Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07660

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
1,685,645	+		AO353_07650	0.84	-1.9
1,685,645	+		AO353_07650	0.84	-2.1
1,685,645	+		AO353_07650	0.84	-0.2
1,685,645	+		AO353_07650	0.84	-1.4
1,685,645	+		AO353_07650	0.84	+0.2
1,685,645	+		AO353_07650	0.84	-0.6
1,685,646	-		AO353_07650	0.84	-1.5
1,685,646	-		AO353_07650	0.84	-0.6
1,685,646	-		AO353_07650	0.84	-2.0
1,685,646	-		AO353_07650	0.84	-1.8
1,685,646	-		AO353_07650	0.84	-3.1
1,685,646	-		AO353_07650	0.84	+1.3
1,685,646	-		AO353_07650	0.84	-2.1
1,685,651	+		AO353_07650	0.84	-1.1
1,685,651	+		AO353_07650	0.84	-2.9
1,685,651	+		AO353_07650	0.84	-1.2
1,685,651	+		AO353_07650	0.84	-4.3
1,685,651	+		AO353_07650	0.84	-0.2
1,685,651	+		AO353_07650	0.84	-0.9
1,685,651	+		AO353_07650	0.84	-2.1
1,685,651	+		AO353_07650	0.84	-2.7
1,685,652	-		AO353_07650	0.84	-1.5
1,685,652	-		AO353_07650	0.84	-1.8
1,685,652	-		AO353_07650	0.84	-2.0
1,685,652	-		AO353_07650	0.84	-2.0
1,685,652	-		AO353_07650	0.84	-2.4
1,685,652	-		AO353_07650	0.84	-1.7
1,685,652	-		AO353_07650	0.84	-2.2
1,685,652	-		AO353_07650	0.84	-3.6
1,685,652	-		AO353_07650	0.84	-1.2
1,685,652	-		AO353_07650	0.84	-2.1
1,685,700	+		AO353_07650	0.85	+0.0
1,685,701	-		AO353_07650	0.85	-3.1
1,685,701	-		AO353_07650	0.85	-0.7
1,685,708	+		AO353_07650	0.86	-2.2
1,685,708	+		AO353_07650	0.86	-1.2
1,685,708	+		AO353_07650	0.86	-2.8
1,685,708	+		AO353_07650	0.86	-4.2
1,685,708	+		AO353_07650	0.86	-2.0
1,685,708	+		AO353_07650	0.86	+0.0
1,685,708	+		AO353_07650	0.86	-3.3
1,685,708	+		AO353_07650	0.86	-1.6
1,685,709	-		AO353_07650	0.86	-3.9
1,685,709	-		AO353_07650	0.86	-2.0
1,685,709	-		AO353_07650	0.86	-2.8
1,685,709	-		AO353_07650	0.86	+1.2
1,685,709	-		AO353_07650	0.86	+0.3
1,685,709	-		AO353_07650	0.86	+0.8
1,685,709	-		AO353_07650	0.86	-0.7
1,685,717	+		AO353_07650	0.86	+1.4
1,685,717	+		AO353_07650	0.86	-2.0
1,685,717	+		AO353_07650	0.86	-3.2
1,685,717	+		AO353_07650	0.86	-0.4
1,685,718	-		AO353_07650	0.86	-1.4
1,685,741	+		AO353_07650	0.87	-1.9
1,685,741	+		AO353_07650	0.87	-2.3
1,685,756	+		AO353_07650	0.87	-1.0
1,685,756	+		AO353_07650	0.87	-1.5
1,685,756	+		AO353_07650	0.87	-1.9
1,685,756	+		AO353_07650	0.87	-1.6
1,685,757	-		AO353_07650	0.87	-1.0
1,685,757	-		AO353_07650	0.87	-2.5
1,685,821	+		AO353_07650	0.89	-3.1
