Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06570

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
1,462,134	+		AO353_06565	0.49	+0.2
1,462,134	+		AO353_06565	0.49	-1.0
1,462,134	+		AO353_06565	0.49	-1.2
1,462,134	+		AO353_06565	0.49	-1.0
1,462,135	-		AO353_06565	0.49	-0.3
1,462,135	-		AO353_06565	0.49	+0.5
1,462,135	-		AO353_06565	0.49	+0.3
1,462,135	-		AO353_06565	0.49	+0.9
1,462,135	-		AO353_06565	0.49	-0.8
1,462,135	-		AO353_06565	0.49	-0.3
1,462,135	-		AO353_06565	0.49	-0.3
1,462,135	-		AO353_06565	0.49	-1.8
1,462,135	-		AO353_06565	0.49	-0.9
1,462,150	+		AO353_06565	0.50	-0.8
1,462,150	+		AO353_06565	0.50	+0.3
1,462,150	+		AO353_06565	0.50	+0.6
1,462,151	-		AO353_06565	0.50	-0.1
1,462,151	-		AO353_06565	0.50	+0.4
1,462,151	-		AO353_06565	0.50	+0.7
1,462,151	-		AO353_06565	0.50	+0.2
1,462,489	+		AO353_06565	0.75	+0.9
1,462,489	+		AO353_06565	0.75	+1.9
1,462,489	+		AO353_06565	0.75	+0.2
1,462,489	+		AO353_06565	0.75	-0.8
1,462,490	-		AO353_06565	0.75	+1.9
1,462,490	-		AO353_06565	0.75	+0.5
1,462,490	-		AO353_06565	0.75	-0.3
1,462,490	-		AO353_06565	0.75	+0.2
1,462,490	-		AO353_06565	0.75	+0.5
1,462,490	-		AO353_06565	0.75	+0.2
1,462,490	-		AO353_06565	0.75	+0.2
1,462,490	-		AO353_06565	0.75	-0.1
1,462,573	+		AO353_06565	0.81	+0.1
1,462,573	+		AO353_06565	0.81	-0.2
1,462,573	+		AO353_06565	0.81	-2.5
1,462,573	+		AO353_06565	0.81	-0.0
1,462,573	+		AO353_06565	0.81	+0.6
1,462,573	+		AO353_06565	0.81	-1.9
1,462,573	+		AO353_06565	0.81	+0.5
1,462,573	+		AO353_06565	0.81	-1.5
1,462,573	+		AO353_06565	0.81	+0.3
1,462,573	+		AO353_06565	0.81	-1.8
1,462,574	-		AO353_06565	0.81	+0.4
1,462,574	-		AO353_06565	0.81	-0.4
1,462,574	-		AO353_06565	0.81	+0.6
1,462,574	-		AO353_06565	0.81	-0.8
1,462,574	-		AO353_06565	0.81	+0.5
1,462,574	-		AO353_06565	0.81	-0.5
1,462,574	-		AO353_06565	0.81	+0.5
1,462,574	-		AO353_06565	0.81	-0.9
1,462,574	-		AO353_06565	0.81	-1.1
1,462,574	-		AO353_06565	0.81	-0.1
1,462,574	-		AO353_06565	0.81	-1.6
1,462,574	-		AO353_06565	0.81	-0.4
1,462,574	-		AO353_06565	0.81	-0.1
1,462,574	-		AO353_06565	0.81	-1.4
1,462,574	-		AO353_06565	0.81	-0.7
1,462,574	-		AO353_06565	0.81	-0.4
1,462,574	-		AO353_06565	0.81	-0.2
1,462,574	-		AO353_06565	0.81	-1.5
1,462,719	+				+1.4
1,462,719	+				+2.5
1,462,719	+				-0.6
1,462,719	+				-0.1
1,462,720	-				-1.4
1,462,720	-				+1.4
1,462,768	+				-0.4
1,462,768	+				-0.8
1,462,768	+				+0.9
1,462,768	+				-0.8
1,462,768	+				+0.0
1,462,768	+				-0.8
1,462,768	+				+0.6
1,462,769	-				+0.6
1,462,769	-				-0.2
1,462,769	-				+1.3
1,462,769	-				-1.5
1,462,769	-				+0.3
1,462,769	-				-0.9
1,462,769	-				+0.4
1,462,769	-				+1.6
1,462,769	-				-0.3
1,462,822	-				-0.7
1,462,988	+				-0.5
1,462,988	+				-1.2
1,462,988	+				+1.3
1,462,989	-				-0.7
1,462,989	-				-0.5
1,462,989	-				-1.0
1,462,989	-				+0.5
1,462,989	-				-0.1
1,462,989	-				-0.1
