3.5
1,692,299	+		AO353_07680	0.16	-3.0
1,692,299	+		AO353_07680	0.16	-3.4
1,692,299	+		AO353_07680	0.16	-1.6
1,692,299	+		AO353_07680	0.16	-2.0
1,692,299	+		AO353_07680	0.16	-2.7
1,692,299	+		AO353_07680	0.16	-3.7
1,692,300	-		AO353_07680	0.16	-1.9
1,692,300	-		AO353_07680	0.16	-2.7
1,692,300	-		AO353_07680	0.16	-3.1
1,692,300	-		AO353_07680	0.16	-1.5
1,692,300	-		AO353_07680	0.16	-0.0
1,692,337	-		AO353_07680	0.19	-0.7
1,692,446	+		AO353_07680	0.28	-0.4
1,692,461	+		AO353_07680	0.29	-3.8
1,692,461	+		AO353_07680	0.29	-2.1
1,692,461	+		AO353_07680	0.29	-1.7
1,692,461	+		AO353_07680	0.29	-1.5
1,692,462	-		AO353_07680	0.29	-1.5
1,692,462	-		AO353_07680	0.29	-0.2
1,692,462	-		AO353_07680	0.29	-2.0
1,692,462	-		AO353_07680	0.29	-1.9
1,692,462	-		AO353_07680	0.29	-1.1
1,692,462	-		AO353_07680	0.29	-0.2
1,692,566	+		AO353_07680	0.37	-1.5
1,692,567	-		AO353_07680	0.37	-2.5
1,692,567	-		AO353_07680	0.37	-2.6
1,692,567	-		AO353_07680	0.37	-0.3
1,692,632	+		AO353_07680	0.42	-1.1
1,692,632	+		AO353_07680	0.42	-2.7
1,692,632	+		AO353_07680	0.42	-0.9
1,692,632	+		AO353_07680	0.42	-1.6
1,692,632	+		AO353_07680	0.42	-1.8
1,692,632	+		AO353_07680	0.42	-0.7
1,692,632	+		AO353_07680	0.42	-2.4
1,692,632	+		AO353_07680	0.42	-2.0
1,692,632	+		AO353_07680	0.42	-0.8
1,692,632	+		AO353_07680	0.42	-1.6
1,692,632	+		AO353_07680	0.42	-1.6
1,692,632	+		AO353_07680	0.42	-1.6
1,692,632	+		AO353_07680	0.42	-2.5
1,692,632	+		AO353_07680	0.42	-1.1
1,692,632	+		AO353_07680	0.42	-1.3
1,692,632	+		AO353_07680	0.42	-2.9
1,692,632	+		AO353_07680	0.42	-1.6
1,692,632	+		AO353_07680	0.42	-2.8
1,692,633	-		AO353_07680	0.42	-2.3
1,692,633	-		AO353_07680	0.42	-1.2
1,692,633	-		AO353_07680	0.42	-2.1
1,692,633	-		AO353_07680	0.42	-1.0
1,692,633	-		AO353_07680	0.42	-2.9
1,692,633	-		AO353_07680	0.42	-0.6
1,692,633	-		AO353_07680	0.42	-0.3
1,692,633	-		AO353_07680	0.42	-1.5
1,692,633	-		AO353_07680	0.42	-0.8
1,692,633	-		AO353_07680	0.42	-3.5
1,692,644	+		AO353_07680	0.43	-3.5
1,692,645	-		AO353_07680	0.43	-0.2
1,692,645	-		AO353_07680	0.43	-3.1
1,692,735	-		AO353_07680	0.50	+0.3