1,685,822	-		AO353_07650	0.89	-1.3
1,685,847	+				-3.3
1,685,864	+				-2.1
1,685,864	+				-1.7
1,685,865	-				-2.2
1,685,893	-				-0.4
1,685,981	+				-2.9
1,685,982	-				-1.7
1,685,982	-				-2.2
1,685,982	-				-1.8
1,686,059	+				-2.2
1,686,059	+				-2.1
1,686,059	+				+1.6
1,686,059	+				-1.3
1,686,060	-				-2.5
1,686,060	-				+0.3
1,686,060	-				-2.4
1,686,060	-				-2.4
1,686,141	+				-2.4
1,686,142	-				-0.2
1,686,142	-				-1.1
1,686,142	-				-3.0
1,686,142	-				-2.3
1,686,142	-				-1.0
1,686,142	-				+1.4
1,686,220	+		AO353_07655	0.25	-0.7
1,686,220	+		AO353_07655	0.25	-2.1
1,686,220	+		AO353_07655	0.25	-1.8
1,686,221	-		AO353_07655	0.25	-1.6
1,686,221	-		AO353_07655	0.25	-1.3
1,686,238	+		AO353_07655	0.30	-1.1
1,686,238	+		AO353_07655	0.30	-2.2
1,686,238	+		AO353_07655	0.30	-0.6
1,686,238	+		AO353_07655	0.30	-2.9
1,686,238	+		AO353_07655	0.30	-1.5
1,686,238	+		AO353_07655	0.30	-2.6
1,686,239	-		AO353_07655	0.31	-3.3
1,686,239	-		AO353_07655	0.31	-1.2
1,686,268	+		AO353_07655	0.39	-2.1
1,686,268	+		AO353_07655	0.39	-3.7
1,686,268	+		AO353_07655	0.39	-2.1
1,686,268	+		AO353_07655	0.39	-1.8
1,686,269	-		AO353_07655	0.40	-2.2
1,686,269	-		AO353_07655	0.40	-2.5
1,686,324	-		AO353_07655	0.56	-2.8
1,686,340	+		AO353_07655	0.61	-2.6
1,686,340	+		AO353_07655	0.61	-1.0
1,686,340	+		AO353_07655	0.61	+0.0
1,686,340	+		AO353_07655	0.61	-3.2
1,686,340	+		AO353_07655	0.61	-1.7
1,686,340	+		AO353_07655	0.61	-0.4
1,686,340	+		AO353_07655	0.61	-1.7
1,686,340	+		AO353_07655	0.61	-1.2
1,686,340	+		AO353_07655	0.61	-1.5
1,686,340	+		AO353_07655	0.61	-2.9
1,686,340	+		AO353_07655	0.61	-2.0
1,686,340	+		AO353_07655	0.61	-1.4
1,686,340	+		AO353_07655	0.61	-1.0
1,686,340	+		AO353_07655	0.61	-2.2
1,686,340	+		AO353_07655	0.61	-0.6
1,686,340	+		AO353_07655	0.61	-2.6
1,686,340	+		AO353_07655	0.61	-1.7
1,686,340	+		AO353_07655	0.61	-2.3
1,686,340	+		AO353_07655	0.61	-2.5
1,686,341	-		AO353_07655	0.62	-0.4
1,686,341	-		AO353_07655	0.62	-1.7
1,686,341	-		AO353_07655	0.62	-2.1
1,686,341	-		AO353_07655	0.62	-1.4
1,686,341	-		AO353_07655	0.62	-2.0
1,686,341	-		AO353_07655	0.62	-1.5
1,686,341	-		AO353_07655	0.62	-1.1
1,686,341	-		AO353_07655	0.62	-1.2
1,686,341	-		AO353_07655	0.62	-1.3
1,686,341	-		AO353_07655	0.62	-2.9
1,686,467	+				-2.8
1,686,467	+				-1.5
1,686,467	+				-2.3