1,462,989	-				+1.0
1,463,048	+				-1.2
1,463,562	-		AO353_06570	0.39	+0.0
1,463,562	-		AO353_06570	0.39	-0.3
1,463,562	-		AO353_06570	0.39	-1.0
1,463,819	+		AO353_06570	0.58	+0.5
1,463,820	-		AO353_06570	0.58	-0.8
1,463,820	-		AO353_06570	0.58	-1.1
1,463,820	-		AO353_06570	0.58	+1.0
1,463,820	-		AO353_06570	0.58	+1.3
1,463,820	-		AO353_06570	0.58	+0.3
1,463,870	+		AO353_06570	0.62	-1.7
1,463,870	+		AO353_06570	0.62	+0.5
1,463,870	+		AO353_06570	0.62	+0.2
1,463,870	+		AO353_06570	0.62	-0.3
1,463,870	+		AO353_06570	0.62	+1.4
1,463,870	+		AO353_06570	0.62	-0.1
1,463,871	-		AO353_06570	0.62	+0.4
1,463,871	-		AO353_06570	0.62	-0.7
1,463,871	-		AO353_06570	0.62	+0.7
1,463,871	-		AO353_06570	0.62	+1.5
1,463,871	-		AO353_06570	0.62	+0.1
1,463,871	-		AO353_06570	0.62	+0.5
1,463,952	-		AO353_06570	0.67	-0.7
1,464,017	+		AO353_06570	0.72	+0.5
1,464,017	+		AO353_06570	0.72	+0.0
1,464,018	-		AO353_06570	0.72	+0.1
1,464,023	+		AO353_06570	0.72	-1.9
1,464,023	+		AO353_06570	0.72	-0.2
1,464,023	+		AO353_06570	0.72	-0.6
1,464,023	+		AO353_06570	0.72	+0.9
1,464,023	+		AO353_06570	0.72	+0.8
1,464,023	+		AO353_06570	0.72	-0.2
1,464,023	+		AO353_06570	0.72	-0.3
1,464,023	+		AO353_06570	0.72	-1.0
1,464,024	-		AO353_06570	0.73	-0.0
1,464,024	-		AO353_06570	0.73	-2.9
1,464,024	-		AO353_06570	0.73	+0.5
1,464,024	-		AO353_06570	0.73	-0.5
1,464,024	-		AO353_06570	0.73	+0.9
1,464,024	-		AO353_06570	0.73	+0.1
1,464,024	-		AO353_06570	0.73	+0.0
1,464,110	+		AO353_06570	0.79	+0.7
1,464,110	+		AO353_06570	0.79	+1.6
1,464,110	+		AO353_06570	0.79	+0.5
1,464,111	-		AO353_06570	0.79	+1.8
1,464,112	+		AO353_06570	0.79	-1.8
1,464,112	+		AO353_06570	0.79	+1.4
1,464,112	+		AO353_06570	0.79	-1.4
1,464,112	+		AO353_06570	0.79	+0.6
1,464,112	+		AO353_06570	0.79	+0.9
1,464,112	+		AO353_06570	0.79	+0.2
1,464,112	+		AO353_06570	0.79	+0.6
1,464,112	+		AO353_06570	0.79	-0.2
1,464,113	-		AO353_06570	0.79	+0.2
1,464,113	-		AO353_06570	0.79	-0.5
1,464,113	-		AO353_06570	0.79	+0.2
1,464,113	-		AO353_06570	0.79	+0.4
1,464,113	-		AO353_06570	0.79	-0.4
1,464,113	-		AO353_06570	0.79	-0.5
1,464,113	-		AO353_06570	0.79	+0.2
1,464,227	+		AO353_06570	0.87	+0.7
1,464,227	+		AO353_06570	0.87	+0.7
1,464,227	+		AO353_06570	0.87	+0.4
1,464,228	-		AO353_06570	0.87	+1.4
1,464,258	-		AO353_06570	0.89	-0.6
1,464,316	+				+0.6
1,464,316	+				-0.8
1,464,316	+				+1.3
1,464,316	+				+0.7
1,464,316	+				+0.1
1,464,316	+				-0.1
1,464,316	+				+0.2
1,464,316	+				+0.3
1,464,316	+				-0.8
1,464,317	-				+0.6
1,464,317	-				-1.0
1,464,317	-				-0.1
1,464,317	-				+1.0
1,464,317	-				+1.3
1,464,317	-				-0.1
1,464,317	-				-1.1
1,464,317	-				-1.0
1,464,317	-				+1.3
1,464,317	-				-0.7
1,464,317	-				+0.5
1,464,317	-				+0.5
1,464,408	+				-1.8
1,464,408	+				-0.5
1,464,408	+				+0.5
1,464,408	+				+2.8
1,464,408	+				-0.5
1,464,409	-				-0.3
1,464,409	-				+0.2
1,464,409	-				-1.4
