Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0207 and BT0208 are separated by 17 nucleotides BT0208 and BT0209 are separated by 17 nucleotides BT0209 and BT0210 are separated by 45 nucleotides
BT0207: BT0207 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 225,665 to 227,200
BT0207
BT0208: BT0208 - hypothetical protein (NCBI ptt file), at 227,218 to 228,117
BT0208
BT0209: BT0209 - hypothetical protein (NCBI ptt file), at 228,135 to 230,087
BT0209
BT0210: BT0210 - leucine-rich repeat protein, function unknown (NCBI ptt file), at 230,133 to 232,847
BT0210
Position (kb) 228
229
230
231 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 227.234 kb on + strand at 227.264 kb on + strand at 227.531 kb on + strand, within BT0208 at 227.538 kb on + strand, within BT0208 at 227.620 kb on + strand, within BT0208 at 227.763 kb on - strand, within BT0208 at 227.804 kb on - strand, within BT0208 at 227.915 kb on - strand, within BT0208 at 227.954 kb on - strand, within BT0208 at 227.956 kb on - strand, within BT0208 at 227.995 kb on + strand, within BT0208 at 228.019 kb on - strand, within BT0208 at 228.035 kb on - strand at 228.263 kb on + strand at 228.495 kb on - strand, within BT0209 at 228.505 kb on + strand, within BT0209 at 228.858 kb on + strand, within BT0209 at 228.905 kb on + strand, within BT0209 at 228.909 kb on - strand, within BT0209 at 228.986 kb on + strand, within BT0209 at 229.016 kb on + strand, within BT0209 at 229.049 kb on - strand, within BT0209 at 229.052 kb on - strand, within BT0209 at 229.087 kb on - strand, within BT0209 at 229.152 kb on - strand, within BT0209 at 229.152 kb on - strand, within BT0209 at 229.164 kb on + strand, within BT0209 at 229.238 kb on + strand, within BT0209 at 229.293 kb on + strand, within BT0209 at 229.357 kb on + strand, within BT0209 at 229.404 kb on - strand, within BT0209 at 229.411 kb on - strand, within BT0209 at 229.413 kb on - strand, within BT0209 at 229.446 kb on + strand, within BT0209 at 229.597 kb on + strand, within BT0209 at 229.606 kb on - strand, within BT0209 at 229.732 kb on + strand, within BT0209 at 229.733 kb on - strand, within BT0209 at 229.737 kb on - strand, within BT0209 at 229.764 kb on - strand, within BT0209 at 229.779 kb on - strand, within BT0209 at 229.794 kb on - strand, within BT0209 at 229.797 kb on + strand, within BT0209 at 229.892 kb on - strand at 229.892 kb on - strand at 230.067 kb on - strand at 230.082 kb on - strand at 230.140 kb on + strand at 230.245 kb on - strand at 230.251 kb on - strand at 230.269 kb on - strand at 230.270 kb on + strand at 230.406 kb on + strand, within BT0210 at 230.438 kb on + strand, within BT0210 at 230.466 kb on - strand, within BT0210 at 230.558 kb on - strand, within BT0210 at 230.642 kb on + strand, within BT0210 at 230.754 kb on + strand, within BT0210 at 230.816 kb on - strand, within BT0210 at 230.822 kb on - strand, within BT0210 at 230.863 kb on - strand, within BT0210 at 230.880 kb on - strand, within BT0210 at 231.028 kb on - strand, within BT0210 at 231.081 kb on + strand, within BT0210 at 231.082 kb on - strand, within BT0210
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 227,234 + -1.0 227,264 + +0.2 227,531 + BT0208 0.35 +1.9 227,538 + BT0208 0.36 +0.4 227,620 + BT0208 0.45 -0.4 227,763 - BT0208 0.61 +2.4 227,804 - BT0208 0.65 +0.4 227,915 - BT0208 0.77 -0.4 227,954 - BT0208 0.82 -0.4 227,956 - BT0208 0.82 +1.6 227,995 + BT0208 0.86 -1.2 228,019 - BT0208 0.89 -0.4 228,035 - -1.7 228,263 + +0.6 228,495 - BT0209 0.18 -0.7 228,505 + BT0209 0.19 +1.6 228,858 + BT0209 0.37 -1.9 228,905 + BT0209 0.39 -2.1 228,909 - BT0209 0.40 -0.4 228,986 + BT0209 0.44 -0.1 229,016 + BT0209 0.45 -0.0 229,049 - BT0209 0.47 +1.0 229,052 - BT0209 0.47 +1.7 229,087 - BT0209 0.49 -1.1 229,152 - BT0209 0.52 +1.0 229,152 - BT0209 0.52 -0.7 229,164 + BT0209 0.53 +1.7 229,238 + BT0209 0.56 -0.0 229,293 + BT0209 0.59 +0.3 229,357 + BT0209 0.63 -1.6 229,404 - BT0209 0.65 +0.3 229,411 - BT0209 0.65 -0.4 229,413 - BT0209 0.65 +2.2 229,446 + BT0209 0.67 -2.6 229,597 + BT0209 0.75 +0.3 229,606 - BT0209 0.75 -1.2 229,732 + BT0209 0.82 +0.7 229,733 - BT0209 0.82 -1.4 229,737 - BT0209 0.82 -0.6 229,764 - BT0209 0.83 -0.9 229,779 - BT0209 0.84 -2.8 229,794 - BT0209 0.85 -0.2 229,797 + BT0209 0.85 -1.6 229,892 - -0.4 229,892 - -2.1 230,067 - -1.2 230,082 - +1.3 230,140 + -1.5 230,245 - -1.2 230,251 - -1.2 230,269 - -0.4 230,270 + +0.6 230,406 + BT0210 0.10 -1.0 230,438 + BT0210 0.11 +0.1 230,466 - BT0210 0.12 -1.1 230,558 - BT0210 0.16 -0.0 230,642 + BT0210 0.19 -0.5 230,754 + BT0210 0.23 -0.4 230,816 - BT0210 0.25 -0.7 230,822 - BT0210 0.25 -1.6 230,863 - BT0210 0.27 -2.2 230,880 - BT0210 0.28 -0.5 231,028 - BT0210 0.33 +1.0 231,081 + BT0210 0.35 -2.5 231,082 - BT0210 0.35 +1.6
Or see this region's nucleotide sequence