1,686,467	+				+0.3
1,686,467	+				-2.9
1,686,467	+				-2.6
1,686,467	+				-1.4
1,686,468	-				-1.6
1,686,468	-				-1.2
1,686,468	-				-1.5
1,686,468	-				-2.9
1,686,468	-				-0.8
1,686,468	-				-2.3
1,686,483	+				-2.1
1,686,842	-		AO353_07660	0.29	-2.7
1,686,885	+		AO353_07660	0.32	-1.9
1,686,885	+		AO353_07660	0.32	-3.5
1,686,885	+		AO353_07660	0.32	-2.5
1,686,885	+		AO353_07660	0.32	-1.8
1,686,885	+		AO353_07660	0.32	-1.8
1,686,886	-		AO353_07660	0.32	-3.0
1,686,886	-		AO353_07660	0.32	-2.5
1,686,886	-		AO353_07660	0.32	-1.8
1,686,886	-		AO353_07660	0.32	-3.8
1,686,894	-		AO353_07660	0.33	-2.9
1,687,082	+		AO353_07660	0.48	-1.1
1,687,082	+		AO353_07660	0.48	-2.4
1,687,082	+		AO353_07660	0.48	-2.0
1,687,083	-		AO353_07660	0.48	-1.0
1,687,083	-		AO353_07660	0.48	-3.3
1,687,377	+		AO353_07660	0.72	-3.6
1,687,377	+		AO353_07660	0.72	-2.1
1,687,377	+		AO353_07660	0.72	-0.2
1,687,378	-		AO353_07660	0.72	-3.0
1,687,378	-		AO353_07660	0.72	-1.6
1,687,407	+		AO353_07660	0.74	-1.3
1,687,407	+		AO353_07660	0.74	-1.8
1,687,407	+		AO353_07660	0.74	-1.6
1,687,407	+		AO353_07660	0.74	-2.9
1,687,408	-		AO353_07660	0.74	-3.2
1,687,408	-		AO353_07660	0.74	+0.0
1,687,408	-		AO353_07660	0.74	-1.5
1,687,408	-		AO353_07660	0.74	-1.5
1,687,408	-		AO353_07660	0.74	-1.2
1,687,408	-		AO353_07660	0.74	-2.2
1,687,408	-		AO353_07660	0.74	+0.3
1,687,408	-		AO353_07660	0.74	+0.3
1,687,455	+		AO353_07660	0.78	-1.4
1,687,456	-		AO353_07660	0.78	-0.6
1,687,456	-		AO353_07660	0.78	-2.7
1,687,482	+		AO353_07660	0.80	-1.0
1,687,482	+		AO353_07660	0.80	-0.4
1,687,482	+		AO353_07660	0.80	-2.6
1,687,482	+		AO353_07660	0.80	-1.3
1,687,483	-		AO353_07660	0.80	-0.6
1,687,584	+		AO353_07660	0.88	-3.0
1,687,584	+		AO353_07660	0.88	-1.5
1,687,584	+		AO353_07660	0.88	-1.9
1,687,584	+		AO353_07660	0.88	+0.0
1,687,585	-		AO353_07660	0.88	-1.9
1,687,585	-		AO353_07660	0.88	-1.6
1,687,585	-		AO353_07660	0.88	-1.8
1,687,585	-		AO353_07660	0.88	-2.7
1,687,585	-		AO353_07660	0.88	-1.6
1,687,585	-		AO353_07660	0.88	-3.1
1,687,585	-		AO353_07660	0.88	+0.6
1,687,585	-		AO353_07660	0.88	-1.2
1,687,587	+		AO353_07660	0.88	-1.3
1,687,587	+		AO353_07660	0.88	-1.8
1,687,587	+		AO353_07660	0.88	-1.6
1,687,587	+		AO353_07660	0.88	-2.1
1,687,587	+		AO353_07660	0.88	-0.1
1,687,635	+				-2.3
1,687,723	-				-2.2
1,687,732	+				-1.2