1,464,409	-				+1.7
1,464,409	-				+0.0
1,464,423	+				+2.1
1,464,424	-				-0.2
1,464,424	-				-0.1
1,464,499	-				+0.5
1,464,510	+		AO353_06575	0.11	+0.9
1,464,510	+		AO353_06575	0.11	-0.7
1,464,510	+		AO353_06575	0.11	+1.3
1,464,511	-		AO353_06575	0.11	-0.4
1,464,667	+		AO353_06575	0.30	-0.3
1,464,667	+		AO353_06575	0.30	-0.2
1,464,667	+		AO353_06575	0.30	-1.2
1,464,668	-		AO353_06575	0.30	+1.5
1,464,668	-		AO353_06575	0.30	+0.4
1,464,668	-		AO353_06575	0.30	-1.7
1,464,668	-		AO353_06575	0.30	-1.4
1,464,668	-		AO353_06575	0.30	+0.9
1,464,668	-		AO353_06575	0.30	-1.6
1,465,000	+		AO353_06575	0.71	+0.3
1,465,000	+		AO353_06575	0.71	+0.7
1,465,001	-		AO353_06575	0.71	-0.5
1,465,001	-		AO353_06575	0.71	-1.0
1,465,009	+		AO353_06575	0.72	-1.9
1,465,009	+		AO353_06575	0.72	+1.4
1,465,009	+		AO353_06575	0.72	+0.1
1,465,009	+		AO353_06575	0.72	+0.4
1,465,010	-		AO353_06575	0.72	+0.3
1,465,010	-		AO353_06575	0.72	+0.6
1,465,010	-		AO353_06575	0.72	+1.8
1,465,010	-		AO353_06575	0.72	+0.2
1,465,010	-		AO353_06575	0.72	-0.8
1,465,011	+		AO353_06575	0.72	-0.1
1,465,012	-		AO353_06575	0.72	+0.8
1,465,050	+		AO353_06575	0.77	+1.0
1,465,050	+		AO353_06575	0.77	+0.6
1,465,050	+		AO353_06575	0.77	-0.5
1,465,050	+		AO353_06575	0.77	-0.1
1,465,051	-		AO353_06575	0.77	-0.0
1,465,051	-		AO353_06575	0.77	-0.3
1,465,051	-		AO353_06575	0.77	+0.0
1,465,051	-		AO353_06575	0.77	-3.0
1,465,051	-		AO353_06575	0.77	-0.3
1,465,051	-		AO353_06575	0.77	-2.1
1,465,081	+		AO353_06575	0.80	-0.5
1,465,081	+		AO353_06575	0.80	+0.5
1,465,081	+		AO353_06575	0.80	-0.1
1,465,081	+		AO353_06575	0.80	+0.4
1,465,081	+		AO353_06575	0.80	+0.2
1,465,081	+		AO353_06575	0.80	+1.9
1,465,082	-		AO353_06575	0.80	+2.1
1,465,082	-		AO353_06575	0.80	+0.4
1,465,082	-		AO353_06575	0.80	+1.5
1,465,082	-		AO353_06575	0.80	+0.5
1,465,082	-		AO353_06575	0.80	-0.4
1,465,108	+		AO353_06575	0.84	-2.1
1,465,108	+		AO353_06575	0.84	+1.7
1,465,108	+		AO353_06575	0.84	+0.2
1,465,108	+		AO353_06575	0.84	+0.6
1,465,108	+		AO353_06575	0.84	-0.2
1,465,109	-		AO353_06575	0.84	-0.4
1,465,109	-		AO353_06575	0.84	-0.7
1,465,109	-		AO353_06575	0.84	-0.7
1,465,109	-		AO353_06575	0.84	+2.7
1,465,109	-		AO353_06575	0.84	-0.2
1,465,179	+				+0.5
1,465,179	+				-1.9
1,465,188	+				+1.4
1,465,188	+				-0.8
1,465,189	-				-0.1
1,465,203	+				+0.9
1,465,204	-				+1.1
1,465,221	-				+0.2
1,465,221	-				+0.2
1,465,248	-				+0.7
1,465,325	-				+1.0
1,465,347	-				-0.4
1,465,347	-				-0.5
1,465,350	+				+0.3
1,465,350	+				+1.0
1,465,350	+				+2.2
1,465,350	+				+1.3
1,465,350	+				-1.5
1,465,350	+				+0.6
1,465,351	-				+0.8
1,465,351	-				-0.5
1,465,351	-				-1.2
1,465,351	-				+0.4
1,465,351	-				-1.4
1,465,368	+				+0.5
1,465,368	+				-0.4
1,465,369	-				+0.3
1,465,369	-				-0.7
1,465,369	-				-0.1
1,465,369	-				-0.5
1,465,369	-				+0.7
1,465,381	-				+0.3
1,465,381	-				-0.9