Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37115

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,788,955	+		RR42_RS37105	0.48	+0.0
3,788,955	+		RR42_RS37105	0.48	-1.0
3,788,956	-		RR42_RS37105	0.49	-0.4
3,789,088	+				-0.0
3,789,088	+				-0.8
3,789,089	-				-2.5
3,789,139	+				+1.0
3,789,140	-				+0.1
3,789,140	-				+1.2
3,789,140	-				+0.9
3,789,160	-				-0.7
3,789,459	+		RR42_RS37110	0.73	+0.6
3,789,459	+		RR42_RS37110	0.73	-1.0
3,789,459	+		RR42_RS37110	0.73	-0.1
3,789,460	-		RR42_RS37110	0.74	+0.8
3,789,530	+		RR42_RS37110	0.89	+0.5
3,789,599	+				-0.3
3,789,624	+				+0.1
3,789,624	+				+0.3
3,789,624	+				-2.0
3,789,681	+				+0.3
3,789,681	+				-0.1
3,789,681	+				+0.0
3,789,681	+				-2.6
3,789,813	-				-0.2
3,789,831	+				+0.6
3,789,863	+				-0.2
3,789,863	+				+0.1
3,789,863	+				-0.1
3,789,864	-				-0.2
3,789,864	-				+0.3
3,789,886	+				+0.1
3,789,886	+				-0.2
3,789,887	-				-0.1
3,790,011	-		RR42_RS37115	0.68	-0.8
3,790,121	+				-0.1
3,790,121	+				-1.4
3,790,127	+				-0.4
3,790,127	+				-0.3
3,790,128	-				+0.5
3,790,210	+		RR42_RS37120	0.19	-0.6
3,790,211	-		RR42_RS37120	0.19	-0.8
3,790,211	-		RR42_RS37120	0.19	+0.2
3,790,360	+		RR42_RS37120	0.54	-2.1
3,790,361	-		RR42_RS37120	0.54	-0.4
3,790,361	-		RR42_RS37120	0.54	+1.6
3,790,361	-		RR42_RS37120	0.54	+0.2
3,790,438	-		RR42_RS37120	0.72	+0.5
3,790,438	-		RR42_RS37120	0.72	-1.7
3,790,493	-		RR42_RS37120	0.84	-0.6
3,790,515	-		RR42_RS37120	0.90	+0.2
3,790,523	+				-0.2
3,790,523	+				-1.1
3,790,540	+				+0.3
3,790,540	+				-0.0
3,790,541	-				+0.2
3,790,541	-				-1.1
3,790,541	-				+0.2
3,790,541	-				-0.2
3,790,557	+				+0.4
3,790,561	+				+0.5
3,790,561	+				+0.6
3,790,561	+				+0.1
3,790,578	+				+1.2
3,790,578	+				-0.5
3,790,578	+				-0.6
3,790,578	+				-0.8
3,790,579	-				+0.2
3,790,579	-				+0.4
3,790,594	+				+0.2
3,790,660	+				-0.3
3,790,661	-				-0.2
3,790,689	+				-0.0
3,790,689	+				-1.3
3,790,690	-				-0.2
3,790,690	-				-1.5
3,790,810	+				-0.3
3,790,813	-				-0.8
3,790,813	-				+0.4
3,790,868	-				+0.3
3,790,943	-				-0.3