1,687,732	+				-1.5
1,687,732	+				-1.2
1,687,732	+				-1.3
1,687,732	+				-1.1
1,687,733	-				-0.8
1,687,733	-				-2.2
1,687,740	+				-1.3
1,687,740	+				-2.2
1,687,741	-				-2.9
1,687,764	-				-1.5
1,687,888	-		AO353_07665	0.11	-1.6
1,688,083	+		AO353_07665	0.26	-1.0
1,688,083	+		AO353_07665	0.26	-3.1
1,688,083	+		AO353_07665	0.26	-1.5
1,688,083	+		AO353_07665	0.26	+1.5
1,688,083	+		AO353_07665	0.26	-1.3
1,688,083	+		AO353_07665	0.26	-2.5
1,688,083	+		AO353_07665	0.26	-2.7
1,688,083	+		AO353_07665	0.26	-1.3
1,688,083	+		AO353_07665	0.26	-2.7
1,688,083	+		AO353_07665	0.26	-2.1
1,688,083	+		AO353_07665	0.26	-2.8
1,688,083	+		AO353_07665	0.26	-1.1
1,688,083	+		AO353_07665	0.26	-1.6
1,688,083	+		AO353_07665	0.26	-1.9
1,688,084	-		AO353_07665	0.26	-1.1
1,688,084	-		AO353_07665	0.26	-0.8
1,688,084	-		AO353_07665	0.26	-0.1
1,688,084	-		AO353_07665	0.26	-0.2
1,688,084	-		AO353_07665	0.26	-2.1
1,688,084	-		AO353_07665	0.26	-1.5
1,688,084	-		AO353_07665	0.26	-1.4
1,688,084	-		AO353_07665	0.26	-0.1
1,688,084	-		AO353_07665	0.26	-2.6
1,688,151	-		AO353_07665	0.31	-1.3
1,688,151	-		AO353_07665	0.31	-3.1
1,688,151	-		AO353_07665	0.31	-0.6
1,688,369	+		AO353_07665	0.49	+0.6
1,688,477	+		AO353_07665	0.57	-2.3
1,688,477	+		AO353_07665	0.57	-2.6
1,688,478	-		AO353_07665	0.58	-3.0
1,688,478	-		AO353_07665	0.58	-0.3
1,688,478	-		AO353_07665	0.58	-3.0
1,688,478	-		AO353_07665	0.58	-2.3
1,688,544	-		AO353_07665	0.63	-0.2
1,688,591	+		AO353_07665	0.67	-1.6
1,688,591	+		AO353_07665	0.67	-2.1
1,688,591	+		AO353_07665	0.67	-1.0
1,688,591	+		AO353_07665	0.67	-2.6
1,688,591	+		AO353_07665	0.67	-3.6
1,688,592	-		AO353_07665	0.67	-1.6
1,688,592	-		AO353_07665	0.67	-2.5
1,688,592	-		AO353_07665	0.67	-0.4
1,688,664	+		AO353_07665	0.72	-3.4
1,688,664	+		AO353_07665	0.72	-1.8
1,688,664	+		AO353_07665	0.72	-0.7
1,688,664	+		AO353_07665	0.72	-0.7
1,688,664	+		AO353_07665	0.72	-0.6
1,688,664	+		AO353_07665	0.72	-1.2
1,688,664	+		AO353_07665	0.72	-0.7
1,688,664	+		AO353_07665	0.72	-1.7
1,688,664	+		AO353_07665	0.72	-1.8
1,688,665	-		AO353_07665	0.72	-1.5
1,688,665	-		AO353_07665	0.72	-3.7
1,688,693	+		AO353_07665	0.75	-1.9
1,688,693	+		AO353_07665	0.75	-1.1
1,688,693	+		AO353_07665	0.75	-1.0
1,688,693	+		AO353_07665	0.75	-2.6
1,688,693	+		AO353_07665	0.75	-3.1
1,688,694	-		AO353_07665	0.75	-2.6