Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35805

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,478,726	-		RR42_RS35795	0.74	-0.1
3,478,726	-		RR42_RS35795	0.74	-0.5
3,478,780	-		RR42_RS35795	0.80	-1.8
3,479,248	-		RR42_RS35800	0.44	-0.8
3,479,438	+		RR42_RS35800	0.83	-0.3
3,479,439	-		RR42_RS35800	0.83	-0.0
3,479,452	+		RR42_RS35800	0.85	+0.7
3,479,453	-		RR42_RS35800	0.86	-0.3
3,479,667	-				+0.8
3,480,254	-		RR42_RS35805	0.35	+1.0
3,480,254	-		RR42_RS35805	0.35	-0.1
3,480,516	-		RR42_RS35805	0.48	+1.6
3,480,516	-		RR42_RS35805	0.48	+0.8
3,481,345	-		RR42_RS35805	0.89	+0.6
3,481,422	+				+0.2
3,481,423	-				+0.8
3,481,423	-				-0.3
3,481,544	+				+1.1
3,481,545	-				-0.2
3,481,558	-				+0.3
3,481,575	+				+0.1
3,481,575	+				-0.1
3,481,575	+				+3.8
3,481,576	-				+0.5
3,481,576	-				+0.5
3,481,576	-				+0.3
3,482,010	+		RR42_RS35810	0.37	+0.4
3,482,011	-		RR42_RS35810	0.37	-0.2
3,482,011	-		RR42_RS35810	0.37	+0.4
3,482,024	+		RR42_RS35810	0.38	+0.6
3,482,025	-		RR42_RS35810	0.38	-0.7
3,482,026	+		RR42_RS35810	0.38	+0.5
3,482,027	-		RR42_RS35810	0.38	-0.8
3,482,027	-		RR42_RS35810	0.38	-0.3
3,482,047	+		RR42_RS35810	0.40	+0.3
3,482,135	+		RR42_RS35810	0.49	-0.1
3,482,135	+		RR42_RS35810	0.49	+1.5
3,482,136	-		RR42_RS35810	0.49	-0.1
3,482,137	+		RR42_RS35810	0.49	-2.2
3,482,138	-		RR42_RS35810	0.49	-1.8