Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35235

Experiment: R2A with D-Cycloserine 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.01 mg/ml
3,356,929	+				-0.5
3,356,929	+				-0.8
3,356,930	-				-1.4
3,356,930	-				-0.4
3,356,930	-				-0.1
3,357,031	-				+0.9
3,357,315	+		RR42_RS35230	0.36	+0.0
3,357,315	+		RR42_RS35230	0.36	-0.5
3,357,315	+		RR42_RS35230	0.36	+0.3
3,357,315	+		RR42_RS35230	0.36	+0.9
3,357,315	+		RR42_RS35230	0.36	-0.3
3,357,316	-		RR42_RS35230	0.36	+0.1
3,357,316	-		RR42_RS35230	0.36	+0.9
3,357,316	-		RR42_RS35230	0.36	+0.2
3,357,316	-		RR42_RS35230	0.36	-0.1
3,357,316	-		RR42_RS35230	0.36	-1.0
3,357,603	+		RR42_RS35230	0.67	-0.9
3,358,022	+		RR42_RS35235	0.11	-0.2
3,358,223	+		RR42_RS35235	0.32	-0.7
3,358,358	+		RR42_RS35235	0.46	-0.9
3,358,469	+		RR42_RS35235	0.58	-0.4
3,358,859	+				-0.4
3,358,859	+				+1.2
3,358,859	+				-0.5
3,358,860	-				+0.1
3,358,860	-				+1.1
3,358,860	-				+0.6
3,359,160	-				+0.5
3,359,160	-				+0.1
3,359,160	-				+0.3
3,359,160	-				-0.3
3,359,160	-				+0.1
3,359,173	-				+1.5
3,359,173	-				+0.3
3,359,173	-				+1.9
3,359,400	+				+0.2
3,359,400	+				+0.1
3,359,401	-				+0.1
3,359,668	-		RR42_RS35240	0.31	-0.2
3,359,869	+		RR42_RS35240	0.49	-0.7